Array 1 8015-7185 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVPR01000266.1 Lacticaseibacillus rhamnosus strain 214_LRHA 1921_8014_103914_531+,...,824_, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8014 36 100.0 30 .................................... TGAACACGATGACGTAAAAGAAATGTATGT 7948 36 100.0 30 .................................... GAATGTTTTACCATCGGAACGCGTGGTAAT 7882 36 100.0 30 .................................... AATAGCCAAGTAAATACCGGCACGATTTAC 7816 36 100.0 30 .................................... CAACATCAACAACAGCCGGCAATTGCTGCC 7750 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 7684 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 7618 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 7552 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 7486 36 100.0 30 .................................... CAATATTTTGCCCCTTGTTCCGTTGCGCCA 7420 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 7354 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 7288 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 7222 36 86.1 0 .......................AA.C....G...G | T,C [7188,7194] ========== ====== ====== ====== ==================================== ============================== ================== 13 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : | # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 18631-19658 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVPR01000268.1 Lacticaseibacillus rhamnosus strain 214_LRHA 1923_19654_225507_732_,...,1468+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 18631 36 100.0 30 .................................... TAATGTGCCGGTGGGAGCAATGGTGTTATC 18697 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 18763 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 18829 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 18895 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 18961 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 19027 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 19093 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 19159 36 100.0 30 .................................... CGGCACGCTATTCCATCCGATTAGCTACTT 19225 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 19291 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 19357 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 19423 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 19491 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 19557 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 19623 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 16 36 100.0 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : AGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGCGACTAACACCTGCGATCAAAGCGAAACGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGCCAGTTGCTGGAGGAGATCACAACGACTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGAAGACAAGGTTGCGCCCTGTACACTGTTAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGCATTCAGCGTTGGGACAATCCTTCCAGAAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA # Right flank : TAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //