Array 1 77606-73158 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPUO01000006.1 Eggerthella lenta strain 22C NODE_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 77605 33 100.0 35 ................................. GCAAGTACACGTGCAGAGCCGAGATAGCGCGCCAG 77537 33 100.0 35 ................................. CGGAAAGTCGGATTCGAGCGGAACCTACGACAACA 77469 33 100.0 33 ................................. CCCCAGAACATGCAGGTTACGTCGTAATCACGC 77403 33 100.0 34 ................................. TGGGCTAAAACGTTCGATTTCAACGCGCAACTTG 77336 33 100.0 33 ................................. AAGCAAGGCATATGGCAACTATTTGAATGGCAC 77270 33 100.0 33 ................................. CTGCGCCCGAAGACCTATATCGAGGACGAGGGC 77204 33 100.0 33 ................................. CCTATTGTGGCTTGCGTGGGCATGTTTTACCTG 77138 33 100.0 33 ................................. ATCTACGGCATTCGAGGTGCTGGCAAGACCTAC 77072 33 100.0 34 ................................. AGGACGGTTGACCCGTCGAACACGAGGGCGCTAA 77005 33 100.0 34 ................................. CTGAACGACTACGGGCTGCAAGACCTCGTGGGGC 76938 33 100.0 33 ................................. CCCTTTATTACAGGTACATAAACACCGACCGCG 76872 33 100.0 33 ................................. TACTCCGAAACGGAGTACATCCATGACACGGAG 76806 33 100.0 33 ................................. CGACACCTGCGCCTGAGTGTTTCCGATGGTAAG 76740 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 76674 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 76608 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 76542 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 76476 33 100.0 34 ................................. TCCAGTATACAGAGCGTTGCGCAAGTTGTCCTGG 76409 33 100.0 33 ................................. CCGTGCTGCGCCCGCCCAATTCCATGAAAAGGC 76343 33 100.0 34 ................................. CAAAACCGAGAGGATGCTCATATCCGACGGCCGC 76276 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 76210 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 76143 33 100.0 35 ................................. TCATATTCATAGATGTTCTCTGGCAGTCCAGGGAG 76075 33 100.0 33 ................................. CACATAGTCACGCCATAATCATCGCGCGAGAGC 76009 33 100.0 33 ................................. TACTTAGTGTGTTATATGCGCCGCAAATACTAT 75943 33 100.0 34 ................................. GGATACGCTCTCATGCATGCATACCCTGTGGCCG 75876 33 100.0 35 ................................. TTGTTGTCGCCGTTCCTCGCGGCAGCCACCTCGGC 75808 33 100.0 33 ................................. CGATGCCGACCACGACGATAGCGCCCATGATGG 75742 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 75677 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 75610 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 75540 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 75474 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 75408 33 100.0 32 ................................. GAGTTCGTTACCGACACGATCGGCCTCATCGG 75343 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 75276 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 75209 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 75141 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 75074 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 75007 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 74940 33 100.0 36 ................................. ACGTATACGGGCTTCGCGCCGGTGCCGTTGACGTCC 74871 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 74805 33 100.0 33 ................................. GATCCGCTACGACAACGTAGGGGATCAGGCCGA 74739 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 74670 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 74603 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 74537 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 74469 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 74402 33 100.0 34 ................................. AGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCC 74335 33 100.0 34 ................................. ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 74268 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 74202 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 74137 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 74070 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 74000 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 73934 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 73868 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 73802 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 73732 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 73663 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 73597 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 73531 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 73460 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 73394 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 73327 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 73258 32 93.9 34 .................-..............C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 73192 33 75.8 0 .....GTT.A..T.....C.C..........G. | C,T [73176,73188] ========== ====== ====== ====== ================================= ====================================== ================== 67 33 99.3 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : CGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //