Array 1 123210-121046 **** Predicted by CRISPRDetect 2.4 *** >NZ_NESA01000006.1 Limnohabitans sp. JirII-31 LimA-JirII-31-C6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123209 29 100.0 32 ............................. GGATATAGGCAGACTCTGCATTGTCTGCAAAG 123148 29 100.0 32 ............................. GTCGTGATTACCGAAGACGATGCAGGAAATAA 123087 29 100.0 32 ............................. GCGCCCTTATGGTGCAGGCCCGCACCATGGAG 123026 29 100.0 32 ............................. GTAGACCGTGCGCTCATTCGCCCATACCTGGG 122965 29 100.0 32 ............................. TCCTTGAGGGGAAACCCCTAGCATTCACGAGA 122904 29 100.0 32 ............................. CTTTGCGGGCATGCCAACCACCACCCGAGATT 122843 29 100.0 32 ............................. TTCACCGACATCACCTACGAGGTGGTGGCCCC 122782 29 100.0 32 ............................. TGGCAGTCAGCCTTTTGCGCTACCGCGATATG 122721 29 100.0 32 ............................. TGCCGCCACGCCTGAATATCGGTCTGCGCACT 122660 29 100.0 32 ............................. CCAAACTAACACCGCACAGTGGCCCACACGCT 122599 29 100.0 32 ............................. ACGGCGCGTCCTGATTGATCGATTGACCTGAT 122538 29 100.0 32 ............................. CACTGATTTGTAAATGCTCAACGTGTTATCAG 122477 29 96.6 32 ............................G TCGGCACACCTCGCTTGAGCGGTACCGCTCAC 122416 29 100.0 32 ............................. CTCTGGCAAGAGGCCGAGGCTGGCACCAGCGA 122355 29 100.0 32 ............................. GTGTTCACTGTCAGCGGGGGTGGCAATTGACA 122294 29 100.0 32 ............................. CTACACTGTGGATACCAGCCAGACAGTGGCGT 122233 29 100.0 32 ............................. TGATGTTTATGACGTTGATATGCCTGATAAGG 122172 29 100.0 32 ............................. TATGACTTTGCGGCGCAAGGTCAATTTGGAGC 122111 29 100.0 32 ............................. GGCACCGTGTCGCTTTTCCCGGTGGACGTGGT 122050 29 100.0 32 ............................. ACGGCTTGGGCGTCGTACACCGTCAAAGCCAA 121989 29 100.0 32 ............................. AGACGAGCCGCTAGAAAAGCCGAGACGAGACC 121928 29 100.0 32 ............................. AGCCGTGAGCCTCGGCATGATGGCAATGGGAA 121867 29 100.0 32 ............................. TACTTGTTTGCGACGAACAACGCAACTACCCT 121806 29 100.0 32 ............................. TTGAGAAAGCGATTGACAGACATGCCCGGCGC 121745 29 96.6 32 ............................G CGGGCGAAGGCCTAGCTTCAGCATGAAGGTAG 121684 29 100.0 32 ............................. TTTCGGTCATGCGCTGAAATGACTGCGCGACA 121623 29 100.0 32 ............................. GAGCTGCTGGACCCGCTGATCGACATGACGTT 121562 29 100.0 32 ............................. CATGTGGCGGGATGTTGCAAACTTGCGCGTCA 121501 29 100.0 32 ............................. CTTGAATTAGTTCGAGCTGAATTGATCAAAGC 121440 29 100.0 32 ............................. TTGATGGCGTCTAAGTCGCGGCTCCTCAAATA 121379 29 100.0 32 ............................. GGGTAAAGCGTTTTGCGAGAAAAGAGGATGGC 121318 29 100.0 32 ............................. CAGATGTCTGGCCAGCGCGCGACGAGAGGCAC 121257 29 100.0 32 ............................. TTCAAAGGTGAAGGCGGCGTGGACGGCATTGT 121196 29 100.0 32 ............................. GTCCAGCCCTCCACCGTATAGCGTATGCCTAG 121135 29 100.0 32 ............................. TACACCAACGCGATCAAAACACAAGACATGGT 121074 29 86.2 0 A........A..............A..A. | ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.4 32 GGTTCCCCCGCGCACGCGGGGATAGGCCC # Left flank : AAAGCGAGAAATCTGGCGAACTGATGGATCGAGTGGTTCGGCGTGAAGCAGCGCGGGTCTTTCGCAAGGAGTCGGTCATTCCATCAATGATTGATCGGATCAAACAAGTACTACGCATGGACGAGGTAGCTCATGGCTCTGGTAACGATAGTGACTCGTGATGTGACAGATCGCTTTCGTGGGTTTTTGGCGTCTGTGATGTTAGAGGTGGCTCCCTGCACTTATGTCAGTCCGCGCATGAGCAAAGGTGTGCGAGAACGAGTGTGGAGTGTGATGACTCAGTGGCATGGTGTTGAGCCACGGGGGAGCATTGTCATGATCTGGCGAGAAAGAGAAGCCACTGGTGGTGTGGGGCTTGCTCATTTAGGGACGCCAGTCAAAACATTGTTTGAATTGGATGGCATGTGGATTGCCCGTGCTGGGGTTTAGGCCCAACTGCTCTTTAAAAACTGAATCGAAATAGTGAAATTTATTTCTGGATCAATGACTTGCGATCTAGA # Right flank : GCTGACATCGCGCGCTGATATTTATAAGAGGTCGATTCAGAGTTGTTAGAAGCGGATCAGACACTTGATGGTTCAAGATAGAGCCTTTGTGGTGATGACCACCAAGTAGCGCTGCATCAATTAAAAACCCCCGCAAGCGTTGGCCGCTTACGGGGGTTATGTGGGGTCCCAACGCATGGTTGGGAGGCTCAGGCTTAGATGGTGTCGATGAAGCTGCGCAGTTTGTCGCTGCGGCTGGGGTGCTTGAGTTTGCGCAAAGCCTTGGCTTCGATTTGACGGATGCGTTCGCGCGTGACGTCAAACTGCTTGCCCACTTCTTCCAGCGTGTGGTCGCTGGTCATCTCGATGCCGAAACGCATGCGCAGCACTTTGGCTTCGCGTGGGGTGAGGCCGTCCAAGATGTCTTTGACCACATCGCGCAAGCCCGCTTGCATGGCGGCTTCGATGGGGGCGGTGTTGACGCTGTCTTCGATGAAGTCGCCCAAGTGGCTGTCGTCATC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGCACGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //