Array 1 228539-228263 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAPL010000023.1 Pseudomonas sp. D2002 run0228_D2002_S37_L005_contig_24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================= ================== 228538 24 100.0 39 ........................ AGTGACGGCGACCTTCGGGCCAGTTGCTATGCGCAAATG 228475 24 91.7 39 .....T..............C... AGCGACAACGATCAACGCGCTTATTGCAACGCCAAAATC 228412 24 100.0 39 ........................ CAGGGCAGTACCCTTCGGGCCACGTGCCTGGCGGAAATG 228349 24 95.8 39 ....................C... AGTGACAACGATCAACGCGCTTACTGTAATGCCAAAATC 228286 24 87.5 0 .....T..............C..T | ========== ====== ====== ====== ======================== ======================================= ================== 5 24 95.0 39 AACGGCCAAAGCTGCGGCAATATC # Left flank : GTCCTACGAAAATACAAGTCCTGAATCGATTCAAGGTTTAAATGCCCTGAACGAAGAAAAGGATCGTTTGGAGGCATTGATACGTAAGAATCACGAAGTTCAGTCTGCACGAAAAAACGGCTAGAGATACTCCAACCAAATCTGGACAGAACATGCAACTGAATCGCCTCAGGTTTCGTAGGTCATTTGAATGACCGATATTGGCCGGTAGCCGTCACCCTGCATGCCTACAAAGCCAGGTGTCGCCGACAACAAAAGACTGTCCGCACGATAGTCACATCCGCCCCGTGGAACTTCCCCAAAAAATAATGTCAATTTGATTGCTCGCCACAGCGACAAAATCGTCTTGGATCTGTCAGCGTCAGGCTGTGTCCTGACACCCCATGGAGAGAGTAATGAGAGCCATTATTGCGCTGTTATTGATGTTGAGTACCTACGCTCATGCGGGTTGCGGCAACATCACTGATAGCGATCAACGCGCTTATTGCAACGCCACGACT # Right flank : CAAGACAGCAATTTGCGTAATGAGTGTGATGCCCTGAAGCGTTGATCTACACAGTACGCGGGCCCCGCCGCTCATACGCCAGCACCTGCGTCGTACAGTGCGCTGGCTCCGCTTAAATGCTTACCAACGTCACCCTGCCAGGCTCCAATCGGCCGCTGGCAACCCGCGCGGATCACCAGAAAGCGCTTTAATCATTTGCCGCACACGGCCGATAGAGACCGTGTAAACGCCCACGTGCGCGGTCAGAAGGATAGAACGGTTGAAATCGAATACGTTGCTTGCGATCGCTTTGGTTTGCCTGACAGGCTGCACTTCACAGGATCCAGCTCTCGTAGGGAAATGGAAAGGTCAACGTGATCCGGCGAGCAAATGCCAGTTCCTCGCCTGGACCACCGAACTGAGGCCCAACGGGAATTTCAGAACGGATTTTTACAGCGATGCTGAAAGGACGCACCGGATACATAGAAGAATGGGCTATTGGACGGGAAGAAAGGAGATGA # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACGGCCAAAGCTGCGGCAATATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //