Array 1 40900-41353 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWQ01000014.1 Streptomyces sp. LaPpAH-95 B087DRAFT_scaffold_13.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 40900 29 100.0 32 ............................. CACGGCCACGCCGCGAGTACGTACGAGGTCTT 40961 29 100.0 32 ............................. ACGTACAAAGAAGGCCATTACGGCCTTATGCA 41022 29 100.0 32 ............................. GTCTCGATGACGCCGCGCTGGAGCTGGGTGGT 41083 29 100.0 32 ............................. AAGAACCCGTCGAGCTTCGCCCAGTCGATCGG 41144 29 100.0 32 ............................. TCGGGGAGCTTGGGGGCGCCGAACGCGCCGGC 41205 29 86.2 31 ...C.............A....C..C... CGAATGGGCGACGACGCGTTCCTCGTCCGAG 41265 29 89.7 32 ..C.....T........A........... TTGAGCTACAACCCGCCGTACCAGGCCGGTAC 41326 28 93.1 0 ...C.....................-... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.1 32 GTGTTCCCCGCACGCGCGGGGATGGTCCC # Left flank : CTCGTAGAGGCTTACGGCCCCGCGCCCACCCCAGGCGACGAAGGCGTCGGGCTCGTGATCGTTGCCGGGGTGCGGGAAGGAGACCTTGAGCACGGCGGGGGGCGTGTGGTCGCGGCGCACGGGGAGGATGAGGCCGACGCCGCCGTGGGTGAGGGGGCCGTCGGGTGTGCAGGCCCACTCGTCGACCAAGGCGCCGACGAGCGCGGGGAGTTCGCTGAGCCAGGCTGCTCCGGCGTCGCCTTCGCGCTCGACGGTGGTCCGCGCGAACTCCTCGGGAATCACGATCATCCGGGCACTGTACGTGGGGCGGGGCGGGGGTGGGCTGGGGTTTACGGGGCGGCGGGTGGCTGTTGCTGCTGAACGGGGGGGGGTGTGGGTGGGGGTGTTGGCCTAGGGTGGGGGTGGGTGGGTGTTGTGGGGGCGTTGAGGGGGATGTGCCGGAGTGTGCGGAAGTGGTCAGAAGCAGCCCTGACCCGTGGCCAAGCCGCAGGTCAGGAAGA # Right flank : CGCCGTTCGCCAGCCTGCTGCGCCTGACGCTTGGCCCCGCTCTCCGCGCGGCCCCAAGGCCGCCCACGTACCCTGGCCGCCATGTCCGCCCACCCCGAACCCCTCAGCCTCCGCCCCCTCGCCTTCACACGCGACGAGATCCGCGAAGTCGTCGCCCTCTACGCCGGCAACCCCGCCTACTGGCGCGCGGCAGGTGAGTACGACCCCGGGGACATTCAGGCGGAGGCGGTTGAGGCCGATCTCAGGGCGGAAGTCGCTGTGGAGGGCGGCGAGGTGTTGGTTGGCCGGGATGGGGAAGGACGGCTCGTCGGGGTCGTTTGTCTGCTCGGCCGGCATCCGAAGGACGGGCTGCCCTGGATCGGGCTGCTCATCGTGGACGGTCACTCCCGCCGTACGGGAATCGGGCGGCGGCTCGCCGGGCTGGTCGAGGAGCGGTTCCGGGGCGAGGGGCGGAGCGGCATCCGGCTCGCCGTGCTGGAGAACAACCCCGACGCCCTCGC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 45146-45477 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWQ01000014.1 Streptomyces sp. LaPpAH-95 B087DRAFT_scaffold_13.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 45146 30 100.0 31 .............................. GAACGGGCCGCGAAGTCACGCTCCTCGGGTC 45207 30 93.3 31 ............................TC ATGTCCGCGATCAAGGTCCGGAAGTTCACCA 45268 30 100.0 32 .............................. TGACGACCACAGCCCAGCCCACGAGCGGGAGG 45330 30 96.7 27 .............................C CATGTCGACCGTGCCGACGAGGCGTAC 45387 30 100.0 31 .............................. TCAGCTCCCAGAACCGGGACAGCCGCCGAGG 45448 30 86.7 0 .............AC..........C...A | ========== ====== ====== ====== ============================== ================================ ================== 6 30 96.1 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : ACGCGGCGCGGGCCCTGTCGGCAGCCGACCGCTTCAGCCCGCTGCCGTTCGCGTTGGGCCTCCGCGTCCCCGCGTGCACGTACATCGCCGCCGAGAAGGTGCGGGGCGCCCAACCTCACTGGTTCTACAGCCGAAACGACCGGTCCTGGGCGTGCGTCCTGGTGGAGGACGGGGAGCCGACGGCTCGCGTGTGGCAGCGGGGTGAGCGGCGGTTGTGGGATGAGGTGGAGGGTGCGTATGCGTGGTGGGTGGGGAGGGGCAGGCCGGGGTGGGAGCGGTTCGGGGTGACGGTGAGGAGGGTGGGGGAGCGGGTTTGGGTGGGTGAGGTGGGGGAGCGGGTGTGAGGGGGCGGGCTGACGGGAACGGGCCTGCTTGAGCTGGTGGTTGGCCTACACTGCGGGGTGTATGCCAGCTGTGGGGCTGTTGGGGTGGTTATGCCGGAGTCCGCGAAAGTGGTCGGAAACGCCACGCACTCGAGGTAAACCCGCAGGTCACGCGGT # Right flank : ACCTCCAACTCCGCTCTTCGCTGAGGGCCCCACCGCGCCCGGACGAGGTGGGGCCTTCCGCCGGACAGCGCGTTGCTCAGGACCGCTGGCCACCCGCATGCTTGACGACCTTGTCCGTCACGTCGACCGTGTCCCCGGCGGGAGGCGCGTCGACATCGACGTCGGTTCCGAAGTCGCTGAAGTCCATGACGACCTTCGCCTTGCCCCGGTTCGCCGAACCGGAGTCCTTCGCGCCCCCGGCCGGCTGCGCGGCGATTTCGATCTGCTGGCGGCGCATCAGTCCCTTGCCATCGACCCACAGGTCCACCGGCACCGTCTCGCCGAGCTGTTCGCGCAGCTTCCGGGCCTGCGCGGCGTCGCCCTTGGCGAGCTTGTCGATGTCCAGGTCGACCTTGTAGTGGGTCGTCGCGACACCGCCCAGGTTCTCCGTACCGACCTTCTTCACGTCCTTCTCGGACAGCGACTTGGAGTAGGCGAAGGAATCGGTCGGATCGCTCACC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 46746-47566 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWQ01000014.1 Streptomyces sp. LaPpAH-95 B087DRAFT_scaffold_13.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 46746 29 100.0 32 ............................. GTCAAGGCCGTGCGCGTCGAGCCCGCCTACCT 46807 29 100.0 32 ............................. CGGATCGCGGCGGAGGAGAAGGTGCGCGCCCA 46868 29 100.0 32 ............................. GTCGACGGTGAGGTGGGCGGGTGCGCCCGGTG 46929 29 100.0 32 ............................. CAGATCCGTCCGCAGCGGGCGACGCCCAGCGT 46990 29 100.0 32 ............................. GAGTCGGGCAACTGACGGCGCGCAGCTTCCAG 47051 29 100.0 32 ............................. GTCTGCCGGTCGGACGCCTTGGCGACGAGACC 47112 29 100.0 32 ............................. AACAGGGGCGGGGTGGGTAAGAGCGATCTGAC 47173 29 100.0 32 ............................. AGCACTACCTCGTCCAGCCCCGAGCTGTAGCC 47234 29 96.6 32 ..........T.................. GCACCACTCCGCATCGAACCCGAGGTGGGCAA 47295 29 93.1 32 ..........T..............C... GCGGCGAAGGGCCTGGTCAAGGCGCTGGAGGG 47356 29 82.8 32 G.........T.......A.A....C... TTGTCGTACTGGCCGTCACGGAGGATCGCGTG 47417 29 82.8 32 .C..........T....C....A..C... GCCACGCTGCGCCGTCACGGCATCACGCCCGT 47478 28 82.8 33 .C.T........T.......A....-... GATGGCCGACACCGTCGTGATCTACAGCCAGAA 47539 28 82.8 0 ...T..........T........-CC... | ========== ====== ====== ====== ============================= ================================= ================== 14 29 94.3 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : GGTGGTCTTCTTGTTGGTCGCCTGTACGACCTGCGAGGGCGACGAGTCGGCCCTCTTGCCCGCCCCGGAGGGCTTCGCGTCCTTCGCGGCATCGCCCTTGTCGTCCGACCCGCATCCGGCAAGCGCGGCAACGGCCAGGAGGCCCGCCACTCCGTACGCAGCCACCTTGGTCCCCCGGGTCTTCACGTTCGCCATCACTGCAGCCTCCCCAAACCGAAACCGTTACGTCAGGTATGCGCCCGGTGCCCGGAAGGTGATCCCGCATGCGAAGCAGCTGCCGTTCTACGCCAGCCGCAGTAGTTCGCGTCCAGCCGGGCTTTCCGATGCGCGCAGGCGTGGGGAGGCTGGGGGCGCACTGGGCGAACGGGCAGGCTATCCAGAGGCGTTGGCGTACCCTTGCCGCGCATGCCTGACGTGTGATTGTTGAGATGGATATGCCGGACTGTGTAAAAGTGGTCAGAAACCGCGCCTTGACTCGATAGACCCGCAGGTCAGCGAGT # Right flank : CATGCAGCGCGGAGCCCTTACGCCCTGTGGCCGTACATGCGCCCCCGCAGCCCCGCTACAGCGCCCAAGAAGGCCCATCCGCCTCCCCGTACCAGACCCGCTGCCCCGCCGACGTCACCGTAAGACCGAAGTCCTCCCGGGCGGGGACCCCGTCTGGGAATACCGTGGCCAGCTCCTCCACCGCGTCCCACAGGCGCCGCGGTCCGATCTGCCGCACCCTCCCCGACGCATGCAGCGTGGCCGTGGAGCCGTCCTCCGTCCAGAGGCCGACCCCGGTGACCTCACCCTCGTCGTTGCGCCAGGAGCACGAGCGGTATCCCGGAAGTGCCAGGGACAGTGGGAACTTCAGCCGGTCCAGTACGTCCGTCACGGGCACCGACGTGACCGTCCCTGCCTCCGTCTCCAGCCCGGCGAAGTCCGGGGACTTTGCGGGCTGGCGGCGCGGCATGAAGTACGCGGGTTCGGGAAGGAACCGCCCGGTCGCCTCCCCGGCCTCCGCG # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 49073-49284 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWQ01000014.1 Streptomyces sp. LaPpAH-95 B087DRAFT_scaffold_13.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49073 29 100.0 32 ............................. CTGCCGCCCTCCGTCAAGCCGAAAGAAGAAGG 49134 29 100.0 32 ............................. CCCGGCGCCGAGGAGATCAAGCGCCCGGAGAT 49195 29 100.0 32 ............................. GGGTTTTCGCAGCGTCACGCCGAGGGCCTGAC 49256 29 79.3 0 ......................CACCAT. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : GGTACGAAGTGCTCCCGCGGTACGTCGGCGAATGCCGCCAACCACCGGCTCTGACGGCCCCCTTCGCCGAGGGCCGCGGCGAACCGGGCGCGCAGGGCGGCCGTGGCGATGCCGTTCGGGTCGGTCATGTGGTGACCCCTTGCGGGTAGTTGGTGGGTGGGGCGGTGACGGTGGGCATCTGGGTGCGATTCTGCGTCCGGGGGTGGTGTGGTGGCGGGGTTGTTCTCGAAAGAGCACCCGTGTGCGTGAAGGTCCCACGGCGGAGCTGAGATTTGAGCGATAGGCGTAGCCGTGTACGAGTGCTGCGGCAGATCGTCGTGGCGCCGGGCGGGCTGTCCGGCGGGTAGGCAGGGTGGAGGACGGTGCGGTGGCGCGAGAGTGAACGGTTGGGCGGGCAGGTCGCCGAGTGGGCAGGTCGCGGAGATTCGGTCGATATGTCGGAATCAGTGAAAGTGGTCAAGAACAACGATGGCGCGGGATAAAGTCCCAGGTCACGGAGT # Right flank : CACCCACGCAGCGCCCGCCCAAGCCCCCACCCGGCTACGCTCCCCGGCATGACCGACCCTCAAGCCCGGGCCGACTTAGCCCCCGACCTCATCCGAGCCCTCCTCCGCGACCAGCACCCCGATCTCGCCGAGCTCCCTCTCAGCCTTGCCGCGCGGGGGTGGGACAATCAGTTGTGGCGGTTGGGGGACGGGCTTGCCGTGCGGTTGCCGTGGGCGACCTCGTCTGCTGATGAGTTGTTGTTGAAGGAGCATGCCTGGGTGCCCGGGCTGGCCCCCGGGTTGCCGTTGCCCGTGCCTGTGCCTCAGCGGCTGGGCGTGCCGTCCGAGCGGTTTCCGCGGCCCTGGTTGGTCACCACTTGGGTGCCGGGGGAGCCGGGCGATCGGGTTCCGGCTACGCGGGGCGAGGAAGCGGCCGATGGTTTGGCCCGGTTTCTCAGTGCTTTGCATCGGGTGGCTCCGGGTGGGGCGCCCGCCGGGCGGGGGCGGGGCGGGCCGTTGGG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //