Array 1 77503-80158 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCIE010000016.1 Bacteroides caccae strain DFI.3.37 PBEHJPJO_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 77503 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 77580 47 97.9 30 ..............C................................ ATAACAAGAACGGGGAAAGTGATAAGGCCG 77657 47 100.0 29 ............................................... TGGCAGATGGTAATGACGGCACGGACGGT 77733 47 100.0 30 ............................................... AATTCCAAATATTTCGAACTATGGAAGAAG 77810 47 100.0 30 ............................................... ACGATAAGTCATGCCATTCCGATAACGAGT 77887 47 100.0 30 ............................................... TCACCAAATTGTGTATCCGGAAGAACGCCC 77964 47 100.0 30 ............................................... TATTACACTACAAAGATAAGGGAATATAAG 78041 47 100.0 30 ............................................... TGAAGAAGCAGAAGAAGAAGCAGCACCAGC 78118 47 100.0 30 ............................................... GAGTGAATTCACAAGATTTGCCATTACGGA 78195 47 100.0 30 ............................................... GCAGCACCAGCAGCAGTTGCAGCAGAAGTA 78272 47 100.0 29 ............................................... GCCAGCTTGAGAACCAAGAACATCCTTGT 78348 47 100.0 30 ............................................... CGAAACCGATGATATTCGTGAGCTTATTAC 78425 47 100.0 30 ............................................... CAGTGCATCAAGGCAAAATTAGAATATGAT 78502 47 100.0 30 ............................................... GCGCTGCTGCTGTTGAATTCCGAAAGAATT 78579 47 100.0 30 ............................................... GTATATCGGCCATTTTTGAAACTCTGACGG 78656 47 100.0 29 ............................................... TGCAGCTTAGTATCAAAAGAAGATTGCTT 78732 47 100.0 30 ............................................... AACTGGATTAACACAGAATGGATTGACGGA 78809 47 100.0 30 ............................................... ACAGCCGTTTTTCCTTCCAATGACGGAGCC 78886 47 100.0 30 ............................................... ATATCAGTCTGTTTCTTCTCGCTCATCATT 78963 47 100.0 29 ............................................... GTAATAGGGATTGTTACGATTATCACGAT 79039 47 100.0 30 ............................................... AATGATAGCTGCAACCGTAGTAATACAGGT 79116 47 100.0 29 ............................................... AATAATGAGTTTAATGCTGCCGAGGCTGA 79192 47 100.0 29 ............................................... GACATATTCGCATTATTGGCTTTATTTGT 79268 47 100.0 30 ............................................... CCAATCTTTGAGAGTAGTGGTAAATGCACC 79345 47 100.0 29 ............................................... GGCTTCTGCGTTGAAAATGATGTCGGAAA 79421 47 100.0 30 ............................................... TATTGCGCAATTTTAATAAGAGCATCAGCA 79498 47 100.0 30 ............................................... CAAAAATTATTAATTTCACGCGCGTGTTAC 79575 47 100.0 29 ............................................... TTTTACAATGCCTGGTGATAAATTTACCT 79651 47 100.0 30 ............................................... ATGTCCGAGGACCATATTCTGATACAGCGT 79728 47 100.0 30 ............................................... ATAGACAAGTACAAAGGTTGGCTAGAGAGC 79805 47 100.0 30 ............................................... TTCATGTTTATGTATGAAGATAGGCACCGG 79882 47 100.0 30 ............................................... TTCATAATCAAAAATTTTTATGAAGTTTAA 79959 47 100.0 30 ............................................... TTATGATTCATTAATTAAAGACGCTGAAGA 80036 47 100.0 29 ............................................... ATTCTGAATAAGTATCTTGACCAACAGCA 80112 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 35 47 99.2 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : CTTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATACAAAAAATGTATGAATTGAATAATTTGAACTATAGAACAACATATTATGGTATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : CACAATCGCCATTAGCCGCTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //