Array 1 82059-82528 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZDH01000012.1 Tepidimonas fonticaldi strain PL17 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 82059 37 100.0 35 ..................................... GACAGCTCTGGCGGCCACCGGAGCGGGTGGGCTCA 82131 37 100.0 35 ..................................... TTGAAATACGTCGGCGGCAAGCGCTGGCTTGCGCG 82203 37 100.0 35 ..................................... AAGAGCTACGCGCTGCGTGACTGGGCGCGGTTTTG 82275 37 100.0 35 ..................................... ACCGTCAGCCGCCTGGCGCGTGCCGACCTGCTGCA 82347 37 100.0 36 ..................................... ATGGCGACGCGCCGGGCGCTGGCGAGCACGATCTGG 82420 37 100.0 35 ..................................... AGCAGCAGCGGCCTGGCTTTGCCGCCCCGACGGAC 82492 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 100.0 35 GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC # Left flank : ACCTGCCTTACCTGACGAAGTAGACATAGCCATGCTTATCATCGTCACGTACGACGTCTCCACCGAAACCGCCGCCGGCCGCAGGCGTCTGCGCCGGGTCGCCAAGGTCTGCGAGAGCATGGGCCAACGGGTACAGAAATCGGTCTTTGAGTGCCAGGTCAACGACATACAATACGAGGCGCTGGAGCGCGCCCTGCTGGCCGAGATTGACGAGCAGCAAGACAACCTGCGCTTCTACCGCATCACCGAACCGGTGGAGGTGCGGGTCAAAGAGTACGGCGTATACCGTTCCGTGGATTTTGAAGGGCCCCTGGTCGTATGACGCGCGTACCGCCAGTGACGGACAAAGCTCGGCAGCTTCGCGCACGCCGTAAGTCCTTGTTCTATAAAAACATGGACACCAAGATAAGCTATTGGAGCAGAGGAGGATCTGTGCGAAAGTCCTGCTTCGCGCAGACTGCGTTTTCTCCTCAATCAAAACAACAGGTTGCGATTGCGGA # Right flank : CCTTCAGCGCGCGGATGTGCTCGATGGCAAGCTGCGCGGCAGGAAGATCAAGATTCTGTGGGGTGGCTGGTGATGCGCGGTGGGACTCGAACCCACACACAACCCGCTGGCGCGGACCCGTTACCTGTCAGGGCGCAGCGCATCACCGCCTGCGGTCAGTATAGCCTGAAAAGAAATGAGGCGGCACCTGGGCCGCCTCGCGGGGCTGGCGCGCCGGACTCCCGCGCCCGGCGACGAAACCTTTGGGCCCCAGGTCTGCCCTCACCAGATGGAGGGAGATTTTGCCGCCAGCCCTTTCTGTCAGTATAGCCTACCCCGCCCGCGCCTCAAACCGCGCCCACGTCGCATGCAATGCGTGCAAACACCGACCTTGAGGAGCCGGCCATGATCGACATCCAGCTCCACGACCGCCAAGTGCGCGCCGCGCTGCAGCGGCTGCAGCAGCGCCTCTCCGACATGACCCCGGTGATGAGCGCGATTGCCACGGCGCTGGAAGCGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-19.30,-20.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 83747-84432 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZDH01000012.1 Tepidimonas fonticaldi strain PL17 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 83747 37 100.0 36 ..................................... TTTTCCCCGACCTACAAGCTGCTGGCCGACGTGTGG 83820 37 100.0 35 ..................................... CTGCTGCGCTTCACGGATGTGGAGATGCAAGCCAT 83892 37 100.0 34 ..................................... CTATCTCGAACGCATGGCGTCGTTGATCGTGGGG 83963 37 100.0 34 ..................................... ACGTGAGCGTAGGAATAGTCACAAGGGTGGACAA 84034 37 100.0 35 ..................................... AGTATCTGCGGCAATTGCAAACATAGGGGGACGCC 84106 37 100.0 34 ..................................... AATGATCATCACTTCAAAGTCAACGTACGCATAG 84177 37 100.0 36 ..................................... GGTATCAGAATGGCAAATTTGGTAGTCGTGCAGATA 84250 37 100.0 37 ..................................... AGAGTAATCCCTATTTCGACATATCAAGAACAAGGGA 84324 37 100.0 35 ..................................... AGATACGCATCGATCTCCGCATCGGCATCGGTGAG 84396 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 10 37 100.0 35 GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC # Left flank : GGCGCGGGTGGGCTTTGGCGTGCCCTACGCCGCGTTCCACGAGTTCGGCACGTCGCGGATGCCGCGCCGGGGCATGCTCATGGGCGACCCGCAGGCCCGCACCCTGGGCGAAGCCGCCCGGCAGGCGGTGCTGGACACCCTGCGCGAGGCCATCGAGCGGGCCGCGCGCGGCGGTTGAGGCTGGCCGCGACCGCAGGCGCTAACATCAAGGCTTCGCCCAAGGGAGGAAGCCGTGATGCGCACGCTCGTTTTGTCGGTCATCAACCTGACGCTGCCAGAGCCGCACGGGCCAAAGCGCTACGTCGAGGCCATGCGCAAGGCCTACGCCCAGCAGCGGGTGGTCAAGATCCGCGGCGATTTTGCCGGGATGATCGGCTCGCTGCGGACCGACGAAAACGACCCAACGATCCTGCTCGGCGAGTTCTACAAATTCATGGATCTGCAAGCCGAGCGCGGCTGGTTCGACCTGCGCGAGCGCCGACCAGCTGAGCCGGATGACC # Right flank : CAGCCCCAAGCGCTGGTGGACTGGGGTGACGACGTTTGTGCCGAGAGACAGGCCGACTATGACCGCTGACGAGTACATCGCGCAGCAGCGCACCGGGAAGCGGCGATGGCCGAAATGAAAACGCCACGGCGCGGCGTCACCGTGGCGTGCCCGGCAGTCCTTGGGGGCGCTCGCCGCGCAGTGGCTGCCGATGGCTGTTTGCAGTATACCATACCCCGTCAGCGCATCAAAGCGCGCCGTCCGGCTAAGGAGGCCCATTGAAAAAGAGTGAGGCGGCACCTGGACCGCCTCGTGGGGCTGGCGCGCCGGACTCCCGCGCCCGGCGACGACACCTTTGGGCCCCAGGTCTGCCCTCACCAGATGGAGGGAGATTTTGCCGCCAGCCCTTACAGGCCAGTATAGCCTGTCCCGTCAGTGCAGCAAGCAGGAGGTTGCATGATCAAAATCGAGGTCGACGATAAAGCCGTGCGCCGGGCGCTCGATGACCTTTCGCGCCGCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-19.30,-20.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 85983-89335 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZDH01000012.1 Tepidimonas fonticaldi strain PL17 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 85983 37 100.0 37 ..................................... AGCCAGCACAAGCTGGTGGCCGACGCGCTCATCGCGC 86057 37 100.0 37 ..................................... CTCACGCTTGGGCGTGGACATGGCGCACCCCTCACGC 86131 37 100.0 35 ..................................... AAGCATGGCATCGAGGCCTTCCCCGGCGTCATCGA 86203 37 100.0 38 ..................................... CGGTGTCGTCGGGGCTGTAGACAATCAACTCCAGTTGC 86278 37 100.0 34 ..................................... CGGTGTGGTACGGCGGCACGGTGCGGGCGATTTG 86349 37 100.0 36 ..................................... TTTTACTCACCAATCAGCATCCCCGCCTTCGTGCCG 86422 37 100.0 36 ..................................... TGGATGTCATCGGCCGTGATGGTGTCCTGCGTCGGC 86495 37 100.0 34 ..................................... TCGTACGCCCTGAACAGGTGCGCGCCCAGGCAAG 86566 37 100.0 35 ..................................... TGTTTGTCGAAACAGGCGCGACTCGTCAAGTGCGA 86638 37 100.0 35 ..................................... CAACCTAAATCTGCGCGCGTGCCGCATCAAACAAA 86710 37 100.0 34 ..................................... ACCGAGGTGGAGGAACTGAGCGCCACGGCGCGCG 86781 37 100.0 36 ..................................... CAATAAGACACCGTAGTTTTATATCCCGACGATGTA 86854 37 100.0 34 ..................................... AAGCAAGACGAGGCTGCGAACCTGGCCTGGCTGC 86925 37 100.0 35 ..................................... CAGTCCAACCCGGCCGATCTGCGCACCTACCAGGG 86997 37 100.0 35 ..................................... AACGCCATGAGCATCAACGTCACGCTGGGCCACGT 87069 37 100.0 34 ..................................... AATCCATTGGAGGGCGCAAGGGATAAGGGATAAG 87140 37 100.0 35 ..................................... AAGGCAGGCCACCGCCGGGGCCACTGGAGCCGCGA 87212 37 100.0 34 ..................................... AAGTCGCTGGTGCTGCGCCCGGTCATCCAGGCGG 87283 37 100.0 34 ..................................... ACGCAGTCGGTGCCGGAGGTGGCGTGGAATATGC 87354 37 100.0 37 ..................................... ATCATCATCACAGTACCTTATTACGTGATGGACCGTG 87428 37 100.0 36 ..................................... ACTAACTGGACGCGATGGAATGTGTCGTTGTGGATC 87501 37 100.0 35 ..................................... GCTGTCACCCGCGCGGTCTCGGCGCGCTCGGCCAT 87573 37 100.0 35 ..................................... CTCGTCGGGCTTGATCGCAATCGCTTTGCTCTTGG 87645 37 100.0 36 ..................................... GTCGTGAAAAATCGACCGTTCGTCGGATCAAACGGC 87718 37 100.0 35 ..................................... CTGGCGTGATAGTGCGCAGTAGACCACCCAATTTC 87790 37 100.0 34 ..................................... AGATCCTGCTGGATGTCGCGCACGCGACGGATCA 87861 37 100.0 36 ..................................... TCGAAATACCACCACTCCAGCAGTTGGCGCAGCTCC 87934 37 100.0 35 ..................................... CAGCCAAGGTCGAACACGACGTGCACCTTGAGCAT 88006 37 100.0 34 ..................................... ATCACAATCACCGTGGAGTAAACCGTGTCCCTGC 88077 37 100.0 34 ..................................... CTGTGCGATGTGGTGGAGGACTGGTCGGGCGTCA 88148 37 100.0 34 ..................................... AGACTACTTGCCATGCCGAACGCGCCCGGCCCTC 88219 37 100.0 35 ..................................... GCTTGATGCTGCCAGCAGGTGATGCTGCCAGCAGG 88291 37 100.0 35 ..................................... TCCTAGTTTCACTGCCAATTGCGCAAAGCCTCGAC 88363 37 100.0 35 ..................................... TTTGATTTTTGGTTCCGATCAGCAAAAACCTAGCT 88435 37 100.0 35 ..................................... CCGCCGAGGTGTTGGCGCGGGTGCAGGCCGCCAGC 88507 37 100.0 37 ..................................... ATGCCCACTCGCGGGTGGTTTGCCGACAAGCTTTACC 88581 37 100.0 34 ..................................... AAAATTTCCGTGCCCGAAGAATCTGCTTGGTCGA 88652 37 100.0 33 ..................................... AAAAACCTGGTCTTCAAAGCGTCCATATCGATC 88722 37 100.0 36 ..................................... AGGATGTTGGCCTCGGTGTCGGATTTCGGATCCACC 88795 37 100.0 35 ..................................... TACGAGCACGTGCGCGAGCTCAACCAGATCGAGAA 88867 37 100.0 35 ..................................... CTTGCTCCTTTGTGTGCGCGCGACCAAGCCGATAC 88939 37 100.0 34 ..................................... ATCAGTTTGCGCGGGAAACCCCGGCCTTCAGGAC 89010 37 100.0 37 ..................................... AACAAACCGCCAAAAAGCGGCTCTTGTGGCCAGGACG 89084 37 100.0 35 ..................................... ACGATCACCGGCTACGACCCGGATCTCTTCGCGCA 89156 37 100.0 35 ..................................... CGCGTGGATCTGACGCGCGCGCAGATCGTGGCCGC 89228 37 100.0 34 ..................................... GACTTCACGCCGCCGGCGCCGGCCGAGCGCGTGA 89299 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 47 37 100.0 35 GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC # Left flank : GCCGGGCGGGCCGGCGGTGCGGTTCTGAACCCTTTCCTGCTGCCTTTGACTGCCCCCGCCAGGCACCATGCCGGGCATGGACATCACCCCCGAGACCCTTCGCGCCGCGCAGGCCATTGCGCTGGAGCTGCCGCCCGATGCCGCCGGCGACGGTCAGCCGCTCGCGCCCGAGTGGGTGCAGCTGATTCCGGCCGGGTCGTTCAGCGGGCGCGACGGGCGCGGACCCTATCTATTAGATGGCGCAGCGGTGCTGGCTGCCTTCGAGCGCGGCGGCATCGACCTGCCGATCGACTACGAGCACCAGACGCTGGCCGCCACCGACAAGGCCGGCCCGGTGCCGGCAGCGGGCTGGATCAAGCAGCTCGAGGTGCGCGAGGGCGCCCTGTGGGGGCGCGTCGAGTGGACGCCCAAGGCCGCCCAGCTGATCGCGCAGCGCGAATACCGCTTCCTCTCCCCCGTCTTTCGCCACGACAAGGCCGGCCGAGTGCTGGCCTTGGAAG # Right flank : CTGGGTGGCAAACTCGCCTTCGACCGCCGTCGCTGGTATCGCCCGGCCATCGGGCATGAATACTTCGGTGCCCCTGCCCCAATCACACCCACAGCGCCGCCCGCGTGCGCTCGGCCTCGGCTCGCGCCGCCGTGGCAAAGTCGTCGCCTGTGCTGGCGTACAGGATAGCGCGCGACGAATTGACGATCACTGGCCCGGTGGTGTGGCCTGCAGCGTCACCGCGCCAGCCTGCGCGCACGGTGGTGGCGGCGTCGCCCCCCTGGGCGCCGACGCCGGGGATGAGCAGCGGCACCGTGGGGGCGATGGCGCGCACGCGCTCGATCTCTTGCGGGTAGGTGGCGCCCACCACCAACCCCATCTGGCCGTGGCGGTTCCACGGCCCCTGCGCCAGCGCCGCGATGTGCTCGTACAGCCGCGGCTGGCCCGGCACGTCGGCCAGGCGCTGGGCCTGCAGGTCGTCGCCGCCGGGGTTGCTGGTGCGGCACAGCAGGAACACCCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-19.30,-20.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //