Array 1 116940-115752 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVCN01000006.1 Cronobacter sakazakii strain MOD1_LR636 LR636_contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 116939 29 100.0 32 ............................. GTAACAGACTTACCGGCTGGGAACAGCGACAG 116878 29 100.0 32 ............................. GCCAGTGTCGGAAATAACAACGATCTTGTCGT 116817 29 100.0 32 ............................. TTCTTTTCTCCTGCCGCTGTTGACCTGGTTCA 116756 29 100.0 32 ............................. AGGCTTGTAACCAAGCCTCTTTTTATTTGATT 116695 29 100.0 32 ............................. ACACGCTGATTAACGCCTGGCCTTTGTGGGAA 116634 29 100.0 32 ............................. ATGATGGATCGTTTAGTTATCGTGGTAACATC 116573 29 100.0 32 ............................. ATTATTTTTATGCCAGCAATACGGACTATGCG 116512 29 100.0 32 ............................. GCGACCCGACTGCGCTACTGGACGCGGCTTTT 116451 29 100.0 32 ............................. TCTCTTACATTTGACGTACTGGACGCTACCGA 116390 29 100.0 32 ............................. ACGTTGTCATGAACGGCGGGTTGTATCCGGCT 116329 29 100.0 32 ............................. CTCACACTGGTTGCATTCAACGCAACATAGGA 116268 29 100.0 32 ............................. TACAAGTGGCCGCTTCCACAAATTCGCGAACT 116207 29 100.0 32 ............................. CCAGTTTTCCCGTCGTGGTATTTGACCCGCCC 116146 29 100.0 32 ............................. ATGAACCCACCGGAAGTAGGAAAACTTTCGCT 116085 29 96.6 32 ............T................ TTCTTCGACAAAGGCGGCAAGAAGAAGATCGC 116024 29 93.1 32 A...........T................ TCTGCGAAAATTGCCCCATTCTTCGAAAAAAA 115963 29 96.6 32 ............T................ TGGTCGAAACCACGACTAACGGCGGTAAGACG 115902 29 100.0 32 ............................. GGACGCCTCAACGCTAAGTGCAGCTCTACCCC 115841 29 96.6 32 ............................C AGATCCTGAAGCGCTGTCTGCTGGGCATAAAC 115780 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.1 32 GTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : ACCGTGCTCGCCGCCGGTGAAATCGAACCGCCGCAGCCCGCAACCGACATGCTGCCGCCCGCGATACCGCAAGCCGATTCGCTGGCGGAAGCCGGTTTCAGGAGCCGCTGATGAGTATGCTGGTCGTCGTGACGGAAAGCGTCCCACCCCGGCTTCGCGGACGGCTCGCCATCTGGCTGCTGGAGCTGCGCGCCGGGGTTTACGTGGGCGACGTATCGCGTCGGGTGCGGGAGATGATCTGGCATCAGATAAATGAGTTAGCGGAGGAGGGCAATGTGGTGATGGCCTGGGCCACGAATAATGAATCCGGTTTCGATTTCCAGACGTACGGCGTTAACCGTCGTATTCCGGTGGATTTGGACGGCCTGCGGCTTGTCTCGTTTTTACCGCTTGAAAATCAGTAGGTTATTCGCTCTTTAACAATGCGAGATTGTGAACCAAACGTTGGTGGGATGTTGTTGCACGAAAAAGTGTAATAGATACAAGTATATAGTTTTAGC # Right flank : TTATTGAGTAGAATCGTCTGCCTTGGTGGGTGCGCTTCGCTTACCCACCCTACATATAAACTGGCGGGCCTGCCCTTAACCGATCCACAAAAACTTCCCGTGCCAGCTCTCGATTGCGCAATAAACCGGCATACGGCGCGCGTCGGGTTGCAATCGCCAGGGGCAACAGACATAATGCGCCCTGCGCGTTTAACGACGCTCTCAATGGGGGCCCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGTGTGTGCCGGGATGTAGCTGGCAGGGCCCCCACCCATTTCTGCCCTAAGTCCTTTTTTCAGCTTTATCCTGGTGATGAAACATCATAAGAGGTGTATCAACTCATCCTGGATACGAGCGGCCTTTGGCTGCTAATATCAGGTGCGGTTATTTACTATAACGTTTATGTTTTCATTTATGAGCACTCAGAATGGATAATTCACTCAGGCGATTACC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 143651-142953 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVCN01000006.1 Cronobacter sakazakii strain MOD1_LR636 LR636_contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 143650 29 100.0 32 ............................. ATAACGAGAAAAAAACGGGTGAATCCTGAATG 143589 29 100.0 32 ............................. CTTTCATTAAGAAGGTATTTATTAATATGATC 143528 29 100.0 32 ............................. CTTCACCGTCGCGGGCATTAAACGGGCGGTTT 143467 29 100.0 32 ............................. CCATCATAATCATCCTTGCTTACTTTTGGCTC 143406 29 100.0 32 ............................. GAAGAATCGGAACTGGCAGCATCTTCAACAAC 143345 29 100.0 32 ............................. CGAGAATTTTTCCGCTGACTACATCCCTTGCG 143284 29 100.0 32 ............................. CGATTTAACCGCCAAGTCTCCCGGCTCCGGCT 143223 29 100.0 32 ............................. CATGCACCGGTAAACAGGTACCAACTTACTTC 143162 29 100.0 32 ............................. ATTTGTTGAAAGAATTATGCGAAGCAATCCGA 143101 28 96.6 32 ...........-................. CGGGAGTGATAACAGGTGAGGGCGAGGCGATA 143041 29 96.6 32 T............................ AACGCTGACCTGGCGAACACGCTGCAAAATCT 142980 28 75.9 0 .C.......-...C.T.C.TA........ | ========== ====== ====== ====== ============================= ================================ ================== 12 29 97.4 32 CTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : ATGAAAGCTTTAAATGGATGATGGCAAACAACATCGCGTTTATCGTCGCCAACATCAATATCAACTACCGTCGGCCCGCCGTGCTTGGCGATCTGTTGACTGTAACGAGCCAGGTGAAGCAGCTTAACGGTAAAAGCGGGGTCTTAAGCCAGGTCATTACGCTGGAGCCGGAAGGCGAAGTGGTCGCCGATGCGCTGATCACCTTTGTCTGTATCGATCTGAAAACGCAGAAAGCCTTACCGATTGAGGGCGAGCTGCGTGAAAAACTGGAAAAAATCACAGGGTAAATTCTGCAAAAGTGGCGCGTGTGCTGGCAATCATGGATTTATCACCGCACAGGGTGAACAATCCGGTAGATGTTAACAGCCCACAAGCGTCGCGAAAAAACGCCTTCAAAATCAACAGGGCAGCCGTTCTTTAACAAGATGGGTTGTTGTAAAAATGTTGGTAGGATGTGGAAGGCGAAAAAATGCCATTTAGTACAAAGGGTTACTTTTAGT # Right flank : CCCAGGCTCTTCGCGCCTGTCACTCGCCGCCCTCATTCCCGCCACAATCTTCAGCAACGTTTATACTTCAAAGCCCTTGTTAAATTTTGAACACTGCGCAACGAAGGAGAGGCTATGCGAGTACACCATCTCAACTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTACGATGGCTTCAGTAAAGGGCTGCATGCGCACCTCATCTGCCACTGCCTGCTGATTGAAACCGACCATCACGGGCTGGTGCTGGTGGATACCGGCTTTGGCTGTGACGATATGCGCCATCCGCGCCGCCGTTTACCACTTTTTTTCCGGGCGCTGAATAATATCCAGTACCGGGAATCATTAACGGCGCTGCACCATATTAAAGCGCTCGGCTTTAAGCCGGAGGATGTCCGACACATTGTGCTGACGCATCTGGATTTCGATCACGCCGGCGGGCTGAGCGATTTCCCGCAGGCGCAGGTGCATCTGATGCAGCGTGAAATGACGGCTGC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 79016-76347 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVCN01000007.1 Cronobacter sakazakii strain MOD1_LR636 LR636_contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 79015 28 100.0 32 ............................ AAAATGACGCTGGCGGCGCTCGACGCCACATT 78955 28 100.0 32 ............................ GCACCCGGCCCGCGACTTGTTGCGAACGTCTT 78895 28 100.0 32 ............................ AACGAGTGACGACGCCTGCGACGCAGGCAGCA 78835 28 100.0 32 ............................ GCGCAGCCGACCGGCCCGCACCACGACCCGGC 78775 28 100.0 32 ............................ CCAAGGTACGCTAATTGGCTCTTGCGCTGCCG 78715 28 100.0 32 ............................ CGGGCGCGCGGTGCTTTGATGTGCTTGGATCT 78655 28 100.0 32 ............................ TCTGCTTTCAGGGTGTGGGAAATATCGCCGCT 78595 28 100.0 32 ............................ CTGAATCGCGATGGTGTCCAGACAGGCACTTT 78535 28 100.0 32 ............................ AGGCGCGAGCGCGCCAGAACGTGCTGGAAACT 78475 28 100.0 33 ............................ GCCAGGATATCGGGCTAACCGTCGCTATCAAAT 78414 28 100.0 32 ............................ GTACTGAACGAAACAGGCGACGCACCCCAACC 78354 28 100.0 32 ............................ TATCTGCGCCGCATGAAACCCACTGACAAAGC 78294 28 100.0 32 ............................ AGCACCTGCCCGAGTGGTGCGTTTACGTTGAA 78234 28 100.0 32 ............................ ACTATACAGCCAGTGGTACGACTGGCAGCGGT 78174 28 100.0 32 ............................ TGCTGGTGTACCAGATGTGGCGCAGGCGCTAC 78114 28 100.0 32 ............................ ATCCCGAAAACATCCCAAAAGTTGCCGCTGTT 78054 28 100.0 33 ............................ CTGGGTGTGGGTAATCGAATTCCGTCGCGTTGG 77993 28 100.0 32 ............................ TGTGCGAGTGGGATAAGGATGACGAGTCTTTC 77933 28 100.0 32 ............................ CCACACGCACAGCAGATATTTCACCCACGCGC 77873 28 100.0 32 ............................ CGGGAAAAATTTTTCAGAGAGTTCGTCGAGGT 77813 28 100.0 32 ............................ TTGACGCGCTCGCGACCTATTCCAGCGCGCTA 77753 28 100.0 32 ............................ ATGGCGAAATTTACAGACGCACACGACCTGTT 77693 28 100.0 32 ............................ TGGCCGCGCACCCGCCCTTCGTCGTCGAGTAT 77633 28 100.0 32 ............................ AAATACCGGCTTAACGCTGTGTGGGATATCTT 77573 28 100.0 32 ............................ TCGGCGGGTTTTTTATCGTCTTTAGTCAAACA 77513 28 100.0 32 ............................ ATTTGGCCCCATCCTTTGCGAATCTGCTCATC 77453 28 100.0 32 ............................ TCGGGTTTGGCTCCAGCCTGGTTAACAAAGGA 77393 28 100.0 32 ............................ ATCACCCCGACATCGCGTGATCGCGATCACAC 77333 28 100.0 32 ............................ GATCAGCGTGAACTATCGCGGCTCGGCGGCAG 77273 28 100.0 32 ............................ GATTCGCGTAGCGCGTCGATACGCGCGCAGTG 77213 28 100.0 32 ............................ ACACTCCACGGCCCCAAGTGTAGCGAAACAGA 77153 28 100.0 32 ............................ AGAAGGCACGCTGTGAGAAAAATTCCGGCGCA 77093 28 100.0 32 ............................ ATGTGTTGATGACCTGCATGGTGTTGGAATGG 77033 28 100.0 32 ............................ CACCCGGCGAACGGCAGGAAACACCAGGCGGG 76973 28 100.0 32 ............................ AGAGGTTAGCCGCCTCTAACGTTTTGTTTATC 76913 28 100.0 32 ............................ GCTATACGCGTGCCGCCACTCCGTCTCACTCC 76853 28 100.0 32 ............................ AGATACGCCGGGCGCAGACCCTCTGTGCCCGT 76793 28 96.4 32 ..A......................... GTGGGATAACGTAACCGACGGCGTGAAAATTC 76733 28 100.0 32 ............................ TGCGCGTATACGGGCGAACGGCCGGCGCCACG 76673 28 100.0 32 ............................ AGCGCGCCGAGCGCCGAAAATATGCAGGCGAA 76613 28 100.0 32 ............................ GGTGAAATCGCTGGCATCCGCATCGAGTGAGC 76553 28 100.0 32 ............................ GCCAGATGACGGCGTCCAGGTGAACAAATCCT 76493 28 100.0 32 ............................ CGTGGGTGTGGGTAATCGAATTCCGTCGCATG 76433 28 100.0 32 ............................ ATCCACGCGGACTGAGAGCCGACTGCATTGCT 76373 27 89.3 0 .....................CG-.... | ========== ====== ====== ====== ============================ ================================= ================== 45 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGCACTGGCAGAATTAGAGGCCACGCGCTGGCGGGCGGGTTTGCAGGATTACTGCCAGAGCAGCGCGATATTACCCCTGCCACAGGTTCAGGGCTGGCGCACCGTGACGCGCGTACAGGTGAAAAGTAACCCCGAACGCCTGCTGCGCCGCTCGGTGCGTAAAGGGTGGCTGACTGAAGAAGAGGCGCAGCAGCGGCTTTCTGGTTTACAGGTGCAACAAACCGCGCTGCCCTGGATTCAGGTTAAAAGCCTCTCCAGCGGCCAGCAATACCGGCTGTTTATCCAGCACGGCGCACTTCAGCCCACGCCGGTCAGCGGTACCTTCAGCAGTTACGGGTTAAGCGCCAGCGCCACCATCCCCTGGTTCTGACCCTTTTTAAATACGTCTAGCTAACCTGTTGATTTTTATAATGGGTTAGTGAGGCGTTGAAAAAAGGGTTTTTAAGAGGTAAGCAGCATTTATGTTTTTATAAACAATGGGTTAAGAATTTTTGTCTTCA # Right flank : ATCACAGCGAATTCCCTCGCCGTCACACTTGACCTTCCCGCAAGGGGAGGGTTTAAGCTCAACGGGTGCACGTTGACGATAAGGACGGGAAGATGCAACGCCGAGAGTTTATCAAGTACACCGCCGCGCTGGGGGCGCTCAGCGCGCTGCCGACATGGAGCCGGGCCGCGTTTGCCGCAGAGCAACCCGCGCTGCCCATCCCCGCGCTGCTGACACCGGACGCCCGCAGCAGCATTCAGCTGACGGTTCAGGCGGGTAAAACCGCGTTTGCCGGTAAAAATGTCACGACCTGGGGATATAACGGCTCGCTGCTGGGCCCGGCGATTAAGCTGCGCCAGGGCACGCCAGTCAATATCAATATCCGCAATAACCTCGCCGAAGAGACCACGGTGCACTGGCACGGTCTGGAAGTGCCGGGCGCGGTGGACGGCGGGCCGCAGGGCATTATCGCGCCGGGGCAGACGCGCAGCGTAAGCTTCACGCCTGAGCAGCGCGCCGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 88295-87726 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVCN01000007.1 Cronobacter sakazakii strain MOD1_LR636 LR636_contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 88294 28 100.0 32 ............................ TAGCATGAGTGAAAAATGTACGCCGCCTGTTC 88234 28 100.0 32 ............................ TTGGCGTATCCTGACCCATACTTACCCTTACC 88174 28 100.0 32 ............................ AACGCCCACGGTTACAATTACGTGTTCACGGG 88114 28 100.0 32 ............................ GACAACGCCGCCCGCGCCGACGCGCGCCTCGG 88054 28 100.0 32 ............................ TGTCTCAACTGGTCGATAACCACAAAGCAGGG 87994 28 100.0 32 ............................ TCTCGCCAGGCGTTTGCGACGTCACCGCCAAG 87934 28 100.0 32 ............................ AACTGCTCGCACTGCTTCGTCTTTTCGCGCAG 87874 28 100.0 32 ............................ GGTCGCTATCACGCCTGTAAAGGCCCGCACGC 87814 28 100.0 33 ............................ GCCGAAACTTTTAGCGGCCTTGCGGGCAACTGA 87753 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGAAAAACAAAAACCGCCGTCAGGTCGGCCATGTCTTCCGCTTCTGATTCACTGAGCGCAAAACTGTTAGTGGAAAAGGCCAACAGACAGCCCAGAAACATTAGCCTGACTACTTTTCTCATCACGTCTACCACTCGCCAACCAATACCCAACGATAGCACATTTCGTTCAGGCGCGACGAGGAGATTTCTTGCCTTTAACGCGCGGATAACTGCCTGTTTCAGGCGATGTTGTACGAACATCATCGACCAGAAAGCAGCAGAAAAATCCCTCTATACGATGCGGCAATCGCGCACGTTAACGCACCGAAGAGCAAACCACTGAACGAATGAAACGATAAAAGTGATGGGCGTTGCGCCTGGGCGTCTAAACCCTTTTTTATGCTCCGCTTGTAAGACGTTGATTTTTAATACGTGCAGTTGTGGTGATAAAAAAGGGTTTCAGGCGTTAAAAAGCAACAATTTGTTTTCAATTCAGGCATTCCGGTAATATTCGCTCTT # Right flank : ACTCCCAGCTACCCGCCGGGGTTGGATACGCCGTCCACTGCACACCCGCAGTAAAAAATTTTAAGCCCGAAGTAATGCTTTTATTATCGTTATATAAATAACGCCGCAATATCACGGTAAAATTATCCATAAAATTTATGGTTTCTGCTGTACGAGCTTTGCTGGAAAATTCGCGCCAGATATTAATGCGGAGCTAATTAGCTCATATAACGGCGATGACACGTAAGAACCACATTAACTACAGACATTTGCAGGTTTATTGCCTGTCACAGGGTGTCGTTAGAGTAATCAGTAATTATGTTTGATTGCAGATAATAGCGAAGGCCCTATAAAAGTTGACATTTAGTGTCATTCATTAATAAAGCGCGGGAAATGAAAGGGATGTCACGGCATATTTAAAGGCTTAATAATAGACTCATCTCTTATTTATATTTCAAAGAAATATAAATACAGGAATCATCTAACGGAATGATGTAATGGATCGGAATGCCGTAACGCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //