Array 1 578061-581746 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLAJ010000002.1 Citrobacter braakii strain FF423 NODE_2_length_841525_cov_47.9341, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 578061 29 89.7 32 CAC.......................... ACGATCCCGATATTTGGTTAGAGGCAATCGGT 578122 29 100.0 32 ............................. CCATTCGACGAAATCAGGAGCATGGCGGATGA 578183 29 100.0 32 ............................. CCGTTCCGGTTATCTTGCCTGTCTGGTCAATA 578244 29 100.0 32 ............................. CAGGCCATAACCGGGCGCTACACGCTCTCATA 578305 29 100.0 32 ............................. CATCACGCCAGGGGCGCACCAGGCAGACGCAT 578366 29 100.0 32 ............................. TTGATAAAACAGTATGGGGTGCTCATCGTCTT 578427 29 100.0 33 ............................. ATTCTGCTGCTACGACGGGTTTTAGTTTTTTGC 578489 29 100.0 32 ............................. CTGAATCGTTCACAAATAGCCGGGATTTTCAA 578550 29 100.0 32 ............................. AATTTTTTTCCGGTACAGAACAAGAAGCAGAA 578611 29 100.0 32 ............................. CTCACCGTTTGCGTGGCACCATTGAACGGGCT 578672 29 100.0 32 ............................. AAACGCAACGCGGCCTAACCTGGTACAACTAT 578733 29 100.0 32 ............................. GTCCAGCAAACGTCACGAGCACCAAAGATACT 578794 29 100.0 32 ............................. GGCAAGCAAAACGGGCTGGTTAGCTGGAACGA 578855 29 100.0 32 ............................. CCCTAAAAATAATGATATAGCAATACCGATTT 578916 29 100.0 32 ............................. GTTGCTGTGATTTCGATTATTGGTTTTTTTGT 578977 29 100.0 28 ............................. AAAACGCTCCAAATAAATAATCATCGAA 579034 29 100.0 32 ............................. GCGACCGCGCCGATTTAGCATAAACTGCATTG 579095 29 100.0 32 ............................. CGAGGTAACGGAGCGAGCAACGAACCTGTACC 579156 29 100.0 32 ............................. CGATTCGGGCGAATAGCTGTAACCTTCCGGCA 579217 29 100.0 32 ............................. GGCGAAACACCGCGTAAATTGGGAGGCTATCA 579278 29 100.0 32 ............................. GATTTATTACATCGCACGTTCCGTTAATAGCG 579339 29 100.0 32 ............................. CGCCGGGATTCATCGTCACGACGCGGATAGCC 579400 29 100.0 32 ............................. ATTATCAGCATGCATTAGAGCGTATTGCGGAT 579461 29 100.0 32 ............................. AACCAGTTTCGATAACAAAGGCGGTGGTGTTA 579522 29 100.0 32 ............................. ATCTCACTTTATTTCTTAAACGCCTTCGTAAA 579583 29 100.0 32 ............................. GACGGTATTATTTTTACTGAGCCTACGCGCAC 579644 29 100.0 32 ............................. GGCGTGGTTTGGCCGTGGTGATACCTGCCAGT 579705 29 100.0 32 ............................. AGATCTCGTTACGGATGACAGGGCTTGTAACC 579766 29 100.0 32 ............................. ATACCTGAAAATAAAATAAAAACATCCTGGTT 579827 29 100.0 32 ............................. CACGCGAGGTGATTGCCCCGGGCGCTCCCCGT 579888 29 100.0 32 ............................. GAAGAGCGGTTCCTCGTGCTGGTGGTGGATGG 579949 29 100.0 32 ............................. GCTGGCCGAACATTCCATTACCACCGGTTCCG 580010 29 100.0 32 ............................. CAAAATATTAAAGTCGATGCCCTTGGTTTTAA 580071 29 100.0 32 ............................. CTGCATGAATAGTATAAACATTATTGTTAACG 580132 29 100.0 32 ............................. GCGCCCGCGCCGATTTAGCATAAACTGCATTG 580193 29 100.0 32 ............................. CCCTGGCGGGCAATCCATGCCTGGTTATGGCC 580254 29 100.0 32 ............................. AAACTCGGCATTACCAAAGGTATCTGGCGTCA 580315 29 96.6 32 .............T............... GGATTTTATTTCTGACGCAGCAAACCACGCCG 580376 29 100.0 32 ............................. CTACCTATTGCGCTATCTGTCAGCGGCTAACC 580437 29 100.0 32 ............................. GTGCTGCAAAAAGAGCTAATTGGGACCAATGA 580498 29 100.0 32 ............................. TAGGCGGCTTGAATCCGTCGCGGTTGCATCCA 580559 29 100.0 32 ............................. GAGACAAACAGTGAGCAAACAAAAACCGACGA 580620 29 100.0 32 ............................. CCGGTGATATCGAAATCAAGCGTGAGCATCGT 580681 29 100.0 32 ............................. GTTTATTGCTTTAACGCTGATGGCGCTGATCA 580742 29 100.0 32 ............................. GGGAAATACGACTGTTTCCGTGGGCAGCCGCT 580803 29 100.0 32 ............................. GAATTTAAAATGACAACCACTATCAATCTCGC 580864 29 100.0 32 ............................. CGCGCGCGCGTTTCCGCTGGCAACACAGAGAG 580925 29 100.0 32 ............................. TCCCCCAATGGCTTCAATTTTACGGTGGTGAT 580986 29 100.0 32 ............................. TTCCACAACAACAACAGCCCGACCTTTCCCCA 581047 29 100.0 32 ............................. TTTATTAACGAGTCTGTCAAACTTGACTCTAA 581108 29 100.0 32 ............................. GCTATGAACAGTGAGCGCCGCCGAGTTGGTGG 581169 29 100.0 32 ............................. TTAATCCCATGGTCATATCACGGTAATTCACA 581230 29 100.0 32 ............................. TTAATCCCATGGTCATATCACGGTAATTCACA 581291 29 96.6 32 ............................A CGAGGCACAAAGCGAGGTAACGGAGCGAGCAC 581352 29 100.0 32 ............................. TCGCTCAGCTAGAGGGGAAGCGTTCAAAGATT 581413 29 100.0 32 ............................. TCGCTCAGCTAGAGGGGAAGCGTTCAAAGATT 581474 29 100.0 32 ............................. TCGCTCAGCTAGAGGGGAAGCGTTCAAAGATT 581535 29 100.0 32 ............................. CAGATTACGGCGGATGAATACGCATACGTGCG 581596 29 96.6 32 .............T............... AAAACGGTCCCATCCGACAAAAATAACCATCA 581657 29 100.0 32 ............................. CATTACCCGGTCATCATTATGGACAGTATCGA 581718 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 61 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GGTTAATCAGTGTATTAGTGCTGCCACATCCTGCCTTTATGGTATTACCGAAGCCGCGGTATTAGCCGCAGGTTACGCACCTGCTTTTGGTTTTGTGCATTCCGGTAAGCCGCTCTCTTTTGTGTATGACATTGCTGATATCGTCAAATTTGATGGTGTTGTTCCGGTTGCTTTCGAGATTGCTGCCCGTGCGCCAGTCAGTCCAGATAAAGAGGTTCGTCTGGCCTGTCGGGATATATTCCGCAGCCAGAAAACGCTGGCGCGGATCATCCCATTGATTGAGGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAGCCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGTCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATATTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTATGTTGGCGATACCT # Right flank : ACTTTGAAAGCAGAAATATTATGGAGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //