Array 1 26-386 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUU010000023.1 Blautia massiliensis strain MSK.13.38 NODE_23_length_46411_cov_164.997, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 26 30 100.0 37 .............................. CGAGAAAATATCAGAGCTGCAACTGCTTGATTTTCTT 93 30 100.0 35 .............................. TTGTCAACAACAAAAACCTCCGGCCGCTTCTCCCC 158 30 90.0 35 .........A..C....A............ TGGGAAGACACCAAGCTGAAGACATCGGCCGACAC 223 30 93.3 36 .........A..T................. GCATCTGTCAGTAGTGTTCTTCGGAATTTGTGTGAA 289 30 96.7 37 ............C................. TCGGGATTGCTTTGACCTGTCTTGATTGTTCCGGATA 356 30 90.0 0 .....G...........A....G....... | C [382] ========== ====== ====== ====== ============================== ===================================== ================== 6 30 95.0 36 GTATTAATAGAAACATTGTGGAATGTAAAG # Left flank : CAGTAGTACGGCACCAGACCAGCAGG # Right flank : GATCAAGAACAATTTTTTATATAGGCATTCTTCCCCAGTCATTCCCTCTCAATGTTAACCCCTCGTTAAATCTTCATTCAACCTTCGCAAAGTCCATTGTATTCCAATTTTTCATCCCTATAATATACGCAGATAAAGCAATTTCAGGTGTTGATGAGATTTGAATCTGAAGAAGCTGGCTGGCAGATCAGAATTCATGTATCAGAGCTCACGTAAGGGAAGAGAGATGGAGAGCAGTATGGACAAAGTTCTGACGGTGATCGTACCTGTCTATAATATGGAAAAATATATCCGGCAGTGTCTGGAATCTCTGGTGATCGGGGGGGGTGCTGGTGGTGTTGGATGGCTCCAAGGATGGTTCTGCGGAGATCGCGTATGAGTTTGTGGAGCAGTATCCGGATACCTTCCGGATCATTTATAAGGCGAATGGTGGTCATGGTTCAGCGATCAACACAGGTCTTATGATGGCGTCCGGTGAGTATGTGAAGATCCTGGACAGT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATTGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 42245-44508 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUU010000024.1 Blautia massiliensis strain MSK.13.38 NODE_24_length_44508_cov_167.933, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 42245 30 100.0 34 .............................. AGTCTATCTATCAGACACTGGATCATGCAGACGG 42309 30 100.0 37 .............................. GAAAGAAAACGAGAAAGGAGCATGAAATGAGCGAAGT 42376 30 100.0 35 .............................. CGCAAAATTCTCTGCCGGATGTATGGATCTGATTA 42441 30 100.0 35 .............................. CTGCATAGATGGTCATGTGGTGACAGTGCAAGATG 42506 30 100.0 35 .............................. GATTTCCCGGCAACGGATTACATCACGGCGGTTGC 42571 30 100.0 37 .............................. TCCGCCAGCTGTTCGGATATGCGGCTATGGTTGAGTC 42638 30 100.0 35 .............................. ATGATCCTCGATGACTCGAAGAACGCTTCTCAATA 42703 30 100.0 38 .............................. CTGAGAACGTCAATTTGTGCGTTTCCGGGTGTTTTTCC 42771 30 100.0 37 .............................. TCGAGCTATAGGACGCTTTTGTTCTGTCTGGGAACTT 42838 30 100.0 35 .............................. TTGGAACCATATTTGGAATGGTTGGTCTTGCATGT 42903 30 100.0 35 .............................. ATAGGTCGAAAAAGTCGGTTACACGTTGGTTACAA 42968 30 100.0 35 .............................. ATATTTGCTGAAGCTATCGAGGAGTTAAAGGATTT 43033 30 100.0 38 .............................. CCTTGTAAAAGGTAAATGGGCGGACAGGCGCCCGAAAC 43101 30 100.0 35 .............................. TGATGTTGTCCAGATCCTTGGCGATGTCACGGTTG 43166 30 100.0 35 .............................. TACAGATTCATCTACAATCTGTGGAACATGGTTCC 43231 30 100.0 37 .............................. AATCATATTTTATCATTTTTTCCTCCTGTCCGCCCCT 43298 30 100.0 35 .............................. TCAGTTCATTTTCAATAGCTTCAAATGCGGCTCCG 43363 30 100.0 35 .............................. CATTTTTTTCTTTCTTTGTCAGAATCACTGTTGCC 43428 30 100.0 35 .............................. TATTCCTCCTTTTTCGTCTTTGTAGTATGTAAACC 43493 30 100.0 36 .............................. ACAATCCAGTTCCAGATTCCGCTGAACGGCGAAAGC 43559 30 100.0 36 .............................. ACAGGTAATCCGAAGCCACAGACGGTAGCGTCAAAG 43625 30 100.0 35 .............................. CGAATTTACAGAGACGGTTGTCGAATCGTTTCACT 43690 30 100.0 36 .............................. TACTTCGTTTCCGCTTTGCTGTAGTCACAATCGTCC 43756 30 100.0 36 .............................. CAATTATCAGGGGCAGGAGTGACTTGGAAGTTTTGT 43822 30 100.0 36 .............................. AAGTTCAATGCCTGTTTCGGAAGAGATACCGGCCGC 43888 30 100.0 36 .............................. CCATACCTGGGTTTTTAACGAGGTCCCGCATCCCTC 43954 30 100.0 36 .............................. ATGATCCTGAACCTTTTCATTCCGATCAGAGAATAC 44020 30 100.0 34 .............................. GAATGCGGGCAGTAGTACGGCACCAGACCAGCAG 44084 30 100.0 35 .............................. ATTGATTCTGCAATTTCTGTTTGTGTTTTTCCAGA 44149 30 96.7 37 .................A............ TACTATCACGCTTTCTTCCACATTCGCTGTAATCGTC 44216 30 100.0 40 .............................. AAGAAAGACCTTCCGACGCACGTTACGATCAGGAGCACCG 44286 30 100.0 34 .............................. AAGGTCCGCATTGCTGCTGCCACGTAATCCGCCC 44350 30 100.0 35 .............................. TATTTTCTTTTCACTTTTCCCTGGAACTGGCTGCT 44415 30 100.0 34 .............................. GAATGCGGGCAGTAGTACGGCACCAGACCAGCAG 44479 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 35 30 99.9 36 GTATTAATAGAAACATTGTGGAATGTAAAG # Left flank : TGGTGAAAAGGAATATGAAGGATTCAGGATATGGTGGTGAATTATGTATGTAGTTTTGGTTTATGATGTAAGTCAGCAGGAAAATGGTGCAAAGCGTTGGTCGAAGATTTTTAAGATTTGCAAAAGGTATTTGACGCATATCCAGAATTCTGTTTTTGAAGGTGAGATTTCTAAGGCTCAGCTGGCACAGTTACAACAGGAACTTAAGTTCTGTATAGATAAAGAATTGGATTCTGTGATTATTTTTAAATCAAGGCAGGAAAAATGGTTGGATAAGGAATTCTGGGGACGGAAAGATGATGCAACCAGTTTTATTCTGTAATTGTCAACCTACGATACGGAAAAAATCCCGGGAGGTTGACAAAGCCTTTATTTATAAGGAAAATAGAAACTTTATAGAGTGTTATAACATCTATTTTGTATATAAAATAATTGTAAATGACAAGGTTGACAGAAAATGGTAAAATAAACGATGTATTATAGGTGAATGTGGAGCACGG # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATTGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 302430-300029 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUU010000002.1 Blautia massiliensis strain MSK.13.38 NODE_2_length_312034_cov_161.143, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 302429 36 100.0 37 .................................... TTTTTCATATCGGTGTGACGTCCCATCCAAGACGCCC 302356 36 100.0 34 .................................... AAAAATGCAAGATTTAAACAAAGCAACACTGACC 302286 36 100.0 30 .................................... TTTTTACATCTCTCATTGAGCTTATCTACC 302220 36 100.0 37 .................................... GATTTATCTATGACGAAATGAAGAGAATGAAATCCGA 302147 36 100.0 35 .................................... TATTTTCACATCATAACAATAATGTTTTCCGTATT 302076 36 100.0 41 .................................... CATTTTTACGTCCTCCTGATAGGAATTTTAGGTATGAAAAA 301999 36 100.0 33 .................................... ATTTGAAAACTCTTTTTTGAAAGTGTCCATAAT 301930 36 100.0 34 .................................... ACTTAAATGATGGAGTTGTGATTTTAATAGTATT 301860 36 100.0 35 .................................... TATTTGATTTAAATGTTTTCATAACTTATCTTCCT 301789 36 100.0 36 .................................... GTATCATAACAAGAATACTGCAATTCGTAATCGCTT 301717 36 100.0 37 .................................... AGGCAGAAAGCTTTGCTACTTAATACATCAACCGCCC 301644 36 100.0 38 .................................... AGTTTCAATCTCCTGATCTTCCTGTTTTTTCATAATTC 301570 36 100.0 33 .................................... TCGTACTCGTATATCTTTTCATCGATTATCACG 301501 36 97.2 37 ...............................A.... GTGTTATCCTCCTGATTTTATTCAAATTTACAAGTAG 301428 36 100.0 35 .................................... TTAGCCGCTGCTTTCGTAGCAAATTTCGACATTTT 301357 36 100.0 36 .................................... TGCTCAGTGTTTATCAAGTGCAAAAATGGATTTTAA 301285 36 100.0 35 .................................... AATTTAATTCTTGTCTACCGTACAAATCAAAACCA 301214 36 100.0 36 .................................... GATTTATTTGTACGTTAACTAACATGCAAACACATA 301142 36 100.0 34 .................................... ATCTTTTACCGTTTTCATCAGTTGCAACCCAACG 301072 36 100.0 37 .................................... CAACCAGCCATTTTGATTAAATCGTATTTAGCTTTCA 300999 36 100.0 35 .................................... AAGAATCTACTTCAACGACTACAAAAGAAGAACTG 300928 36 100.0 36 .................................... GATTTAATGATAGTATACTGTTTCTTTGCCATAATT 300856 36 100.0 37 .................................... ATTTAGAAAAGTTTTTACAATCGTTATGTATTTCGTT 300783 36 100.0 37 .................................... AGTAAAGCAAGAAAGCTTTACTAAGAACTATATATGT 300710 36 100.0 38 .................................... TCTTCCACGGGCAATTCTGTCAAGATCCATAAATACTG 300636 36 100.0 32 .................................... CCAAAATTATCATTAATGAACGTTTTAATTGC 300568 36 100.0 35 .................................... TTGCTAACGGATTTAACTGTCAATCGCTCGTTCGA 300497 36 97.2 38 ..................T................. GTGTATGTGGGTGGATTTCCTGAGTGATGCCTTGTAAC 300423 36 100.0 36 .................................... AATTACAACCAATAACCAAGGGATTAAGTTCCATTG 300351 36 94.4 32 ..........................A...T..... ACAAGTTATTTCTTATTACATTATTTATTATA 300283 36 100.0 36 .................................... TGCTTCCCTCCATGCTTTCTTGAGACCAGAGGAAAT 300211 36 97.2 38 ....................A............... TATTAATCCAAGTTCCAAAAACAAAGCTATCATCCCAA 300137 36 100.0 37 .................................... CCAAGTTCGATTCTGGCTAACCTTGTACGGTCGATTC 300064 36 94.4 0 ..............................A....T | ========== ====== ====== ====== ==================================== ========================================= ================== 34 36 99.4 36 ATTGAGAAATGTAGTTCCCCGACAGGGGACGGAAAC # Left flank : AATGTAATCTAAAAATTGAGGATATTTTGGATGCAGTAAAATTGTTTTATGAGCAGTATTATCAGATGTTCCAGAGTAAATTTCCGAGATGTGACAGAGGTAAACCTAATACAGTATTTCTTGGTGGTGGAAGTGGTTTTGTTTCAAAAACGGTTGTTTATCCTATGTTTGGCGAAAAAGAAGGTATTGAAATAACAAAAGATATCTTTGACAGAACAGGTGTGCCACAAAATCATAAGCACTATAAAGATACAAGAATGAGGGTTTCACCACATATCTTGAAATGTACCCGCTATCAGGGAAAAGAATATATGATGGGACAATGTGAAATTGATATTTCTTAATAAAAGAGAATATCTGTTTGGATTTTGCCGCGCATGGCTTAAATACTGAGTTTGCTGCCGATTTAAGCAAATGCATTTTATTTATTTTTCCAAAAATATTTTTCCCACGCAATCCCGACCATGAGCCCAGACTGGTGGCGGGATTGCAGGGATGGT # Right flank : ATCTATCCATTTATTCGAGCACAGAACAATAAACTTTATTGATAACATGTAATATACGGAGGTGGAAAATGGGATTTTTGTATGTGAATGAAAATGGAGCGACTATCGGAGTTGAAGCAAATCAGTGTACTGTGAATTATAAGGACGGTATGAAACGTCTTATTCCAATTGAATCTTTAGATGGAATTACAATCATGGGGCGTTCACAAATGACAACTCAGTGTGCGGAAGAATGTATGAGCAGAGGGATTCCGGTAAGCTATTTTTCGAAGGGCGGGAAATATTTTGGCCGGTTGATTTCAACAGGACATGTTAATGTGTCAAGACAGAGAAAACAAAGTGCTCTTTATGATACAGAATTTGCTGCAACACTTGCTATGAAGATTCTTTGTGCAAAGATTAAAAATCAAAGTGTAGTATTACGTCGATATGAAAAAAGCAGAGGGATTAACCTGGAAGAAGAGCAAAAAATGCTGACAATCTGTAAAAATAAGATCATG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGAAATGTAGTTCCCCGACAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //