Array 1 52276-50146 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIPE01000161.1 Vibrio cholerae strain 2523-87 split_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 52275 28 100.0 32 ............................ AACAAGACCGCCGCACCAATCAGTAAATCAAG 52215 28 100.0 32 ............................ TCGGAGATGCTACGCCGCCTTCGGTGTACTTC 52155 28 100.0 32 ............................ GTCTCGTAGTTTCATGATTGCGGTTCCTCGTT 52095 28 100.0 32 ............................ GTACCCTTTAACCGACTCGGCAAACAATACCG 52035 28 100.0 32 ............................ ATGCACCTCTAACCACCAGCTTGGCTCACGCT 51975 28 100.0 32 ............................ ATTGTTAGGGTTTTGTTTTTACTTTCCATTCA 51915 28 100.0 32 ............................ AAGAACTGTAGCTAAGTTTGCAGTATCACTGT 51855 28 100.0 32 ............................ CAACGCATCCATGTGCGGCCGTTCTGCTCTTT 51795 28 100.0 32 ............................ ATAAGCGCGAGTGGTGCGAACGTTTGGCGAAC 51735 28 100.0 32 ............................ CTGAAGACATTGCGCGCATGAATCTGAAGCTT 51675 28 100.0 32 ............................ TGTTGACATTTTTTCCCAGAAGAATGAATCAG 51615 28 100.0 33 ............................ AAGGGGGCAAAACCGAATAGGTGCCGTGAGGAT 51554 28 100.0 32 ............................ CGTAATGAACTGTTTACCGCGCGTTACGATAT 51494 28 100.0 32 ............................ CCGCATTTGCACTAGATGTTGATATATTAACG 51434 28 100.0 32 ............................ TTTGGTTGTGACAACATCAAATGTCGCTCTTG 51374 28 100.0 32 ............................ AAAAACAAGTTACTTTTCGACAATGCAAAAAA 51314 28 96.4 32 .............T.............. TTTAGTTGAATTAGGGTACATCATTCCCTTGT 51254 28 100.0 32 ............................ TGAATCACTTTACCTTGAAACTCAGGCTTTCC 51194 28 96.4 32 ...T........................ AAGCTCCAAGCATTTGCGTTCTTTGTAATAAG 51134 28 100.0 32 ............................ TTGCTCGATTAGCGGTATTAACTCAGCTTGTG 51074 28 100.0 32 ............................ ATTCAGTTTCCATATGTTATAACTTTGTCCTA 51014 28 100.0 32 ............................ GCTCAGATGCAAGCACCCGTACAGCAACCTGC 50954 28 100.0 32 ............................ ATTCGGTGAGTGTGGTAGCGGTACTAGTCGTC 50894 28 100.0 32 ............................ ATGCGCTCAAGCAGGTCGTTGGTTGCTGTTTG 50834 28 100.0 32 ............................ TTTTTCAATGAAGGCGTTAAACGCAATCTCTT 50774 28 100.0 32 ............................ GTTACAGGTCTTGAACTCGAAGAAGCCGTTTA 50714 28 100.0 32 ............................ TCTGCGCGGCTGCGTGGTGCGTGGTACTGCGG 50654 28 100.0 32 ............................ GTTTGCTAAGTTGATTTTGTAATCATTCTTCA 50594 28 100.0 32 ............................ ATAAGCTTTGCAAAGAAACTTTTCCCACTGCT 50534 28 100.0 32 ............................ AATAAAAAATCCGCGTCCGAAATGTCGATATC 50474 28 100.0 32 ............................ CGTTAGGGCATTTACCGTTATACTTCTGACTT 50414 28 100.0 32 ............................ ACTTACCGCAGCGCCCAAACGACCACCAATAC 50354 28 100.0 32 ............................ TTTGAATTCAAAAATTAAGGGAAAGTAGCCCT 50294 28 100.0 32 ............................ AATACCTGCATTTTGTTCATGTCTAATTTGTA 50234 28 100.0 32 ............................ TACAGAGAAAAGAATCCCCAACGGACAAGGGT 50174 28 92.9 0 ......................G.A... | T [50154] ========== ====== ====== ====== ============================ ================================= ================== 36 28 99.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCTTATTGAATGATCTACAAGGTTTATGCTGGTTAGGGCCTCTCAGCGGTTATTGCCAAATCAGTGAAGTGTTAAGCGTTCCTGAGCAAGTTCAATACCGGGTGATCTCAGCTAAGCGCCGTAATTTAAGTGCTGCGAAGCTGCGCCGTTTAATTGCACGAGGGAGTATAAATAAAGAAGGTGAGCAGCGTTATAAAAAGAAGATGCTGAATCAGAGTATTAAAGGTCCATATCTTGACTTACTCAGTAGCTCGACAGGACAAAAATATCGTAAATTCTTTGAATTTGGTGAAATTCAGGACGTGCCTGTACTTGGAAATTTTGATACCTATGGACTAAGTCTTAAGGCAACAGTACCTTGGTTTTAACCCTATTTTTTCGCTCTTTAAAAATATGCCTAAAATACAATGAGTTACAATAGGTGTTTATTAACAAGGTAAAAATACAATTTTTACCCTAACGGACTGTTGTAACTTACTTTTATAGATTTATTCTATA # Right flank : TCTTTATATATCTTATGGTTGCAGATCTCAAAAGTTGGGATTATATAAATGACAGTTTGCTTTGAGATTTCCCGCTTACTGGCTGTATATCCGAAATTGTGGTAGCGTTTCCCACACTAACACCAGTCTATTAATTAAGCCGCTGCCCTTCGGGGTGGCGGTTTTTTTATGCCTGAAATCTGGAGCCGCACATGCAAGACAAGAAGTTATTGGGCGATGAACTCTCACTAAAATCGACCATTAATGCCTCTACGGATATGAGTCAGTCTGCCTTTTTACCGAAAGGCTTTCAGTTTGAAGCCCCTAAAGCGCCGCAACGTAACTACGATGTGACGTTAGGAGATACCGCTAAAGCCGTCGGTAGTGGCGCTCTGCGTTCACTGGCTGGCCTTGGTGAACTCTCGGAGAACTTCCTTGGTGTGGGTGAGGGCTTTCGAGATTTGATGTCCTCTGGCTCGGATTCTCTGCAAGAGAGTATGACTCAAGATGGCCGCGAAGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //