Array 1 177922-178419 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBOB01000011.1 Campylobacter coli isolate H043880653, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 177922 36 100.0 30 .................................... CAAAATATTGATACTTGGCAAGTTGAATGG 177988 36 100.0 30 .................................... TCGGTCCGACTTGTCAAAATGTTTTTAAAG 178054 36 100.0 30 .................................... ACCGCAGAATAAATATTATGCTTAAGTAGG 178120 36 100.0 30 .................................... CTTATAAGCTTTCTAATGACAGCGCTTTGA 178186 36 97.2 30 ..........G......................... TATTCTACCCAAATACGCATTAAACTCATC 178252 36 91.7 30 .....G....GC........................ CAAATCCAAAGAGTGTGAAATGGAAAATTA 178318 36 97.2 30 ..........G......................... CTTTCAAAATCAATTTTGCAAACTTTAAAA 178384 36 86.1 0 ......T.....GG.T...................A | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 96.5 30 ATTTTACCATATAAACAATTAATAATAGGCTAAAAC # Left flank : AGTGAGATCTGATTTATTTATAGATAAAAAAACAAATTCCATGCAGTGCCTATTTATAAAGCAGATTTTTCTACAAAAAAACTTCCAAATAAAACCCCTGCAACTACATCAAATGGAGAAACCAAAGAAGGCATTGAAATGAATGAAAATTATAACTTTTGTATGTCATTGTATAAAAATACTCCAATTAGCGTAAAAATAAAGGGTATGAAAGAGCCTATTATTTGTTATTATCATGGTTTTAATACTTCAGGAAGTAAAATAACTTATAAAAAACACGACAACAATTATCACAACCTTAGTGAAGATGAAATGGTTGTTTTTAGAAAAAATGATAAAGAATCTATAGTGGTAGGAAAAATACTTGAAATTAAAAAATACAGTATAAGTCCTTCAGGTGAATTAAGCTTAATTGAAAACGAAGAGCGTAAATGGTTTTAGATATTTTTGCTCAAAAAATAAGAAAAAACATTGATAAAATAGGCTTTTTAGATAAGTCT # Right flank : ATAGCTTTTAAATATTTAAATTCATAAGAAAATATTTCTTAATCTACTTTCATCACAACTTTTCAAAAAATCATAGATTTTCTTTCTATAAGTTGATTTATCCTTTTTCCAAGTATTTAGCGTTGGCAATGGAATCGTTGTAATTTTGGCAATTTTAGAATCACTTAAGCCTGTATTAGAAGAATTAATAGAATTTGAAAATATTTCTTTTAATTCTTCTTGATTAGTGTTTTTTAAAAAAAGATATATTTTTTCCCTCCAATTATCTTTTTTTTGTTTCCAGTCTCTAATAGTGAAATAAGGGATATTAGTAATTTGTGAAATTTGGACATCATTGTTCATCAGGCTTGAAACCACTATCTAAAATTATTTTTGTCATTACACCCTTAAGTTTATCAAAATGATTTAAAGCTTGCACATTGCTAACTCTAAGCAATCTTATTTTCCCATCTTTTTTATAAAACACCTGAAAAACTTCATCGCTTTGTTTGCATTTCACC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTACCATATAAACAATTAATAATAGGCTAAAAC # Alternate repeat : ATTTTACCATGTAAACAATTAATAATAGGCTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //