Array 1 700-42 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDES01000008.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold8_size175775, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 699 45 87.2 29 ...A.-...CA....T..-............................ TAAAGTTAGGATCATAACACATTGAGGTT A [690] 624 47 100.0 29 ............................................... AAAGAGTGCATTTGTTACAAGGAACAATC 548 47 100.0 30 ............................................... ACAAAAGACGAAATAAGATTCACCGTAAAA 471 47 100.0 30 ............................................... AAGCGTTCAAAAAATTCGCATGGCATAATA 394 47 100.0 29 ............................................... TTGAAATACTTTTGATAGGTTACGCGATC 318 47 100.0 29 ............................................... TTTAATGTGATTTTGACCGTAGCGTTATC 242 47 100.0 30 ............................................... CGCAGCAAAGAAAATAGAGTTAATAGTACG 165 47 100.0 30 ............................................... TGAATAGGCCGGGAATTACCTAAAGCCACT 88 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 9 47 98.6 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : GTTCACAAGTTACATAGGTGGGGATTCCATAATTGGCGATCTCCTGCATAGCAGCCGCACGTTCTTGAGGTACCAGAGTATTCCGCATTATATCCGGATAAAAACGGTTCGTCTCAATGGTCGTACAAAGAACGGATTTCTTCATAACCGGATGCTCCAGATATTTCAGAAAACGGGCGGGATTCTTTGACTGGAAGAGATACTTGTTATCAAAACCGTCACAATAGTCCAGTATCTGCTCAATCCATTCTGACGGGACATTAGCCGCCCATTCATCCGTACTGCTGCCTACAAAGATAAAGTTGCCTTCACCCAGATTCACTTTCAGTTCCTTCAGCTCCAGACGCAAGGGAGGCAGGAGAAGTTTACGTCTCATAAAACAATATGAACAAGAGTGTTCACATTCGCCTTTCATCGGGTTATATGTATGTGAAACGAAGGCATACATGTTCCCGGTACTTTTATTCAGTGCCATATATCATTATGCTTTTCACATCCAT # Right flank : CGGGGCAAGCGGCGGACATTACAGCGGGAAGTTGTGATTTGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 11859-9897 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDES01000096.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold96_size11899, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 11858 47 100.0 30 ............................................... AAAGACAATCATTTGGCACAGGCTAACATG 11781 47 100.0 30 ............................................... TGGCGTTCAGGACCACAGCGGGCGATTATG 11704 47 100.0 29 ............................................... TCCTGTTTAGATAGCTGACGCTAGCCCCT 11628 47 100.0 30 ............................................... TTAGAAATTGAAGTCCTGTTAACCAAGCTA 11551 47 100.0 30 ............................................... CTTCTTATCAATATGGCGGATGTTGCTACA 11474 47 100.0 28 ............................................... TATCGGGAGTTGGTGCGGATTCTGTCCG 11399 47 100.0 30 ............................................... CACGATCGAATCCCGTTTGTAGTCCTCATT 11322 47 100.0 30 ............................................... AGATCAGTCGGTTATGTTCACATTATACGA 11245 47 100.0 30 ............................................... TGGTGGGTCGAAAGGTGGTACGCTGGTAGT 11168 47 100.0 30 ............................................... CTCAACTTTCTTCTCGACCTCAACGGGATA 11091 47 100.0 29 ............................................... CCATTAACACAATTTCTTATCGCTCCTCG 11015 47 100.0 29 ............................................... CGTCTATGAGACACAGTTGGCTGAGGAGC 10939 47 100.0 29 ............................................... CACTTGTAACAGGTTTGAACAGGAATACA 10863 47 100.0 30 ............................................... CGGAGCGTCCTCACATTTGTACGCATTGTG 10786 47 100.0 29 ............................................... TCCAGAGGTAAATGTTCCTGAAACACTTT 10710 47 100.0 29 ............................................... CGGGCAAAGCGGTTCTCTACATAGACCGG 10634 47 100.0 30 ............................................... TGGTCAAGTTCGGTGATGATAAGCCTATCA 10557 47 100.0 30 ............................................... TCAAGCCGTCTATAATGGGACACGCAGATA 10480 47 100.0 29 ............................................... GTTTAAAAAAGTATGAGATTATCACAGTG 10404 47 100.0 30 ............................................... TCTGAAATGGAAGGCCGTACGTATGACTTG 10327 47 100.0 30 ............................................... CTAAAAGCGCTAGTAATCCCCATTTTCGGA 10250 47 100.0 30 ............................................... ACAACCTTTGGAGAAATGGATATACGGTTA 10173 47 100.0 29 ............................................... TGTAAATTCGTTTGGCAACTGGTCAGTAC 10097 47 100.0 30 ............................................... CGTGTAGTCCATTTGCGTTTTAATGCCCCG 10020 47 100.0 30 ............................................... TCAAGCACTATCCGATGCCAAAGGTGGGAA 9943 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 26 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : ATTGGAAACAACGGGGCAAGCGGCGGACATTACAGCGGGA # Right flank : AAAATGGAGTATGTTTACTATTACTCTACACCGAAAGACAGCACCCTTTATCGCCAATATCCGAATAAAAACATTCGTGAGATAGCTTATGAAGTTGCCAAGAAGAAGAACTTCAATCCTAAAAAGCTTAAAAGCGCCGAAGAACTGAAAGAAAAAATAGACTTGGCTAAAGAAAATTATCGATTTGTGCGGGTTGTTGAACGTGGCTCCGGTGAACAAGCCCGCCTTCGTTTGTTCGACGATATGGAATATCACCCTTCTGAAACAGAAATCTCCGCAGCATTGAAGAAAATGCTTGTTACTCCTGTGAAGGTAGGCGCCATCACAGGACATCAGGAACGTTCCACCACTAAAAAGGGAGATCAGGATTACTCACTTTTCGCCACACATGGACGCTTTCGTTATTCCATGATTAATCAAGGTTTTGATTTGGTGGAACTGAATCTAAAGGATATGAATGATATACCAAGTAATATCAATATATTACTTATTGCTGAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //