Array 1 94997-94299 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NAZJ01000091.1 Mycobacterium tuberculosis variant bovis strain MbURU-011 contig91, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================	==================
     94996	    36	  97.2	    38	........G...........................	TTTATCACTCCCGACCAAATAGGTATCGGCGTGTTCAA   	
     94922	    36	 100.0	    37	....................................	TCGACACCGACATGACGGCGGTGCCGCACTTGACGCA    	
     94849	    36	 100.0	    38	....................................	CTTTGCGAAGTCACCTCGCCCACACCGTCGAAGCGCCT   	
     94775	    36	 100.0	    38	....................................	GCGGATGGTGGGCAAGTTGGCGCTGGGGTCTGAGTCAA   	
     94701	    36	 100.0	    41	....................................	CTGCATCCGGAAAGTCCGTACGCTCGAAACGCTTCCAACGT	
     94624	    36	 100.0	    36	....................................	GCGAGGAACCGTCCCACCTGGGCCTGCCCCCAGCGG     	
     94552	    36	 100.0	    38	....................................	ACGGAAACGCAGCACCAGCCTGACAATCTTATTCTCGC   	
     94478	    36	 100.0	    37	....................................	ATTTTGAGCGCGAACTCGTCCACAGTCCCCCTTTCAG    	
     94405	    36	 100.0	    35	....................................	GCCCCGTGGATGGCGGATGCGTTGTGCGCGCAAGT      	
     94334	    36	 100.0	     0	....................................	|                                        	
==========	======	======	======	====================================	=========================================	==================
        10	    36	  99.7	    38	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                         	       

# Left flank :   CGGGGAGCCGATCAGCGACCACCGCACCCTGTC
# Right flank :  TACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGAG

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [38.3-16.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,0.74   Confidence: LOW] 

# Array family : NA
//