Array 1 864821-864056 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063079.1 Campylobacter peloridis strain 2016D-0074 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 864820 36 88.9 30 AA.AG............................... TAAAGAAACTTTGGAAGCTACAGCACATAT 864754 36 100.0 30 .................................... AGCCAAATCAAACTGCAAAGCTTATCAAAG 864688 36 100.0 30 .................................... TAAATCAGTTTGTGTAAGGCGTGTGATTAT 864622 36 100.0 30 .................................... GATAATCATAAGCTTTTAAAGAAGTTGAAA 864556 36 100.0 30 .................................... TATTGCAGAGTTAGCTGAAAAACTTGCTTA 864490 36 100.0 30 .................................... TGAAGTTAAAGTTAGTGCAAAAGGCGTTTT 864424 36 100.0 31 .................................... TCAAAATCGTCCCATAACAAACGATAAGGCA 864357 36 100.0 30 .................................... TTTAAGTTGTTTTTGCTAATTAACATATCT 864291 36 100.0 31 .................................... GGAAAAGTTGTAGGTATTGAATTTACTTTCA 864224 36 100.0 30 .................................... AAAAAAAATGGGGATGATGGAGCATATCCA 864158 36 100.0 31 .................................... TTCCTTTGGAAAAAATAGAGGCAAACGATTA 864091 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 12 36 99.1 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : CAGGAACCTTTGGAACGATAGCAGCATTGATTCCTGCATTTTTTATTTTGCGGTATTTAGGCATAGGAACTTTGATTTTACTAGCAATTTTGCTTTTTTTGGTTTCTATAAAAATCATTGATCAATACGAAAAGCAAACAGGCAAACATGATGATAAACACATTGTTATAGATGAAGTTGTTGGGGTATTTTTAGCCTTAGCAATTTGCGGACAAAGCGTTTTTACTTTTTTGCTTTCTTTTGTTTTATTTAGATTTTTTGATATCACAAAACCATCTATCATCGGTAAAATCGATAAAAAAACCAAAGGTGGTTTAGGTGTAATGCTAGATGATGTTTTAGCAGGAATTTTCGCAGGATTATTTAGTGCAGTAATTTATGGAATTTTACTTAAATTTAATCTTTTATGGTTTGATATAAGCATTATGGAGATATTTTAATTTTATATTTTCACTTTAATTTTTACGACAAAATGCAAAAAAAGGGTAACTCATAGTAAT # Right flank : ACACTTTTACCAAATAAAGAAAATTAGATGTTTTTCTGGGTAAAGATATCTAAAATTATGTTATAATTTCGCCAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTTATCCACGCAGGGTTACAATCCCATTAAAACCATTAAAATTCAAATAAACTAGGTTGTTTAAGTTTGTTTGTTTTATTTTGTTTATTTGTTTTTTCATTACTATATTTAAAATCTTGAGTTTTTTCATCATATTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCACCTAATAAAATTTGCATATTATCAAATTGTTTTTCTGTTATAGTTAAAACCCTTATATTTCCATAAGGTGGTAAAATTTTTTCTACAGATTTTATCGTTGTTTTTGCCGAAGTTAATCCTTTGCAAATTTTTACATATACACTAAATTGCATCATAAAAAATCCAAGTTTTATTAATGAAGTTCTAAATTTGCTCGCATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //