Array 1 18525-20535 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTTR01000064.1 Acinetobacter haemolyticus strain 11654 11654_54.0.0.21205, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 18525 29 100.0 31 ............................. GTTCATCAAGAAGCTGCAATATGCACATGGT 18585 29 100.0 31 ............................. TAACCATGTGGTGAATGCATCAATACAATAA 18645 29 96.6 31 ............................A ACCCAAACGCAAGCTGCCAAAACCACACCAC 18705 29 100.0 31 ............................. TTAATATCCTGACATTTGGTTTGCTTAATGC 18765 29 100.0 31 ............................. GAATGAGCTTGGCAACGGTGAGGTTTACACA 18825 29 100.0 31 ............................. TCGATATAGAAAACCTTTTCCGACTTGTTCA 18885 29 100.0 31 ............................. ATCGTATCAATGGCTGATAATGACAACACAT 18945 29 96.6 31 ............................A GCAGTTAAAGACCGAATCAATGCGTTTAATG 19005 29 100.0 31 ............................. TCAAAATACAGGTCGTTAAAGTCGGTTGGCT 19065 29 100.0 31 ............................. AAGCTGGAAACGTGCGACAAAAGGCGGTGAA 19125 29 96.6 31 ............................A TTAAAGTTCATCAAAAATTTGCTCAGCATAT 19185 29 96.6 31 ............................A CTCGCATTAATCTGCCCTGAATGGAATTTAA 19245 29 96.6 31 ............................C GAAACGCCCCATTACGGAGTAGGGATTCTTT 19305 29 96.6 31 ............................A ACCAGAAGCCCTGCCGTTTATTGATGACAAT 19365 29 100.0 31 ............................. GGAATAGACAGGCAATTTTAGAGAGTGAATT 19425 29 100.0 31 ............................. CATGGACATGTCGGGCTATTGTTTCCACGCA 19485 29 96.6 31 ............................A TTAGATCAAAAAACAATTGATCGGAAAGGCA 19545 29 100.0 31 ............................. GTATCAGTAATCTCTAACATTTGCATTCACC 19605 29 96.6 32 ............................A ATGATCGAAGTCCCAAACATATATACCTTTAT 19666 29 96.6 31 ............................A ACCATCGAAGCAACGATCTGAAAATAGAACA 19726 29 96.6 31 ............................A TCATTCAATCTCACTGATATATTTGATTCAC 19786 29 100.0 31 ............................. AGCTGTGTAAGTTCTTCTAGCGTTCTTGCTT 19846 29 96.6 31 ............................C AACCGTAATTATAACCTCTCTTGGTTTTGTG 19906 29 96.6 31 ............................A AGTAATGTTTGATTTCATCAAGGCTTTCGAT 19966 29 100.0 31 ............................. GATAGCACAGCAACACACCGGGTCGAAACAA 20026 29 100.0 31 ............................. CTCGACCCTCTGCCATTTTCACGTTGTAATC 20086 29 96.6 31 ............................A AAGAGAGCGTAATTAACAAGATAGTCCGAGA 20146 29 100.0 31 ............................. TGACCGAGCGCACGTTGGTAAAAAATTGGTA 20206 29 96.6 31 ............................A TAGCCGTGTGTGTCGTCTTGTGTGTGGCAAA 20266 29 100.0 31 ............................. TGCTGAAAGTTCGGCATAGTGTACGAAACAA 20326 29 96.6 31 ............................G CTAGTGTTGTGCTTGATAGATCAAGATTAAC 20386 29 100.0 31 ............................. CAGACTGGTTCAGGGGCAGTCTCTGCAATGG 20446 29 96.6 31 ............................A TAGCGTCCACTTGGTCGTCATGTTTGTGACT 20506 29 72.4 0 ..............G.C.TTG..GC...A | C [20532] ========== ====== ====== ====== ============================= ================================ ================== 34 29 97.6 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTGGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCGGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGCGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTTATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTGAACTCTA # Right flank : AGCTGTTCTTAAGGGCTTCTTCGGCAATATAATTTCCAAATGAAGAAGCCTACACACAAAATCTACCGCACAACCAATTGGCCTGCATATAACCGAGCTCTCATTAATCGTGGGAATATTGCCATTTGGTTCGATCCAAAAACACAATGGTATGCAGAACCACAAGGCAAACAAGGTCGAAGTAAAACCTACTCCGACATAGCGATTCAATGCTGTTTAATGATCAAATCTTTATTCAGACTCTCTTTACGCATGGTTACAGGTTTTGTTCAAAGTCTCATTCATCTTTGCAGATTAGATTGGACAGCTCCAGATTACACGACGCTTTGTAGAAGACAAAAGCATATTGATATTGCAATTAGTTATCAGAAAAACAGTGATGGGCTTCATCTACTCGTAGACTCTACTGGCTTAAAGTTTTTGGGTGAAGGTGAATGGAAACGTAAGAAATATCAGCCCGAATATCGTCGCCAATGGCGTAAACTTGGCAGAGTAAAACT # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3620-8627 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTTR01000109.1 Acinetobacter haemolyticus strain 11654 11654_93.0.0.12544, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3620 28 100.0 32 ............................ ATATTTTTGCGGCACAAGTCGAAGCCCCGCAA 3680 28 100.0 32 ............................ TAAACGAAATGGGGTAGCAGACATGCCTAAAA 3740 28 100.0 32 ............................ GCGAAGCCGTGGCACGAGTTTAAGCCTGAAGG 3800 28 100.0 32 ............................ AGCGTTTAAAGTTTGATAAGTACCTGCTGCAT 3860 28 100.0 32 ............................ TGCTGCATAATCATTTGACGTATCAGCAGATG 3920 28 100.0 32 ............................ AGTTCAGTCGAATTAATAACGCCTTCCGAGTA 3980 28 100.0 32 ............................ CTGCACACACTGCAAGCAAACACTGATATTGA 4040 28 100.0 32 ............................ AGCGTTTAAAGTTTGATAAGTACCTGCTGCAT 4100 28 100.0 32 ............................ TGGCTATTACTCATACAATGCAGATACCAAGA 4160 28 100.0 32 ............................ TGTACGCGACTATGTGCAAGAGCAAATAGCAT 4220 28 100.0 32 ............................ TGGTGGAGCTAAAGCATCTGGGCTTGGTGTTG 4280 28 100.0 32 ............................ TTCGAATCTATGAAGATATTGCCCCACTTAAT 4340 28 100.0 32 ............................ GTGAACTCAAAGGAAGCTTTTTGAGGTGCTAT 4400 28 100.0 32 ............................ ACATCATCAAGACCAGTAATCTTTACTTCAAC 4460 28 100.0 32 ............................ TGCGTCCTTGGTTGCAACCAGTGGTCCAGTGC 4520 28 100.0 32 ............................ CGCAATGCATTCAACCACATCAACGGTCGCAT 4580 28 100.0 32 ............................ AACAACTGACTGTAAGCTTAAAGATGCCTATT 4640 28 100.0 32 ............................ AAAAATATCTGGAATACGCCCATTCACGCGTG 4700 28 100.0 32 ............................ TATACGTGGAAAGATTCTTAATACATGGGAGG 4760 28 100.0 32 ............................ ATCCAAAACTTGTGAAATAACACCATCACCGA 4820 28 100.0 32 ............................ ATCAAAGATGCTTTGGATTTTCAAATTTGTGT 4880 28 100.0 32 ............................ TTGTGGTTGATCAGCACGTTGAGCAGCTTCTT 4940 28 100.0 32 ............................ TGTTTGGGTGAGCTAAGCGTCACAACATAAGT 5000 28 100.0 32 ............................ AGTATTATTTGAAGCATCAAGCTGCAGTATAG 5060 28 100.0 32 ............................ GCAAAGCCATTGTTGCAGTCATCGCCTGTAGT 5120 28 100.0 32 ............................ GTCATGATATTGAGGTCTTTCATTAACTCATA 5180 28 100.0 32 ............................ ACTATTTCTTCGAACCTCCTCAGTAAATTGAT 5240 28 100.0 32 ............................ TGAGCCTTGGCTTGCTGCTTTGTTGAATCGGT 5300 28 100.0 32 ............................ TCAGTCCAAGCCCACGAATCAACATCCTGTTC 5360 28 100.0 32 ............................ AAATAACTATTAAGCATATTCAGAAAAACTAA 5420 28 100.0 32 ............................ AAGCGACTTCATACCGCCAGCTAGAGATAAAT 5480 28 100.0 32 ............................ TTAGCTTTTAATAAGGTATGATCACCAATAGT 5540 28 100.0 32 ............................ ATTAAATCATCAAAGCAGAACCTTTCAACAGG 5600 28 100.0 32 ............................ AAAGTCATCATGTACATAACTGAACATGACAA 5660 28 100.0 32 ............................ ATGTAGTTCGATGTGCTGGATGCACGACACGC 5720 28 100.0 32 ............................ AATAATATTTAGCTATCAGACAAAAAAAGACA 5780 28 100.0 32 ............................ GCTGACAATATTATCGCTGACATGGCGAAGCA 5840 28 100.0 32 ............................ TGCAACTAGCTGACCAATTTGGCTTGATGTGT 5900 28 100.0 32 ............................ TCACCAATAGAGTATTCGCCAAAACCATTCTT 5960 28 100.0 32 ............................ ACCATCTAAAGTCATGATTGGTCTTTGGAATA 6020 28 100.0 32 ............................ TTGCGCAGTCATTCAGCGTATTGCGTGGCTAT 6080 28 100.0 32 ............................ GTTCATGCGTAGGTAGTCGCCAACCTTAACCG 6140 28 100.0 32 ............................ ACTCAGGCGCGCCATCCACGATTTTTTTCATT 6200 28 100.0 32 ............................ TTTAGTTGTTCGTATTGATCAGAAGCAAGAAA 6260 28 100.0 32 ............................ ATGGAGAAGCCTCAAACAATCGTAGGTTTTAA 6320 28 100.0 32 ............................ ACTTCCGCTCAATATCAAGGCATTGGTTGCAT 6380 28 100.0 32 ............................ TGAAATCAATGTGAGCAAAGATCAGCGTGAGA 6440 28 100.0 32 ............................ ACTGCATACATTTAAAAATATGTGCAATCACA 6500 28 100.0 32 ............................ AAAAACACGTAGGGCGTGTTGAAAATGAGTTA 6560 28 100.0 32 ............................ GTTATCTATTTCATCTGAAGTTCCTACTTGTA 6620 28 100.0 32 ............................ ATGAAAATTATTTTATAAAACCAGATTTATAC 6680 28 100.0 32 ............................ TATGTTGTGGAGTGTCGCATTAGAAATTGTTA 6740 28 100.0 32 ............................ TACTATTATAGTGATGAAGCACTTCAAATTAT 6800 28 100.0 32 ............................ TCAATCTTTACAAATTGGCTTGATGATACTAT 6860 28 100.0 32 ............................ GTGAATATAAAGCTGTTGAAGCTGAGAAACAG 6920 28 100.0 32 ............................ TTAATGAATTATCCGTAAGCACAAAACATCTC 6980 28 100.0 32 ............................ TCCCATTAAGTGCCAATGCTGCTTATAAACTA 7040 28 100.0 32 ............................ TGAGAGCTGAGAGCTTGTTGTTTTTAAATCCG 7100 28 100.0 32 ............................ TATCTTTGAGTTTTGTAGAGTTTTTGGCTTTA 7160 28 100.0 32 ............................ TGAACACACCTCAATTTTCGAGGAATGATTAT 7220 28 100.0 32 ............................ TGTCCAGCGTTTCATTGTATCAAGCACGTCAT 7280 28 100.0 32 ............................ GTGCTGATCAATATGCGTTGCTGTGCTATCAG 7340 28 100.0 32 ............................ CATGAGAGCCCATATCGTCACAATCAATTCCC 7400 28 100.0 32 ............................ AATGTAAGGAATGGATACCATGGCTTTAAATG 7460 28 100.0 32 ............................ TCAGGGTTCAACATTTTTTCAGGGTGCAATTC 7520 28 100.0 32 ............................ ATCACCACTGTAAGAACACGTGTAATCGCAAT 7580 28 100.0 32 ............................ ATTGGCGTACGTCATTGAAGCCAATGTGATCA 7640 28 100.0 32 ............................ ATTTTTTTAAAAGGATTCATGCATGCTTCCAT 7700 28 100.0 32 ............................ AAATCACGACAACAACGCCCAAAATAAACAGT 7760 28 100.0 32 ............................ ATTTTCACCACCAGTACCATTACCAATGTTCT 7820 28 100.0 32 ............................ TCAGCTTCGAGACCTTGTTGCTCAAAGCAAGC 7880 28 100.0 32 ............................ ATAAGAGCGAGCGGCGGAGCTTTAGGGGGCGG 7940 28 100.0 32 ............................ AATATTGTCGGAACGAGCGGGGACTATACACG 8000 28 96.4 32 ...................A........ ACATGCCCAAGGCTAAAGAGCTGACGAATAAA 8060 28 100.0 32 ............................ GTTCATCGATCTGAAATGTGTACCCCCCAAAA 8120 28 100.0 32 ............................ CGCGAAATACTCCGCAGCGTCTAACATTTCCT 8180 28 100.0 32 ............................ AACAGAACAAGCGCACACGCCCAAAATAATAC 8240 28 100.0 32 ............................ CGACAAAAGTTTTAAAGCTCACTTCGGAGCTT 8300 28 100.0 32 ............................ ACGCCCTCCGACCCATTCAGTAATCTTTTTGA 8360 28 100.0 32 ............................ TTGACCTCGCGCGCTACGAATTGCCCGATAAC 8420 28 100.0 32 ............................ TACGGTATCAAAGGCTTTAAAAGAACTATTAG 8480 28 100.0 32 ............................ AAGATGCAGTTGCACTTGAAGCTGAAGTAGCA 8540 28 100.0 32 ............................ AAAAGATTTAACGCATTGGAGAAATAAGCGCT 8600 28 89.3 0 .......................TTC.. | ========== ====== ====== ====== ============================ ================================ ================== 84 28 99.8 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGTAAATGCGATTTGTCTTTGTAGATTACTCATCTCAATTGTATCTGCATCCACGATCGTTATTTTGCCTACACCTGCACGAGCAAGTAACTCTGCACTCGTACAGCCGATCCCTCCAGCACCAACAATCAGTACATTTGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAATAAAATCTGACGACTGTATAAATGCATTTCGTCATCAGTTAATTCAAAAGTATGTTCTAGATGATCAGACACGTTCCATTATCTCAAAATCGGCTTAATGAATGCTGATTTTAAGTGGCTAATCTCATTTAGCAAAGCATTTAATGCTTGCTGCATCATTTATTTTGACAAATCAACGGATTTACCCCAATATTTTTATTACTCTTTAACAGCTTAATAAAATCAATACCTTATGAATCAGCATAAAAACTTTGGGTATTGATGTATTTTTCACCACAAGTTAATGTTTTTTCTTAATTTATTTATGCTATTTTATA # Right flank : ATTACGATTTCTTTCGATCATGCATCATTTCATAAGTTTGTGCTCTTAATAACTCCTCTTTGGTTGCAAATGAATTATTTCTAAGCTGGTTTAAAGCACGTTGCTTGCTCGCATCATCAACATCGCTCTTTAAAATCTGATCACGTTGTGACAAATAATTATTTACCCGATTCTGCCAAACCGCTTCTTCTTGATCGACTTTCTCCAAACGATCAGCAGCCTCAACACCCAACAAGCTTTCCCGCATATTCCGCAATTCTTGAGCAGAGCCACCTTTTTCCTTAATTTCTTGTGTCAGTTGCTGTAATTCAGCAAATTGCATCGACACTCGAACACCATCAGCCAAAGTAGGAGGCAATTGATCTATTAACTTTGCTAACTCAGTTGCTTTTTGCTGTGCTGTTAAAGTCTTATTGGCATGTATACGCATTTGATCAATACTGAATTGATTAAAATTTCGTTCATTTCCAAAAAATGCTTGAATTTCTGCCGCATTGAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //