Array 1 985510-987525 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042001.1 Streptococcus agalactiae strain GBS28 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 985510 36 100.0 30 .................................... TATTAACAATTGCAGAAGTCGAAAGATCAA 985576 36 100.0 30 .................................... AGTAAAATTAAAACCATCACCAAACAGTTT 985642 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 985708 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 985774 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 985840 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 985906 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 985972 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 986038 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 986104 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 986170 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 986236 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 986302 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 986368 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 986434 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 986500 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 986566 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 986632 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 986698 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 986764 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 986830 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 986896 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 986962 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 987028 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 987094 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 987160 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 987226 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 987292 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 987358 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 987424 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 987490 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //