Array 1 65834-65378 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG313817.1 Lactobacillus acidophilus DSM 9126, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 65833 29 100.0 32 ............................. ATATACATAGTTGTTTGTTTCAAAAATTGCCG 65772 29 96.6 32 ............................C GGAATGTATGATAAAAATTGGCTATTTGCCTA 65711 29 100.0 32 ............................. ATTGATGCAACACCTAGCGCAAGTCAACCTGG 65650 29 96.6 32 ............................C AGGGTGGTTTTAAGTACGAGATTGACTACGAT 65589 29 100.0 32 ............................. GGCGAGAAGCTTATGAAGATCCTAGGAAAAGG 65528 29 100.0 32 ............................. ATATGCGACTTATTTCTTACGATGAGATTCCA 65467 29 93.1 32 ............A.A.............. CGATGGTAACTCTGTAGCTTTTAGAGCCTTTT 65406 29 75.9 0 .....T..T.T.A.A........A.C... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 95.3 32 ATTTTCTCCACGTATGTGGAGGTGATCCT # Left flank : CAAAAATTGCCGATTTTCTCCACGTATGTGGAGGTGATCCCTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAATTTTCTCCACGTATGTGGAGGTGATCCCGGGTAAACAAGTCAGAGTTACTCGCAGCAAATATTTTCTCCACGTATGTGGAGGTGATCCTTAGGCGAAACCCCGAGAGCAATTTCAAGCACGATTTTCTCCACGTATGTGGAGGTGATCCTAAAACGTTGAAGCTTATTGTCCGCTTTAACGTATTTTCTCCACGTATGTGGAGGTGATCCTGTTTACAACATCATGGTTAGAGCAAAACTTGTATTTTCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTACCGAGGGTGGCAATATCTTCCTTATTT # Right flank : GAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAATG # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : ATTTTCTCCACGTATGTGGAGGTGATCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 66050-67419 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG313817.1 Lactobacillus acidophilus DSM 9126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 66050 27 100.0 34 ........................... TACGTTAAAGCGGACAATAAGCTTCAACGTTTTA 66111 27 100.0 34 ........................... TCGTGCTTGAAATTGCTCTCGGGGTTTCGCCTAA 66172 27 100.0 34 ........................... TATTTGCTGCGAGTAACTCTGACTTGTTTACCCG 66233 27 100.0 34 ........................... TTTTAGCTAAGTTTAAGACCGAAGATGGCCAAAG 66294 27 100.0 34 ........................... TCGGCAATTTTTGAAACAAACAACTATGTATATA 66355 27 100.0 34 ........................... TCGGCAATTTTTGAAACAAACAACTATGTATATA 66416 27 100.0 34 ........................... TACAAGTTTTGCTCTAACCATGATGTTGTAAACA 66477 27 100.0 35 ........................... TAGCTATCCAAATATTAAATTTGCACTAGTTAAGG 66539 27 100.0 34 ........................... TGAAGAATTTTATCTTCTAGGTGGCTTTTTTGTG 66600 27 100.0 34 ........................... TAGAAATATTTGATTTTGATAGTGAAAAAGAATA 66661 27 100.0 34 ........................... TTCAAGATCAACCATTCATTTGCCACGCAAATCG 66722 27 100.0 34 ........................... TTATTTTCTGGTGTGAAAAATGCTGATGATATTG 66783 27 100.0 34 ........................... CCCAAGATATAATTAAAAGAAAATATCGTAGTCA 66844 27 100.0 34 ........................... CTTTGATTTGAGTTAAGTACCGGTGCATCAATGA 66905 27 100.0 34 ........................... CTCTTTAATGTGACCAAAAGCGCTCGTAGCAGCA 66966 27 100.0 34 ........................... CGGACGCAAAAGGGCAGAAAGCTAATTTATGACG 67027 27 100.0 34 ........................... CTTGCTATGTCCGCTCTTGCTTGCATTGCAGTCA 67088 27 96.3 34 ............T.............. CCCACGCCACATATTGTGTGCGGAATAGCCTAAG 67149 27 100.0 34 ........................... CTCTGCCAAAATAGTAGCCGAATCTGGAAAATCA 67210 27 100.0 34 ........................... CAAAGTGTCACAAAACTAGCACCTTTCATTAAAA 67271 27 100.0 34 ........................... CAGAGTTTAGTCGTCGCAATGTGTGTCTCAATGA 67332 27 100.0 34 ........................... CATAAAAATAAGAGGAAACCACCGTTTTCTCTTA 67393 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== =================================== ================== 23 27 99.8 34 GGATCACCTCCACATACGTGGAGAAAA # Left flank : AGCTTCTCGCCAGGATCACCTCCACATACGTGGAGAAAATATCGTAGTCAATCTCGTACTTAAAACCACCCTGGGATCACCTCCACATACGTGGAGAAAATCCAGGTTGACTTGCGCTAGGTGTTGCATCAATAGGATCACCTCCACATACGTGGAGAAAATTAGGCAAATAGCCAATTTTTATCATACATTCCGGGATCACCTCCACATACGTGGAGAAAATCGGCAATTTTTGAAACAAACAACTATGTATATAGGATCACCTCCACATACGTGGAGAAAATAAATAAGGAAGATATTGCCACCCTCGGTACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGAAAATACAAGTTTTGCTCTAACCATGATGTTGTAAACA # Right flank : ACACTAAAGGAATCCCATCGTTAAGCTATTTTAAATTTACTAAAAAGCAAAATTTCTTTAGTTTGCATTTCCCCAACCAAATCATCGACACAATTATATCAAATATTCTTCTACATATATCTAGCTCATATAATAATTTTAAATTGCTATTATATTCACAGGATTACAAATAAACAAAATATGGGTAGCCTTATCAATGTCATTAAGTTAAGACATTATATAATATTAAAATCTCCCAAAGCACGATTACCAATATCATGCCGGTAGAAGCAATCCAGCAGATCAAGCTTACTTAAATAAGAATAAACATTGTCTTGTGCCTGAACTAAATTGTCAGCTTCCGAAATCACCATGAACAAGCGGCCACCATCACCCGTCAAGTTTTCCAAATCACCTTTAACATTGGCGTAATCGATATAGGTATTAGCACCTTCAGGCAGCTTGCCGATCTTAACATTAGGTGCTGGGTGCGTTGGATAGCCTTTGCTGCAGACAACCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCTCCACATACGTGGAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //