Array 1 72403-71219 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWKL01000013.1 Klebsiella pneumoniae strain VRES1612, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 72402 29 93.1 32 ............TG............... TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA 72341 29 100.0 32 ............................. AGGTATTTGACCTCATCCAGAAAGGCACAGAC 72280 29 100.0 32 ............................. GCACCCTCACGGATACCTTTTGCACAGTGTTA 72219 29 93.1 32 ............TG............... TTACCAATGGGGAAAAATCTTCATTTGTAAAT 72158 29 96.6 25 .....T....................... AACATCAGTGGAAATCCACTGCGGC Deletion [72105] 72104 29 96.6 32 ......T...................... CGAAAACGGCAACCTTCATAAAAACGTCTTTT 72043 29 93.1 32 ............TG............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 71982 29 100.0 32 ............................. TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 71921 29 100.0 32 ............................. CGGTAACGCAAATGTGATCCGATGTCGTCAGG 71860 29 93.1 32 .............T.A............. AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 71799 29 100.0 32 ............................. AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG 71738 29 93.1 32 ............TG............... TTAATGTTTTGTTAATTTATGAGTGTGGTGAT 71677 29 93.1 32 ............AC............... AGCAAATCGAAAATCCGGCTGTTTGAAAAATG C [71672] 71615 29 89.7 32 .............T.A............C CATGAGCCTGCGCACTCTGACGCGCACCTGCT C [71610] 71553 29 100.0 32 ............................. TGAGGCTGCTGACGGAGAATTGGGACCTGTTC CC [71547] 71490 29 96.6 32 ..............C.............. CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 71429 29 93.1 31 .............G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 71369 29 93.1 32 ...C......................T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 71308 29 96.6 32 .............T............... GGCATGAGCGAGAACCACTGCGAGAGTGTGGT C [71297] 71246 28 86.2 0 ..........A.....T......-....A | ========== ====== ====== ====== ============================= ================================ ================== 20 29 95.4 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGATAGCGTTAAAGGAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACAGAACCAAAGCAGACTGGCAAGGTTACAGCGCCAGCTTGCCCGTAAAGTGAAATTCAGTGCGAACTGGAAGAAGCAGAAAGCAAGAAC # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.43, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //