Array 1 340810-341439 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JYGN01000007.1 Streptococcus gordonii strain UB10712 TZ88_contig000007, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    340810	    36	 100.0	    30	....................................	TCACTATTTTTGAAATTACGATTAACAGCT	
    340876	    36	 100.0	    30	....................................	CGACAACAACGAGAAGCCACCCGTTCAACT	
    340942	    36	 100.0	    30	....................................	CGGTCGGACGTTCCAGCTTGTATATATTCA	
    341008	    36	 100.0	    30	....................................	CAGGATTATTAATAAATCACTCTACAAAGT	
    341074	    36	 100.0	    30	....................................	ATGGATCCGTTTCAATCCCATGGACGGAAA	
    341140	    36	 100.0	    30	....................................	ATTAGTTGATTTGTGATTAACTGTTATGAT	
    341206	    36	 100.0	    30	....................................	TATTCCCTTTCTAATGAGCATGCCACTTTC	
    341272	    36	 100.0	    30	....................................	AAACCTGATGGTCGGAACGAAAGATTTTAC	
    341338	    36	 100.0	    30	....................................	TGATTTCCCCTGCAATAAGTGTCTAACCCA	
    341404	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	 100.0	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   ATCAACTCAATGACAAACCAGAAGTCAAGTCTATGATTGAAAAGCTAGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGCTTGGAAAACGAATTGGACTTGGAATACGACGAAATCACCATTCTGGAGTTAATCGATGCACTAGGGGTCAAAGTTGAAACTCTGAGTGATACACCTTTTGAAAAGATGATAGAAATTGTCCAAGTCTTTAAATATCTTTCCAAAAAGAAACTCCTTGTCTTCATCAATGCGACCGCCTATCTATCAAAGGATGAGTTAGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTCTTATTTGTCGAACCTCGAAAAGTCTATGATTTCCCGCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG
# Right flank :  CAATATTAAGATTTAATTCAATTCAACCATACTAGCTAGAGGTTGGTGGGGGGGCAAATAAGAAAGCAAATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGCGTTCCTTGGTCTACAGTAGCGGACCTTAGAAAAGGGAAAAACAGTATCGATAAAATGGCCCTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAGAAGCGGAAAAGGACGATGAGTTTTACAATTAATCTATCCAAAAAAACCACCTAAATAGGTGGTTGTTTTCATTTATCACTGCTTACTAGAAGAAGAACTTGAGCTGCTTGAGCTGTCGCTACTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGATCAATAGTCGATTCGCCCTTGCGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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