Array 1 96028-96896 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFMA010000001.1 Prevotella melaninogenica isolate Prevotella_melaninogenica_BgEED24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================= ============================ ================== 96028 41 100.0 28 ......................................... TGGACAGGCTGCTTTCTATGATTGTAGA 96097 41 95.1 28 .T..............G........................ TGGCGATAATACTTTCTTCGGTTGTGTC 96166 41 100.0 28 ......................................... TGGCAACAGTGCTTTCAGCTATTGCGGA 96235 41 92.7 28 GA..............A........................ AGGTAGCGAAGCTTTTAGCGGTTGTGTC 96304 41 97.6 28 .......................G................. AGGAGGGTCTGCTTTCAGCAATTGTAGC 96373 41 97.6 28 ................T........................ TGGATGGTCTGCTTTCAGCGGTTGTAAC 96442 41 100.0 28 ......................................... TGGAGATAGAGCTTTCAGCGGTTGTACT 96511 41 92.7 28 ..............................A...AA..... TGGCGACGAAGTTTTTCGAGATTGCAGT 96580 41 100.0 28 ......................................... TAATGAATATGCTTTCAGCGATTGTAGC 96649 41 92.7 28 ...........A.........GG.................. CGAAAAAAATGCTTTCGATCGTTGTAGC 96718 41 100.0 28 ......................................... TAAAGAGTATACTTTCAGAGGTTGTAGC 96787 41 100.0 28 ......................................... TGAAGTATATGCTTTCAGCGATTGTAGC 96856 41 92.7 0 ........C..............A..........A...... | ========== ====== ====== ====== ========================================= ============================ ================== 13 41 97.0 28 TCTCTAACTTCTGTAACCATTCCCAATAGTGTTACGACAAT # Left flank : AACGACCCCATCCAGTCCATATTTATGTAATTTTTGATGTGACCGAAAGTTAAATATATTAAATCTCACACTTTTCGTAGCACTAAGATAGGTGAAGTTTCTGACATATCCAAGTGTTTTGAGAACGTTGTTTTTCAGGCACTTGAAGTTCTTACAAGAATTTATACTACGAAATTAAGGTTTATAATAATTTTTGTTTATCTTTGTATTTAATTTCCCGTAAATCAAAAAAGTATTATTTATATAAAAATACTAACATGAAACAAATTTACATCTTATTAATAGCCCTACTCATGGGCTTATCAGCTAATGCAAAAAGCTCTGGTACCTGTGGACCTGATCTAAAATGGCGCCTTACTGATGATGGAGTTTTGACCATTTCAGGAGAAGGGGAAATGGATGATTATAGATTCAGCCCATGGCATGACTCTGGTGTTAAACGAATTATAATAGGTAATCGTGTTACGTCAATTGGCAACAGTGCTTTCAGCGGTTGCAGT # Right flank : TTGGAGAGTTTGCTTTCTACAATTGTATTTATAACCATAGAACAACCAAAACTAATCAGAAATATCCGAGTGTAAATCTTTAATTACCAGCATATTCTAAAATTTAACACTTTTCGGTTGCCATTTGTCGCTTCCCAAATTTCCACATATTTTTGAGACGTATTTCTGACGTGGAGAATTTGCGGGGCTTGTTTTTTGTCACACCGTGCAGACAGTTGACAAGGGTTTACAACCGTTTACGACAAGCGACAATAACCGCCCCGATATGCGGAAACAGTCACACTGTGTAGAAAAGCGACAATGGTTGACTTCCGTTCACATCCGTTTACCATTTCAGAGATATAGGATTGAAGAAATGAACCATTAAACGATAAAACGGTATGAAAGCAACCAGAAAATGCAGTTTTTGCGGCAAGTCCTTTGTAACCCGAAGCGGTATGCAAAGATATTGCAGTGAGGCTTGTCAGGCAGAAGCCAAACGAGCCAGAGTGATGCAGAAG # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTCTAACTTCTGTAACCATTCCCAATAGTGTTACGACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //