Array 1 25246-24180 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123104.1 Streptomyces sp. ADI97-07 scaffold007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25245 29 100.0 32 ............................. ATGAAGGAGCTCGGCAAGGCCTCCCAGGAATC 25184 29 100.0 32 ............................. GTGTTCGGGCACCGCGGCGCCGGCATGGTCTG 25123 29 100.0 32 ............................. TCCGGGACGACCTCCAGATCCACCACAACATC 25062 29 100.0 32 ............................. TTCCTCGCCGACATCCAGACCCTCGGCATCAA 25001 29 100.0 32 ............................. TGTCTCCCGTGCTGCTGGTGCCCGCGGATGTC 24940 29 100.0 32 ............................. CGCAGATCAAGGCCACGGCGAAGGACCTGGTC 24879 29 100.0 32 ............................. GCGAGCGGGATGCCGATCTCGGTCTTGTACAG 24818 29 100.0 32 ............................. TACCTCGTTTTCCTCAGCACCCGCCAGTTGGA 24757 29 100.0 32 ............................. ATCCACGCCATCGTCTACGCGGGGTCCTCACA 24696 29 96.6 32 .G........................... ACACCGGCGTTGTCGAGCCAGGTGCCGACCTC 24635 29 100.0 32 ............................. GTGTTTGCGGCGCTCGGAGATCACAAGTTCGC 24574 29 100.0 32 ............................. AGGTCGAGCGGCGCCTGGCCGCCCTCGGTACG 24513 29 100.0 32 ............................. GTGATGTCGGCGGCGAGCGGCCCATCAAGGGG 24452 29 96.6 32 ..........................T.. GCCGGCGAACTGGCGTGGGTCGGCGAAGAGGG 24391 29 100.0 32 ............................. CACCTGGATGCGGCCGACTCCAAAGGATGCGA 24330 29 100.0 32 ............................. AAGGCCCTGGGCATCCACTCGCCCAGCCGCCT 24269 29 100.0 32 ............................. TACAGCGTGCACGTCAGCTGGCTGGGCAACCC 24208 29 86.2 0 ..AT.......................GC | ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : AGCGCTGACGTAGGTGGGATCGCTGCGAACTGGCTCGTAACAAGCATGGACCTGAGCCTGGAACGGTGGAGTGATCTTGCCGATGTCATGCAAACCGGCCCAGAACGAGACCACGGTGCGCGCCTCCACCATGGTCAGACCGAGCGCACCCGATACAGCTTCCCGTGCCTCGTCGCTCAGAACGACATCCCAAAGCTCCTGGAACACCGCCCCAGTGTCGAGAAGGTGACACACCACCGGATACGGCCGCGGCAGCCCGCTCTCCTTACCCCACATACGAACATCGAGAACACAGTCCCCCGACGGGCCCGCTCCATCGCGACTCACCATGCGCTCAGAGATAGCACCCCCCACTGACAACGGCCCCAAATCGACTATTGACAATGCAATATGAGGGCTGAGCCTTACACTCGCTGCGCTACGACGAAGAATCGAGATGCATGCACTACGGGATCAGGCAAAGAAACTGCAAAGGGCCCAGATAAGGGCAGGTCGCGAAG # Right flank : CGGAGCGGCCCATGTCGGCGTATGTGGCTGCGCGAACACCACATTTGACGCTGAATTGCGCCAGAGGATCGCCCCGGCTGGCGGCTGGTACACGCGGAGGCCATGTGCACCGTCCTTCGGGCCGCCTGACCGCCTGCCGGGCGGTCAGAAAACCTCCTGCGGGGGCCGCCCCGACCCCGCATGCCCTTCACCCCAGCCTGTTCAACCCAGGCCCGGATGTGGCTCTGAACCTCCTGCAGCCGTTCGCTGTCGCACACCCACCCGAAGCGTTCGACGGGCGTGAGAGTGTTACCCAACGTGAAACAGGATGTGCTGGAGGGACAGGACGCCGTGGGGGCAGCAAACTCGGGAAGTCCCGTGCAGCTGACACGCACGCACCGGATCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 34178-36097 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123104.1 Streptomyces sp. ADI97-07 scaffold007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 34178 29 100.0 32 ............................. GTGAGATCGTCACCATGGACTCGCCACCCAAA 34239 29 100.0 32 ............................. GTCTGCATCAGCGCGTACTTCAACGCTGCGGA 34300 29 100.0 32 ............................. CTGGGCGAGCAGGCGGCCCGTGAACACATCGC 34361 29 100.0 32 ............................. CAGCTGTCGTACTCGTCGTAGTCGGCTGGGTT 34422 29 100.0 32 ............................. CGGATCACGGACCTGCATGGGCCGGTCCGGCA 34483 29 100.0 32 ............................. GTGGCGATGTCGCCGGAGAAGAGGGACGTGAC 34544 29 100.0 32 ............................. TCGGGCGAGCATGCTGGTCTGGTCGCCGAAGC 34605 29 100.0 32 ............................. TGGCGCAGCTAGTCGGGGACGAGGAGGCCGCC 34666 29 100.0 32 ............................. CGAGAGTGGCCATGGACCGGACCCCCTCTCGC 34727 29 100.0 32 ............................. GGCGCGGTTCCGGCGGCCCGGGTGCACACGGA 34788 29 100.0 32 ............................. GGGCAGTCCCTGGCCTGGCTGTCCGACCACCC 34849 29 100.0 32 ............................. TCCCCGGTGCGGATGGCGCGCATCGCCGACGC 34910 29 100.0 32 ............................. CAGTCCACGAACCGCCCCCGCTGACCACTCCT 34971 29 100.0 32 ............................. AGGTGACATGGTGCGCCGTGGGATGACGGTGG 35032 29 100.0 32 ............................. TCCGAGTCGCTGGTGATCCTCGGTGGCGACGC 35093 29 100.0 32 ............................. CGACGCCGATCCACTGGACCGGGATGCTCGAC 35154 29 100.0 32 ............................. AAGTCCGGCGGGCCCTGCGGTGAGACCACCCC 35215 29 100.0 32 ............................. GTCTGCGCCGAGACAGCACTTGCCCAGCAGGC 35276 29 100.0 32 ............................. AGCGTGCTGGCCACCGTGCCCGACCCGGAGGG 35337 29 100.0 32 ............................. TACGGCTTCACCGTCACCACCTGACTCACAGA 35398 29 100.0 32 ............................. CCCCTCGGTGGCAGCTTCCAGATCGACCGCGT 35459 29 100.0 32 ............................. CGCGTCACCGTGGCCGGCCTCGACCTCGACAC 35520 29 100.0 32 ............................. ATCAGCAGGCCGCTCACGGGGTCACCGGGCAG 35581 29 100.0 32 ............................. GTGATCGGAGTCGGCTGCCACCTGTGGGTGTA 35642 29 96.6 32 ...............A............. GAGGCTGTGTGGTCAGGCTGGCAGGTGCAGAC 35703 29 100.0 32 ............................. CGGTCTTGCCCGAACCGCACCCACGCGCTGGC 35764 29 100.0 32 ............................. GTGTCGGCGTAGTCGAAGCCCTTCGGGTCTCC 35825 29 100.0 32 ............................. ATCACGGGCCTGGACGACGGGGTGAGCCCGTG 35886 29 93.1 32 .................A........T.. ACCGTAACCGCCCGCGCCGCCGGCCTCGGGTT 35947 29 96.6 32 ......................C...... CTGTCGCCGAACGCGCGGTCGTTCGTTCAGGA 36008 29 93.1 32 .......T.................A... ATCGGAGCCCATGGGGCGCTGGACCGGTACCT 36069 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 32 29 99.4 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GACTCCCTCTCCTTCCTCTACCTCGACATCGTCCGCATCCACCAGGACGACACCGGAATCCGACCCCGAAGAGCAACTGGTCGACCTGTGGGGCCCCGTCTCCGGTTCCGTGCCGGCCGGCGTCAGCCACGGGACCCAACCGTGACCCGCCCATTGGAAGGGCACAGCCCATGTCCTCGATGATCGTCATCTCGGCAACCGCCGTCCCCGACCATCTGCGCGGTGCCCTCACGCGGTGGCTCCTCGAAGTCACGCCTGAGCTCTACGTCGGCACCGTCTCGGCCAAGGTCCGCGACGAACTGTGGTCAGCCGTGGCCGCATGCACCGACAACGGCATCGCAGTCCTCGCCCACCCGGCCGACAACGAGCAAGGCTTCCAGCTACGAACAGCGGGCAACCGGCGTCGCGAACCCCTCGACTTCGACGGCCTTACCCTGATTGCCTTCCAGCGAGAAAGTCAAGAATTGGCAAACCCGCTCTAACGTGCCAGGTCAAAGAGG # Right flank : GGAGGAGGTCCACGCCCTACACGATTCGGTGTCAGAGAGTGCGCTCAGCTCGCTCCTCGGCCAGCTTCCTCAACGCCCGCGCCCGCACCGCGTCACTGGCCCGCGCGCAGCCCTCGGTCGTCGCCCTGGCACGCAGCCTGCCCATCTCGCTCAGCCCGTCTCCGAAACGCTCCTCCGGCTCCCTCATCCGCTCCCGGATCTGACGCTGTGCCGCAGCACTGACCTGCGTGCCCTTGGACTGCGACGACGTCCAGGCTGCGCGGATCCGGTACGGCCGGCCGGCCGAGGCTGGCGCAACAGAATGCGAATCGGCCGGAACGTAACATGCCACCGCCACACTGGCCGACGGGGAGCTGGTGAGAACCGCAAGTCGCAGGACTTCCAGTTTGCGGACGGTGTCCAAGCCGACCATGTTGTTGATCTTGGCGACGATGTCGCGCTGATACAGATTCAGCTGCGTGGCGTAGGCACGGGTGGAAGGCAGCAACTGCAGGGTGCGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4307-4579 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123106.1 Streptomyces sp. ADI97-07 scaffold009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4307 29 100.0 32 ............................. CGGCGGACCAGGTACACACCCTCTTCGAGCTG 4368 29 96.6 32 ..........T.................. CCGATCTTCGGCAAGACCAAGAACCCGTTCGA 4429 29 96.6 32 ...........C................. CGGCGGTGACCGGGCGGGAGTCGCCCGGGGCC 4490 29 96.6 32 ..............T.............. AACATCGCGACGAACCTGGGCACGGGGACGAA 4551 29 93.1 0 ..............TA............. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CCGGCTCCTCAACCGTCGGCACCGCCACAGGAGTCGGTGACACGGACGCCGACGGGCTCGAGGACGCTTTCGCCCCAGCCTCGCCACCACCGCTCTCGCCACCGCACCCGGACACGAGCACCACAACGGCTACCGCCGCACACCCCACCCAGGTTTAGGCCGTCGACGCCGGCTGACCCGGCAGGCCGCTGACCTGCCGCAGTGAGTTTTCGCGGTGAGTGCGCACGGCGGCAGTGAGTTTCCGCCCGGGGCGTGGTGAGTTTCCCGGTCGGAAACTCACCACCGCAGGTCAGAGGCGGGGACGGCACTCACCACACAGCAATCCGCACGCCTCAACCTGTTGGAAATTTTTCGTGTCGAACCTGAAATACGATGTTCAGAGTGTCATGTGGGGCACTCGGGCGTACGGCCCGCGTGGGCGCCTTTTGGGTGTTATGCCGGTTTCGGTGAAAGTGTGTCAGGACCGCTGTGTGGCGCGGTAGCGTCGCAGGTCACGGAGT # Right flank : CAAAGCCGCCACCGCCACCGGCGACCAGGCAGGCTGCTCCCCGCTCAGCTTGTTCTTTATCTACCAAGATCTTCCGGGCTTGCCGATGACTTTGAGGGTCTCGGGGCGTTTGACGGTCTTGCCGACGTCGTAGCGGGGTGCCCGGTGTTTGTTCTTGGCGCCGGGTGGTCGTCCGGGGCCTGCTCCTCGGGGTTTGGGAACACGGGCCGGACAGGCGAGGTGAGCGCGGATGTTCCTGAATCCTCGGCGGACCCGGGCCGGGGTGAGCCGGTCGGAGGTGGTCGGTTTCTCCCAGGGCCGGCGGAGGTCCACGGCGAGGGGCCGGGCGAGCCGGAGCTGGGTGTGGGCGACGATCAGGATCCAGGTCCAGCGGTCCGCCGCCTCGGGAGTGCGGAGTTTCGGCGTCGTCCAGCCGAGGGTCTGTTTCGCGAAGCGGAAGGTGTGCTCCAGGTCGAAGCGGCGGAGGAATGCCTGCCAGAAACGGTCCACGTCGACTGGGG # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 14406-14800 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123106.1 Streptomyces sp. ADI97-07 scaffold009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14406 29 100.0 32 ............................. TCGGGGCCGGCGTGCCCGTGGTTGGCGAGCAC 14467 29 100.0 32 ............................. GCTGGTCTCCTCGCAGTCCTTGCTGTCGATCT 14528 29 100.0 32 ............................. TGGGATGGATCGAGGGGGCTGGCGCTGTGGGG 14589 29 100.0 32 ............................. GAGGGCCCGGGCCGCCGAATCGGCGGTCCGGG 14650 29 100.0 32 ............................. TTGGCCGCGGTCGGAGGGGCGGCGTGAACAAC 14711 29 93.1 32 ..............T..........C... ATCGCGCGTCTTCTCCTCCGCCTCGGCGAAGA 14772 29 93.1 0 ..............T..........C... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.0 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : TCACCCTGCGCCCCCCCGCCTGGAGAAGCCCCTCAACATCGTGGGCGTATTCGCCGGGGTCCTCGTCGCGGCCGTCGTGGGCCTGGTCGCCGTCGCCGCACTCACCACCTGACCCCCGCGGGCCGCGCCCCGGGGCCACGACGTCCACCAGGTCCCGGGGCGCCACCGCCCTCCGACCGACCGGCAGGCCTCTGACCTGCCCCGGTGAGTTTTCGCAGTGAGCGCGCGCAGTAGTGAGTTTTCGCCCGGGGCGGTGGTGAGTTTCCCGGTCGGAAACTCACCACCGCAGGTCAGGGGCAGGGGACGGCACTCACCACAGCAATTCGCAGGCCCGCATTTATTGGAAATGTGTCTTGTCGCACATGAAGTACGGTGCGCAGAGTGCCATACTGCGTTCCCGTCGCACGGCCCCCCATGGGCGCCATTTGAGTGCTATGTCCGTTTCAGTGAAAGTGTGTCAGAACCGCGATGTGGCGCGGTAGCGTCGCAGGTCACGCAGC # Right flank : CAGTACTGGGCCACGGGGGCCGCCCCAGGGCCCCGGGGAGAGTCGCGATCGCCCGGTTTGATCATGGAATTCCGTGGAGGGTGAGGGTGGCTGCGGGATGGGTGTGGGCTCGTCGGCCGCTGGCGATGTTGGCCCATCCGGCGCGGTGGAGGGTGGCGCGGGCGAGATCGCGCAGGGCACTCATGACCGCGGGGGTGTGGTGGCGGCGGATCTGGCTGTCGTCTTCGGCGAAGGTCACGTCTTTGGTCCAGTGGACGGTGTTCTCAATGATCCAGTGGCCGCGTACCCAGGCGGCGATCTCAGCAGGAGACGCCTGGTGGGCCGCGAGATCGGTGACGGCGTAGACCGTCTCGGTCTGCCACTTCGATGTGCCGATTCGGCGGCGTTTTCGGTGGATGCGAACAACCTGGCGGGCATGAGGAAACAGCAGGCCGTCCACGCTCACCACCTTCACCTCGCGGACCTCGTCACGGCCGTGTCCGCGGTCGCGGGAGCGGTTG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : CTGCTCCCCGCGCATGCGGGGATGGCCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //