Array 1 4066230-4066727 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP078588.1 Escherichia coli strain Colony149 chromosome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                                                           	Insertion/Deletion
==========	======	======	======	=============================	==========================================================================	==================
   4066230	    29	 100.0	    32	.............................	CGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNT                                          	
   4066291	    29	 100.0	    74	.............................	CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC	
   4066394	    29	 100.0	    32	.............................	CNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAT                                          	
   4066455	    29	 100.0	    32	.............................	TGNNNNNNNNNNNNNNNNNNNNNNNNNNNTAT                                          	
   4066516	    29	  96.6	    32	............................T	GTGTTTGCGGCATTAACGCTCACCAGCATTTC                                          	
   4066577	    29	 100.0	    32	.............................	AATAGCAATAGTCCATAGATTTGCGAAAACAG                                          	
   4066638	    29	 100.0	    32	.............................	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC                                          	
   4066699	    29	  93.1	     0	.A..........................A	|                                                                         	
==========	======	======	======	=============================	==========================================================================	==================
         8	    29	  98.7	    38	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                                                          	       

# Left flank :   AATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGTTCCCCGCGCCAGCGGGGATAAACCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGTTCCCCGCGCCAGCGGGGATAAACCGGNNNNNNNNNNNNNNNNNNNNNGCTGGCGCGA
# Right flank :  ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT

# Questionable array : NO	 Score: 5.77
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.42, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [18.3-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0.27   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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