Array 1 1074627-1074777 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDUA01000001.1 Levilactobacillus brevis strain DPC 6108 DPC6108_contig_0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1074627 29 100.0 32 ............................. CTTATCAACTGAACCAACTGATACACTAGTGC 1074688 29 96.6 32 ............................T ATTTCGAAGTGAGAAGTTTGAGCTTTCCAATG 1074749 29 89.7 0 .........................A.GG | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 GTATTCCCCACATGTGTGGGGGTGATCCC # Left flank : TGGAACCATATGATGATTTCAATGTGATGGGAGCGGCATTTTGCAAAGCCCATCCGGAGCAGGTCACCCAACAGCCGCTAGGTCAGCACCATCAGGCCAGGGCGATAGGGATGCGGGCGCTGGTCGACTTTGCGCGCGAGTATTATCGAAAAAAAGATCGACGCGAGATGAGCTAAAAAGTACAAGATATAAAAGCGTAGTTGTTAGCCGCGGTGAACGGAGTAGCGGCTACGTTTTATTGTATTATATAGTCTTCTATCCTTTGATTGTATCAAAAGGTAGTCACGATACTTTGGAACAGGCTAGTGATTTGGCGGCCTGGCTACGTAGATTAAGCAACTGGATCGTTACTAGCAATCTAAGTCGAAATTACTTACAAAAGTAAGGCCACAAATTCCGATTGTTAATCAAATATGAGTAGGGTATGCTTTAATAGTCAAAGTGATAAAATTTGCTGTTTTCTCTAAATGAAAATGCTGGTATATCAAGGATTATTTAGT # Right flank : GAGGCGTTTCAAAAATGATTGTAATGCTGCGCTTAAATCAAAATAGACTTTTTATGGAAAGATAATTGATAGAACAGATCACCCAACAGGCGCTGGATCGGTACCAGTAGGCCATGGTGATAGGATGCAGGTGTTGGGCGACTCTGTACGAGGACATTATCGAAAAAAATCGGCGTGAGATGAACTTATCGAGGAGTCTATCGGGTATTCAGGCACGGGGATCGTATGTATAAATGAGGCTAGCTGTTAAGAAATAAAGTGCTGGTGGTTGACAAAGTTAATGGCTCGCGTTATATTAATAATCGAACGATCGATCTTTTAAAAGGAGCCAATCATGCGAGAAAAAGATACGGCAAAACAAACGAGTATTATTGATGAGGTCAGTAATATTATTTTAAACGAGGGAATTGCAGCAGTCTCAATGTCCAAGATTGCTAAAGCAAGTGGCATTTCTTCATCAACGATTTACGTGTACTTTACGGATAAGGAAGATGTGTTAA # Questionable array : NO Score: 3.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACATGTGTGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2131969-2132302 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDUA01000001.1 Levilactobacillus brevis strain DPC 6108 DPC6108_contig_0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2131969 29 100.0 32 ............................. GATAATCAAGTTTACGTGAGAGTTAAGGGTGC 2132030 29 100.0 32 ............................. CATCATATCCCACCCTCATATCCATTAATGGG 2132091 29 96.6 32 ............................C GTTCTCCGCTAATCTAGCCGTCTATGATACTA 2132152 29 100.0 32 ............................. TAATGGATAAAGTCAAAGCTGCTGAAAGCGAG 2132213 29 93.1 32 ..........................T.C GGCCAATGATGTTGAATTGCGCTCGGGTGTTA 2132274 29 69.0 0 ..T........AT.....T...CAC.A.C | ========== ====== ====== ====== ============================= ================================ ================== 6 29 93.1 32 GTATTCCCCACGGGTGTGGGGGTGATCCT # Left flank : CGTACCCGGCCGTGTTCCATGATAATGAAGCTGGTGGGTATATCGTAACTTTCCCCGATATTGAAGAAGCTATGACCAGCGGCCAAACCCTAGGCGAGAGCCTGGTCAACGCGACAACCGTTCTCGGTCAGACGCTCCATCATCATCCGATGGTACTGCCAACAGCGACGACCATCACTGAGTTGATGCATCAATACCCCATGGCATTCATTCAGTTTGTCGCGGTAGATTTAGACCAAGTCATCGAACACGCAGTACCAACTGATCAAGCAGACCTACAATTGACTTAGTCATTGATGAAATAAAGCATAAAAAGCCGGTCCCGGTTAAAGGGATCGGCTTTTTATTATGTATGAGAGTGAGTTGTCGGATAACGAACCGGATTGCTGTCGCTACGATTCTGCGGTATGCTATAAAATATAGATGAGTCTCATGACGAAACTCATAAAAAACGCCGGTTTTTAAATTTTAAAATTCCGGTGTGGCGGCGTTTCTTTAGT # Right flank : CAGTAGTTGTTCTCTTCTAATTGCCGAATATAATAAAATAACAGCGTACCTCAATCATGGGTACGCTGTTATTTTTAGTTTACTCAGCAAGACGAATGCGAATATCGCCAATCTTTTGTTTTAGATGGTTAATGGATCGGGTTAGTGTTGTGCGTTGTTCTTCCGATGCGCTTAACTGGGCTTGGAGAATGGCCAAGCGTTCCCGCAGCGTACTATCACCTTGTTCGTAGGTAGCGATGAACTGCTTCATTTGCTTGATCGTCATTCCACATTGTTTGACGCAGAGAATGAAGTCCATTCTTTCCAAATCAGTAGTGTTGAAGTCCCGGATACCGTTGATGCGGTTAATGGGGCCGATAAGTCCCTGTTGTTCGTAGTAACGAATGGCCGATGTTGAGATGTGGTAACGCTGAGCCACAGTTTCGATTTTCAAAAATGATCACCTTCTTGACTTAAAGTATACTTTAAGTAGTAAGGTTTTCAACAACGGGTAAATCAGC # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.60,-10.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //