Array 1 232016-231087 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWXY01000006.1 Pseudomonas aeruginosa strain PPF-20 scaffold_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 232015 28 100.0 32 ............................ CTCTTGCGCCGAATCATCAGCAGCATCGAGTG 231955 28 100.0 32 ............................ AAGACGATTTAGTAGGGCTGCTGGTTGCCGGC 231895 28 100.0 32 ............................ TGTTCAACAAGATCATGGCAGGGCTTAACAGG 231835 28 100.0 32 ............................ AGGAACCGGGAAGACGCATTTGGCGACAGCAA 231775 28 100.0 32 ............................ GACCCGCGCATGCCGGCGGCGAACGACCGGCT 231715 28 100.0 32 ............................ TGTGACATGTTCTGCGGCGTGTACATGTGACC 231655 28 100.0 32 ............................ GAGCAGTAGCTGATGAAATCGACCCAGTCCCG 231595 28 100.0 32 ............................ TCGGGGCTATGCCCATGTCTCTGTCGTGGTGT 231535 28 100.0 32 ............................ ACATCGCGGTCAACTTGGTGCCAGCGCCAGCC 231475 28 100.0 32 ............................ ACCCGGGCGGCGATGTTGGGCAAGTTGCAGGA 231415 28 100.0 32 ............................ TACAACGCCAAGCTCCAGGAGTAGCGGGACCG 231355 28 96.4 32 ......................C..... AGCTCCGGCACCCCGGCGCCCATTGCCAACAC 231295 28 100.0 32 ............................ ACAGAGCAACGCCCATGCGAGGATTCATACGA 231235 28 100.0 33 ............................ GCGCATGTCCATCAAGGAACTCGCCGCCAACAT 231174 28 100.0 32 ............................ TATCACCCAAGCCCGCGACGTCGACGCGGAAC 231114 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGTTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAAGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACTGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //