Array 1 62955-63644 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEEH01000006.1 Enterobacter roggenkampii strain ECC4241 ECC4241_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 62955 28 100.0 32 ............................ TTGCGAAACCGGTGACCGCGGCGAACTGACCC 63015 28 100.0 32 ............................ GGACATGGCAGGACGTCAGGGTAATCAGTCAC 63075 28 100.0 32 ............................ ATGAGCGTGGCTAGTTCTTTTGTCATTGCAAA 63135 28 100.0 32 ............................ ATTGTCGCAGGCTTTTCTTTTGAGTCGGCTGC 63195 28 100.0 32 ............................ CAGGTGATAATGTGGACGGGCTAATTTCGAGC 63255 28 100.0 33 ............................ TTGGTCAAATAAGCGCAAGGTTAAACCCTTATT 63316 28 100.0 32 ............................ TCTGCCGCGTCTGTTTTCCTCGCCTCACGCGG 63376 28 100.0 32 ............................ CAGTGAAGCATTCATAGCCCGAGAGGTTTTAC 63436 28 100.0 32 ............................ TGATGAAGGCAGGCGAGAAAACAGAAGAGTAT 63496 28 100.0 32 ............................ TCCTTCGCCATTGCAGTAAAGGACTGTGTGAG 63556 28 100.0 33 ............................ AAGCGGGGTAGCAGAATATCGAGCCAGCGCAGT 63617 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCACAAACGCAGCCCGTATGTCGTTGCCTTGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACTGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACCTTTTGATTTATATAATGCTAATTTACGAACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTTTAACAATAAGATGGCGCAGTTTCCTTTCA # Right flank : AAAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTTCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCTAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCGCGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACTTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGCGACACAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 73141-74911 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEEH01000006.1 Enterobacter roggenkampii strain ECC4241 ECC4241_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 73141 28 100.0 32 ............................ AACCCTCTGTTATGGGATGAGGCCAAGGCGAT 73201 28 100.0 32 ............................ TGATGGCCGGACTACTCATGCCCGGCGCTCAG 73261 28 100.0 32 ............................ ACCGCGATGTACAGCAATGACCCAGGCCACGA 73321 28 100.0 32 ............................ AGCCTGAAAGTTTCGGAATGCCTGTGGGTCTG 73381 28 100.0 32 ............................ ATCGATTGAGTAATATTCATTTTCATCAGTCA 73441 28 100.0 32 ............................ TTACCTGAAACTCTACCGGGCGAATTATCCTG 73501 28 100.0 33 ............................ TCCCGAGGCTGTCGTGGTCTGGCAGGACCATGA 73562 28 100.0 32 ............................ TATACCGAAATGAAGCTGCAGATGGCGGCAGC 73622 28 100.0 32 ............................ TGAAGATATTCAGTAAGGGAGATCTCGCCCTC 73682 28 100.0 32 ............................ TCAGCGCTACAACAAGATCCGCGCGGAATTCA 73742 28 100.0 32 ............................ GGTCAGCAGCTCTTTGCGGTAATTCAGGATAT 73802 28 100.0 32 ............................ GGTTCGGTGCAGTGGTCATTAACTGCGGTTGT 73862 28 100.0 32 ............................ TTCGAGGTCAGCGAAGTCTGGCAGGATGAAGT 73922 28 100.0 32 ............................ AACACGGTATAAGTAGTTTCCAGGGTCATGCC 73982 28 100.0 32 ............................ AAAAAATTCAAGAAAGGGAAGGGGAAGACACC 74042 28 100.0 32 ............................ ATATTTCCATCCGCCGTTAGGCGCAAATATTT 74102 28 100.0 32 ............................ GTCCTGGGGCGAGCAAACAACGGTGAACGACG 74162 28 100.0 32 ............................ GAACTGGCGAATGCCGGAATGGATGCGCATCT 74222 28 100.0 33 ............................ GAAGACTCCAGCAATACATTCTTGATAAATCAT 74283 28 96.4 32 ................A........... TGGTGATGCTCTGCAATCAGCGGGACAACGGT 74343 28 100.0 32 ............................ CAAACTCCGCAATTTGTTTTTCTGTCAATGGG 74403 28 100.0 33 ............................ ATAACATTAAGAGATGTTCCGGCAGCAGTACCG 74464 28 100.0 32 ............................ CACTCGGTCTGGCCGCAACTGCCACGCCTGAC 74524 28 100.0 32 ............................ AGTACGTCCTCGACGAACAGCTTGCTGCGAAA 74584 28 100.0 32 ............................ GCACAACACGGAAACAAACCACCTTAACGCTG 74644 28 100.0 32 ............................ TACTCCGTACCTGGTTACATTGACCACTTCTA 74704 28 96.4 32 ..T......................... GTACTCGATACCCTCAAAACCGAATTTAAGCT 74764 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 74824 28 85.7 31 A..........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [74848] 74884 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 30 28 98.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGTGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGGCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGCCGTCCACTCGTGGATGTTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCATGGTGGATGGAATCGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTTAGAGAGGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGGGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //