Array 1 110018-113889 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZBY01000005.1 Acinetobacter baumannii strain 4390 4390_172, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 110018 30 96.7 30 .............................G TTGGGGGTGGTGGTACTGCTGTCAATTTAG 110078 30 93.3 30 ............................AA ATCCGTCTGAAACGATTGCTGACAAGTTAA 110138 30 93.3 30 ............................GC CACCGCCGATTCAGTCGGGCTGCTCTAACA 110198 30 100.0 30 .............................. TGGCTGCAAGCGGAACCATAATCCATGCAG 110258 30 96.7 30 ............................A. TGAGATAACGGAACCGTCATAGACCCATAA 110318 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 110378 30 93.3 30 ............................AC AGTGATACACGCATGCACAATACATGCATG 110438 30 96.7 30 ............................C. CAACTTGAAGAGCAAATTAAGCTTGCTAAG 110498 30 93.3 30 ............................AG TGAATCATTATCAATAATTCCCCTATTTGA 110558 30 96.7 30 .............................C GTATTTGTAAGACATATCTAACCAAGAATG 110618 30 93.3 30 ............................AA TCACTATTGCGAACCCGACTAAGGTGGACA 110678 30 96.7 30 .............................G CAAGAATTGAAACAATTCAAAAGGTTGCAC 110738 30 93.3 30 ............................GG TGCGCTTGATACAGCTTATACTGAAATTCA 110798 30 93.3 30 ............................AG CAAAGACAGGTTTAGAAGTCACCTGATATT 110858 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 110918 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 110978 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 111038 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 111098 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 111158 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 111218 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 111278 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 111338 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 111398 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 111458 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 111518 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 111578 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 111638 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 111698 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 111758 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 111819 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 111879 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 111939 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 111999 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 112060 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 112120 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 112180 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 112240 30 93.3 30 ............................AG AAGAAGGCGTAAGAGTTCTATTTTTAGACA 112300 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 112360 30 93.3 30 ............................CA ATCCATAAAACCCCAAACGATTATTAATAA 112420 30 93.3 30 ............................CA CTGTATCTAACCCGTCGTGTTGATAAGAAA 112480 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 112540 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 112600 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 112660 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 112720 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 112780 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 112840 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 112900 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 112960 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 113020 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 113080 30 93.3 30 ............................AA GAGAACGAACGAAAGTTCATGGACATGTTG 113140 30 96.7 30 .............................A AATGTGATTATTCAAGATAAGCTAGGCAGT 113200 30 90.0 30 .........A..................GA CCAATGGAGCACGATAACCCCATGGTTTAT 113260 30 96.7 30 .............................A AGTTAATTAAGGGTGTGGCTATGGTTGCAG 113320 30 93.3 29 ............................AA AATCACAAATACATAAATCATTTTTTATC 113379 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 113439 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 113499 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 113559 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 113620 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 113680 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 113740 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 113800 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 113860 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 65 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //