Array 1 27292-29029 **** Predicted by CRISPRDetect 2.4 *** >NC_017317.1 Corynebacterium ulcerans 809, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 27292 29 96.6 32 ..............A.............. TTGAGAACCCCCCGCAGTTTAAAGCTTTTCGA 27353 29 96.6 32 ..............A.............. AATGACTAAGCGGGCGTTAAGTGAACTTGAGG 27414 29 100.0 32 ............................. TGACCGAGCTTGCCTATTTCTCGATCTCACAC 27475 29 100.0 32 ............................. CTTCCGGCGCTAACAACAACAAATTCATGACC 27536 29 100.0 32 ............................. GGCTAATGCGACGAACTCTCACCCGGCTCATG 27597 29 100.0 32 ............................. CAATGCAGCGAGCGGAGTCCACCGATAACGAT 27658 29 100.0 32 ............................. GTGAAGTGCTCGATGGATCTGGACATGGCGTA 27719 29 100.0 32 ............................. AATTGGGTTAGCCATTCGGAAAAGTTCATGCC 27780 29 100.0 32 ............................. CACGAATCTCAAGCTCAGGCCACACCGGTTCC 27841 29 100.0 32 ............................. GCTCTAGAGAGCTCTCTTCGTCGCCTTTATGG 27902 29 100.0 32 ............................. CGCACAAGGAATCAACGGTGCAAACGCTCGTG 27963 29 100.0 32 ............................. GGCTTTTCCTGTTGTGGGATTTCTTCCACGAG 28024 29 100.0 32 ............................. ACCCTATGACACGACACGCACAACACCCACAG 28085 29 100.0 32 ............................. TTCGGATGAATGAGCGCACCAAAAACTCTTCG 28146 29 100.0 32 ............................. AGAGTGCGAAATGATCCAGGAGCCTGCGATAA 28207 29 100.0 32 ............................. GCTCCGGGTCAGCTACCAGATTTCCCGCCATC 28268 29 100.0 32 ............................. CCGGCGTTGATAGCCGGGCTTTAACACCCCAC 28329 29 100.0 32 ............................. CCTTTTGGTGTTACGTCTGTTCGATAAGACAC 28390 29 100.0 32 ............................. CCCCTGTGGTCTCCCACTTTTTCACGACTTCA 28451 29 100.0 32 ............................. GTCGGGCTATCGGATCACTAGTAGCGGTATAG 28512 29 100.0 32 ............................. AAGCCGCAGCGCACTACCACACCGGTGGTGTG 28573 29 100.0 32 ............................. TCGCAAGATTCAACGCTTGTGTCGGCAACCTC 28634 29 100.0 33 ............................. GAACTTTTCGCTTTCATCTCGCACATGATCCGG 28696 29 100.0 32 ............................. CTGTCGCCAGCGTGATTCTGAGATCCCTGCGC 28757 29 100.0 32 ............................. TCGCTTGACCACCGCGTGGGTGTGACCAGCTG 28818 29 100.0 32 ............................. TTGACGCTATAGTCGGGGTGCCACGTGTTTTT 28879 29 100.0 32 ............................. CCTGCGTTTACCTTGAGTGTGTAGAACTTTCC 28940 29 100.0 32 ............................. ACTAGCAATCTAGGGTATACCCTTTTTAGACA 29001 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.8 32 GGAACTACCTCCGCGTACGCGGAGAAAAG # Left flank : ATTCGCTTTCACTTTTGAATTTTCAAATAACCTGCACTCCCCCAATATGCGAGGGGGTGCGTAGTGCCCGGCGTGGGAATCGAACCCACGGGAAACCATTCGGGCTTTTAATTTTTAAAAGATCGTGTATGGTAAGAATTGGTTTTGGCTAAGGCTCCGGTTGTGGTGACTGGGGCCTTTTCTTTTGCCCATTTCCCGCCAGTTGTTAAAGAAGCTCGTCCGCGGATTTCACAACACCATGATTGACCAGCGTTTTTATCGCCGCAAAAACTTCGTTGATCTTGGTAGTCTTCACGGTGGTGTTATCACCTTCAGGCCACACCAGAGGGGCACTACGCTGCACAATCGCCTTATACCCAAAGGATTCAAGAAGATCAGCGCGGGCCTTAGCCCCAGAGCGTGATTGATAAAGCTTCGTAGTGGAAGGCTCAATAAAAACATTAGTATTGAACCGATCAATATAATCCTGCATCGGTATCCAGCCTTTAGGGACTACGCTT # Right flank : GGCTAAATAACCTGCGCGTTTACTCACTCTCTGGGCAAAAATCCTCCAAAACTTCGTCTGGAATAATTGCATCGGCTTCATCCAGGGGGTCAGCAAAACGCACGTCTTCTATTAGACCACGAGCAGAGAGGAAAAGGCCATCAAGATCAACGACGGGGCGCCGTTGTTTTCCTGTTGTGCGGATTCTGAACCCTTGCTCAGCATCATATTGTGGGTGAATCAGAGTAAGAGATCCTGCTAGGTCTACGGATTGGCATTTTTCCCAAAGGTTTTCCATGACGGCTCTGGATAGAACTCCTACATAAAGACCTGCGTCTACTTCGGAAAGGAAGCGACTGAGGTAGCCGTTGAGGTGGTTCGGAAGGTTATGTCCTTGGATGACCGCAAACATTTATTTACCACCATATTGTGTGTGCCCTGGGACTTCGTGGTTTCTTCCGCCGATGAGGCGGTCGTCGGTACGCTCGGGGAGATGTGGAGTGAGGATCTCCATCATAATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCGTACGCGGAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 112599-111684 **** Predicted by CRISPRDetect 2.4 *** >NC_017317.1 Corynebacterium ulcerans 809, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 112598 36 100.0 39 .................................... TTTCCCCGCAGAAGACACAGAACTCGCCTACGACCCTGA 112523 36 100.0 37 .................................... GACCACCAAAATCATCATCCCCGTCATTGTTGATGGA 112450 36 100.0 39 .................................... CCCCATGGCTATTCCTTTAGCGATGGCGTCCATGTAAAA 112375 36 100.0 38 .................................... TTTGAGGATTTATGGCAGAAGCCAATCCACCGATACCC 112301 36 100.0 38 .................................... CCCGAATAGGGCCAAGGAACCGCGCATCAATCCCATCA 112227 36 100.0 39 .................................... GGCTACCATAAGAATATACGCCAATGACGGAACACCAGC 112152 36 100.0 39 .................................... CTTCAACCGTGCCATGGGCCCCACCGGATGGACCCGGAA 112077 36 100.0 35 .................................... CCTTGAGCTTCGCAATCGCAGCATCCACAATACGG 112006 36 100.0 33 .................................... GTCGAAGTCCGCACCAATCGCGCGCTTAATCAA 111937 36 100.0 38 .................................... ATATTTGCGCGGCGTGCAGCAGCACGAATCTTCGCTAG 111863 36 100.0 37 .................................... ATGGAAGAGATCGCTAGCGGTTCGGCTTATGAGGGCA 111790 36 100.0 35 .................................... CCGGCGTTGGGGTTCTCACTGATGAGCATGGAGGC 111719 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 13 36 100.0 37 GTCGCTGCGGCTTCGGTCGCAGCCTTTCATTGAGGT # Left flank : AAATACGATGAGGCGGGATGATGTTCGTCGTACGATTATCGCCTACGATATTGCCCACGATAGACGTCGAAATAAGCTAGCGAAGATCTTGCAAAAATATGGCGACAGGATCCAATACAGCGTTTTTGTTGTCGATTGCAGCCCTGCAAAGCTGCTTCGGCTAAAGGATGAAATAAAACTCATTATTAGCGCTGAGGAAGATTCCGTTTTATATTGCGACCTTGGCCTGCTATCGAAAGTAGACACCACGTTTACTTACGAAGGCAGAAAACAAGAGATCACTGACAATGAATTTCTGATTATCTAGCCGCAAGAAACTACCGCGAAGACCCTGCGGACTTTAAAAATCCCGGGAGGTCTTCGCGGTCACGTTTTCCCTTGTCATTATGGTTTTCATAGAGCAACAACAATCACCCTTTTGGAAAATAACTTCATAAAAGTCGAGAACTTCGCAATAAAAGGGCAAATACCGAGGTTAAGTCAGTTAAAATGAGGGGGCT # Right flank : GACGCTGTAGGGCTGCGCGGTCCTCATCGGACGCGCTGGTGCTCGAGATCTGCGCAATGGCGCGGGCTGTTGCTAAGCTCATAGCCGTGCTTTCTCCCCAGATGGTACTGAGTGATAAGCGAGCGTCAGGTAGTTGGAGCTGCCTGGCGCTCATTCATTTTTCAAATGTCACCACACACCCCTACGGAGCATGTACGCACTTCGGATACACGACTCACATTTGCGCTGTTCAACGCCACAGAACGATATCCAGTCCATCGTCTAGGGCCAGCAGCTAGTACTGCTTTATTTCCGTAGACTGCCCAATATGAAAGAGAAAAAACTATCGTCCTTAGTATTCGGAAACGTTATCCTTGAATCTCAGATTTTGGGGACAACCATCCGAATATACGCTGATGACATGCGGTCTTATTCTTTTCGACCTAGCCCTTATGCCTCCCTCTCCGTCCCCTTAAACGAGTTAAAAGGGCAGCTTCAGCCTGACCACGCCGAAGCTCTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCGGCTTCGGTCGCAGCCTTTCATTGAGGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 3 1954889-1959007 **** Predicted by CRISPRDetect 2.4 *** >NC_017317.1 Corynebacterium ulcerans 809, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1954889 29 100.0 32 ............................. GAAAGGCGAAACCGCCTTCTCCAAGGGTGAGA 1954950 29 100.0 32 ............................. CGCGTTGAGAAGGTCGGAGACTTTGCTGCGGA 1955011 29 100.0 32 ............................. TTCCATACAGGTGTTGCAACGGCGTTGGCCTT 1955072 29 100.0 32 ............................. AATGGCTTAAAGAATGTGAACGGGGTATTACG 1955133 29 100.0 32 ............................. GGTTTCAGGCGCGTTTGAACTTTGGGCACGGC 1955194 29 96.6 32 ............................T GGAGTTATTGAGGTGCATCATGAATGGAACTC 1955255 29 100.0 32 ............................. ACCCTCGCCGACCGAAAAGGATTCGACCGCTG 1955316 29 100.0 32 ............................. CCCACACTCGCTAAGGACCCCTGTGACCGCAT 1955377 29 100.0 32 ............................. GCCAAGAGTGCAAGTGGATGCAATGTCAAACA 1955438 29 100.0 32 ............................. ATGCTTATCACCTTCAAGGTCTGTGAGGCGAT 1955499 29 100.0 33 ............................. TGTGCACGACACCGTTGCCCGATGTGACTTCCA 1955561 29 100.0 32 ............................. TCTTAGGGATACGGACGAGCACATCATCTCGG 1955622 29 100.0 32 ............................. TAAGAGATTTGGTTGCTTACTGTGAATCAAAA 1955683 29 100.0 32 ............................. GCGAGCTTTTACCTGCTCGAGTATAGCTTCTG 1955744 29 100.0 32 ............................. CTGGCTGTGATTCCCGAGGGCGGCGCGGTCTT 1955805 29 100.0 32 ............................. TCGGCCCGCACGGCGGCTATCGCAGCCGCATT 1955866 29 100.0 32 ............................. GTGTTCTTTCTTTGATGGCTCAGACACAGTTC 1955927 29 100.0 32 ............................. ATCCACGGCCTTGATCGAAACATCCGCACGAA 1955988 29 100.0 32 ............................. CCACCAGAACCCCGCGCACTACCCGGCAAAAC 1956049 29 100.0 32 ............................. CGCATTCGTCACAGCGTCGATGCCACGGAAGT 1956110 29 100.0 32 ............................. GTGAGGCAAATCACATATTTTTAGATTGTGAA 1956171 29 100.0 32 ............................. AGGTGCTTGTCGATGTGTCCAAGGAGGTCGGC 1956232 29 100.0 31 ............................. GATTTTCGTTAATAGCGGCGCTCAGCTAATG 1956292 29 93.1 32 GC........................... ATCGGCTACGGTGAGGACCCCGAGGGGCGGGA 1956353 29 96.6 33 ............................A CGTGTTTACATCCCGGCCAATATGGCTTATATT 1956415 29 100.0 32 ............................. GATGTAAAGCCGCAGATAAGCCAGCGGAAAAG 1956476 29 100.0 33 ............................. GTGAATGCTTCAAAATTCGGGAGGTGGTTGGGG 1956538 29 100.0 32 ............................. CGATCTTCCAGGGCTGAATGACATCATTTCCA 1956599 29 100.0 33 ............................. TTTTGTATCGCCTCCACATGATCAATCAGCGTG 1956661 29 100.0 32 ............................. GATTACGCATAGCATCAAGATCAAATACTGGC 1956722 29 100.0 32 ............................. CGAAACATCCGATGCGCTGGCCTTCTCAAAAA 1956783 29 100.0 32 ............................. CGCTTCACCTGGCTGGCCGGAATGACCCCATC 1956844 29 100.0 32 ............................. GGCTTGAGCAATTTCGCGTCGGTGGCCATGCC 1956905 29 100.0 32 ............................. TACGCAGAGGACTCCGGAATGGTGATTGTGGG 1956966 29 100.0 32 ............................. AACACCGCCACCTGCATGGATTGGGAGTAGAC 1957027 29 100.0 32 ............................. TTCCCGAATGTTCCACGAACCTACAAGGCTGT 1957088 29 100.0 32 ............................. CTAAAGATTCATATCTTTCAAAGCTTCCCACG 1957149 29 100.0 32 ............................. GGCGCGTACGCGCTCTTGCCTAGGTTGGGGTT 1957210 29 100.0 32 ............................. AAGCAGCATCGATAAGTGGCGGGAATATGCCG 1957271 29 96.6 32 ............................T ATCCTTTTTCTTAATTTTCACTTTCACGGCTT 1957332 29 100.0 32 ............................. CTAGGCGGGTATCTTGGCTCGATCGAGCGATC 1957393 29 100.0 32 ............................. GCCTTTTTCGCCGCGTCATCGGCGAGATAGAG 1957454 29 100.0 32 ............................. AAATCACCATCAGCGCAAAAACCACCCGCTAT 1957515 29 100.0 32 ............................. GCTATGGCACCTGGCCTCAATAGCTTTGTGAG 1957576 29 100.0 32 ............................. CGATCTGTTGGGCGGATCAGAATATTCTGTGA 1957637 29 100.0 31 ............................. GAATAGGTTCAGGCTTGGTTAGGTTTTCGAT 1957697 29 100.0 32 ............................. GCGAAAAACGTCTGCATTGCTGCAACGCCTAC 1957758 29 100.0 32 ............................. TTTAACCACGCTTTTTGCCAAAAACCCTGCCT 1957819 29 100.0 32 ............................. GAGTTGATCTATTACAGCACTATTTTTAAATT 1957880 29 100.0 32 ............................. GGATTGCCATTGCCTACATTGTGGAATATACT 1957941 29 100.0 32 ............................. GGTTTTCATCGTCTTTACCTTCCCCCTGCGGT 1958002 29 100.0 32 ............................. CAAACTCATGCCCGTGATCGTGCCCCGTAAGA 1958063 29 100.0 32 ............................. TGAGATCGATTATTTGGATTGGCACGCTAAAC 1958124 29 96.6 33 ............................A CAGCATCGACCATCATGGTCATAACCTGTGATG 1958186 29 100.0 32 ............................. ATGGAAACCAGCACCGTGGACGCGTCTGATAT 1958247 29 100.0 32 ............................. GGCTTAGGCGGGAAGTTTCCAGCCTGAATGTT 1958308 29 100.0 32 ............................. TTTGTGCGTGCTCCACGTAGCGAATCCGTTTA 1958369 29 100.0 32 ............................. GCGCCAACAAAAATCGGGGCAAGTCTCGCAAC 1958430 29 100.0 32 ............................. GATTTTCGTTAATAGCGGCGCTCAATTGATGG 1958491 29 100.0 32 ............................. GCCATCGCTAAAGGAATCCCCATGGGCGTAGT 1958552 29 100.0 32 ............................. GTGGAGATCGATGCAAGGGCTGAAGCGATGGG 1958613 29 100.0 32 ............................. CATGTTCCGGTGATTTTTGCGGTGAGTTCCAT 1958674 29 100.0 32 ............................. TCCCAGTTCGCGTGTTGCGCTGGGGTGAGGAT 1958735 29 100.0 32 ............................. AATCTTGAGCGCGCTGAGCAGGTCATCGCCTC 1958796 29 100.0 32 ............................. AACTGGGACGTTATTCCACTTGGAGCACGCCG 1958857 29 100.0 32 ............................. CCCCTGGGAGGGCGCTAATCCATGTGGGTGGG 1958918 29 96.6 32 ..........T.................. CGGGGGTTCATCTATCGAGTCCCAGAGGGCCT 1958979 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================= ================== 68 29 99.6 32 CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Left flank : CGAACACCGCCAGCCCGAGAAACCCCCGAAACTGCGACTGCTCAACATCAAGGATCTGCACGCCATTAGCAGCTAACACTCGGAAAGCTGCTGCCGACACTCCCTGTCGATCCTGGCCTGAAATAGTAATAACAGCCGGGGTCAGCTCTGGGCGAAGGCTAACAGTTACTTGAGGCTGGTCCAGTTCAATCACCGATCTATTGTCGCACGAAGCCTTTCAAATCCTCCCAGTGCTCCCCTATTTAGGAATGACGGGCTCCGCATCAACGAATGCACACTTGCTCCCCATCCTATGGGGCAAAGTACCTTTCCTTCGGTCTTGTGGTTTTACACCTTCTTGCGGATCCTGCGGGGGTGTGCAATAGCCTTTCCCGCTTTTGTCATGGTCTAATAAGGAAGGCTAGTTTTCGCACCGATTGTATGGAGTTAATGTGCTGATTCCAGACGCAGTTTGGACTATTTTTGACTTCTTTGGTGAGTAAACGCGCAGGTAAGTTAGT # Right flank : ATAGCTTGACACTTGCTAGATATATAGTTTGTGTCCACCACTACGGAGGTATAAATGTCTATCACGCCAGAACGGGTTATGCAGCTTTTAGGTGAAGGTATGACCCAATCCCAGATTGCTAGGGAATACGGGGTTACCCGTCAATACATCTTCACTCTTGCAAAAAGAGGAGGGCATGAAGCTAGGGAAATGGAATACATCAAAGATGACATACCTTGGCCAAAAGTTAAAGATAAGCACCGCGATAACACAATCTATAAAACGCTACGAATCCACGCCCGCTATATGGAACGGGGACAAGAGGGGGTACGTGGTTCAAGTTATGTTAAATTGCTCGGCATGTATCGAAAACTTGTTCGATTCAATCAGGTTATCGACTACGACGAGTCCTATCCGCCTGTAGAAGGTTTGTCGAATACAGGCGGGTTTATGTACGTACCGAGGTCTCCAGAAGACGGGAACCTCATTATCAAGATGAAGCCCGGTGTGCGAATCACGAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGTATGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //