Array 1 34338-36105 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBXD010000015.1 Salinimonas profundi strain HHU 13199 contig015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 34338 28 100.0 32 ............................ TTCTGCTAATTCCATGCTCAACGACCCTTATA 34398 28 100.0 32 ............................ AAGTAAAAAAGCACATAATAGGTCAGCATCAG 34458 28 100.0 32 ............................ TGAAAGCCTTTACCGGCTCACAACAAAGATAC 34518 28 100.0 32 ............................ TTGTTCGTTAATAAACAAAGGGAGTAAAAAAA 34578 28 100.0 32 ............................ TGCAGGCAATGCAAAACAAAGGGCGCACCTGA 34638 28 100.0 32 ............................ TAAAGATGCCAGCTTTGATGATATTACCCTGG 34698 28 100.0 32 ............................ TGAGAAAATATGCTTCAGATGCAACCCTGACA 34758 28 100.0 32 ............................ TCTCCCGATTAGCGTAAGGGGTTTTTTTAAAT 34818 28 100.0 32 ............................ GTAAAAGTGCGGGTATTTGTGTTATCGCTGAC 34878 28 100.0 32 ............................ AACCTCTTATGCAGATGGCTTGCACATTTCAG 34938 28 100.0 32 ............................ AGAAGAAAAGCCAGCAGCAGATAAGCCGGTTA 34998 28 100.0 32 ............................ TGACCGGCTCACAAAAGCAGCAGGCTGAGGAA 35058 28 100.0 32 ............................ TTACAAGCAATCATGCAACAGGTGGAAATAGC 35118 28 100.0 32 ............................ GATGAGTCTGATAATTCCATTGAAGATAGTTA 35178 28 100.0 32 ............................ TTAACGGCCTTGAGCCAGCTGACATGATTGTT 35238 28 100.0 32 ............................ GACCCGCCCGACACCAGGCGCACGGGTTTACC 35298 28 100.0 32 ............................ AGCACGTAATGGTTTAAAAGGGAGCCATCCGG 35358 28 100.0 32 ............................ ATCATCGTATTTAACGAGAATCTGACGCTCAA 35418 28 100.0 32 ............................ GTGGACGCATCCAGAACCGGCGCACCGTGTCG 35478 28 100.0 32 ............................ TATAAATTTTCGGCTGATGCGTGTAAGCCGTC 35538 28 100.0 32 ............................ TATAAAGATGGCATGAGCGAAGATGAGGTAAA 35598 28 100.0 32 ............................ TCGACGTATCCGTACCCGTTCCAGGCTGAGCG 35658 28 100.0 32 ............................ TGGTTGCACCATTCGCGCCCCACACGTAGCGC 35718 28 100.0 32 ............................ TGCAAGGAAAGTTGCGCGCCCTCTGCGGCTAC 35778 28 100.0 32 ............................ ACTATGGATGGTGATCGCTTTTTCTGTAGCGA 35838 28 100.0 32 ............................ GACGAAATCAAGATCCGGGGCTGGTTTGAAAA 35898 28 100.0 32 ............................ AAATCACCCGGCCCGGCACACCAACGCCCGCC 35958 28 100.0 32 ............................ TTATTCGGGAGACAAACCTGGACGACTACACA 36018 28 100.0 32 ............................ AATCCACAAACCCAGAAAGCAGCCGAACCCGT 36078 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 30 28 100.0 32 CTTAACCGCCGCACAGGCGGCTTAGAAA # Left flank : CTGGAACAATTGGAGCAATTTCCCTGGCGTAAGGGGCTGGGGGATTTTACTAATGTAGTGGGTATTAATAAAACGCCGGATACCAAAGAGTATTGGTTGGTGCAGCGGATGCATGTTCAAAGTAGCCCGGACCGACTTCGCCGCCGGGCGATGAAGCGTCATAGCTTGACCTACGACCAAGCCGTTGAACGGATACCAGACAGCGCTGGAAAGCGGCTTGACCTACCTTTCATCCGAATTAAAAGCCGATCGACAAACGGCCAGCAGTTTCCTTTATTTATTAAGCAGACGCTGTTAGCGGAAGTGAAAACCTCCGCGATATTTTTTTCGAAGTACGGACTAAGCGCCACAACACCTGTACCGAAGTTTTAACCCTTTTTCTAAGTATCAACCACGAAGCCTGTACAACGGGCTTTCTCTTGTTCATTAAAAAAAGGGTCATTTGGCCAGAATCCACTCATGTTCTTTAACAATCAGTAAGATAGTGGTATTTTTTTCTA # Right flank : AGGCGCCAAACGTTACATGATGCGCTTACGATAAGACGCTACAAACGCTAAGGCTGATGCTGAACGAGAGGCTGCCACCGAAAGCCTGGCAATGGCAGAATCTGTACTTCGCCATTTGCGCAGTACGTATTTTGGTATTGAAACTTAATTGTTTAAAAGTCAGTAAGGTTTTGAGGTTTATGCGCTTAACTTTTAAAATCTCACTCAGGAGTGTATACTATAACTATACGCACAAGGATTATGTTTTGATTGTTAGTTTTAAGTCATCTGTTTTACAAGAATTTTTTGAGTCTGGTGACGTTACATTACTTCCCTCAGCTTACGTTTATGAAGTTGCGGAGGTTCTCGAGTATCTGGATGCAGCGATTCAGATCACAGACTTGGAGCTATTAGGTGGTTTTACCATTTATGAGTACCAGCCAGACAACTGGTCAGTAACAGTTACCGTAAACAGCGTTGAGCCAGTTGGTAGTGTAACGTGTATGTTTATGAATAGTAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //