Array 1 573764-573269 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWBO01000044.1 Niastella koreensis strain DSM 17620 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 573763 30 100.0 36 .............................. ACAATAGTGTTATGAAACTCTTGAAGAATCGAGTTT 573697 30 100.0 36 .............................. TTTTAACCTGCTCAGGATAGCTTGTAGCGTGCCACA 573631 30 100.0 37 .............................. GCTAATCGGACGCATCTATACGGCAAGCGGTAACAGT 573564 30 100.0 37 .............................. ATGTCCAGCCTGTTTTTATTAGACATTGCGCGACTGA 573497 30 100.0 37 .............................. TATAAAAAGTAGCCACCCAATAATACCAGACCCAACA 573430 30 100.0 35 .............................. TCACCAAAAGGCGTGTTTACTTATGCGGGTGTCGG 573365 30 100.0 37 .............................. GCTAATCGGACGCATCTATACGGCAAGCGGTAACATT 573298 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 100.0 37 GTTATAATCGCACCATGGAGGAATTGAAAC # Left flank : AATTGAAACAAATCTTGAAGAGTTTGCTTCTTAGGGGTTGCCAT # Right flank : AGGAGAAGAAGGAAACACGTTACTCATCATCGCCGCCGGTTATATTTTTATCTCTCCAAAAATTTGATTGAGTGTTTTGCTAAACTTCTTTTCTATGCATGGATACATGCTGACCGTTAGACGCAAATAACGCTCGGTCGCCATAATGGTCTTATACCCCACGACGGAACAGTCAGGGGGTATGGTGTGCTCAGCACGAATTCGGACAGTTTTATCACGTTTGTATGACAATTAATGATATGTATATCGCCAACAACGAAGGATAGTTGAGTGTTTCATTTCCCCAAAGACCTATATTAAATAGTTGATTTTCCTGAAGATATAACGCCGTGACATACCCCATCCGGTCCGCAAAAAAAGGATCATCAGCAATGGCGGTCGGTTTTGCTTTTTATGCCATTTTACCTTAGGCGGTTGATACCCCAATTAAACTGAGGCAAATGCACTTCTCGTTCCAACTCCACTAATCATTAACCGCTGTATGGCCCGGCTGCAGGCTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATCGCACCATGGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 3280-35 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWBO01000055.1 Niastella koreensis strain DSM 17620 contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3279 30 96.7 34 ......................G....... TGTTATAATCGACCGCTCCTTTAGCGGGTTTTTT 3215 30 100.0 36 .............................. TATATTGATTTCAACGGCTTTTGTTTTTTGGGACTT 3149 30 100.0 36 .............................. AAATAATCCTTTAAAGTGATTCGCAAATCACCTATT 3083 30 100.0 36 .............................. TGGAGAGTTAGGATTCAAAATAGGTTTGGTGATAGC 3017 30 100.0 36 .............................. TGTTGATTCCGCCCGGTTTGGTTGGCGGTATAATAA 2951 30 100.0 37 .............................. CTACCATTGTTAGACGATGTATTATTTACGGGTGCTG 2884 30 100.0 36 .............................. TGTTGATTCCGCCCGGTTTGGTTGGCGGTATAATAA 2818 30 100.0 36 .............................. ATGGTTGTAACTTTTACGGGAACCTTTTTGCCATCG 2752 30 100.0 37 .............................. AGATGGACCCTTCCTTCATGCCCTTAATGATCTCCCG 2685 30 100.0 35 .............................. ATAAAACATAATTGATATGACATTATCCCTATACA 2620 30 100.0 36 .............................. TGATATTTGCTTTTAAAAGAGCCCGGCCAGCGTGCA 2554 30 100.0 36 .............................. ACAGCATGCCTGTCGGTACCTGTTACGCTATACCGG 2488 30 100.0 36 .............................. TAAACTCTTTTTTAAACCAACAGGGGTGTTGGTAGG 2422 30 100.0 36 .............................. ATGAAAGTGCTGAAGGTATCGGGGGTACGCTGACTT 2356 30 100.0 36 .............................. AAGGCGAGTACCATCGTGCAATATAGCGGGCCAGGG 2290 30 100.0 37 .............................. TAAATACACGGAATTCACGATCGCAGCGGCGGGCCTT 2223 30 100.0 33 .............................. CGAATTAGAGCAATATTTTAAAACGGCCACCCA 2160 30 100.0 37 .............................. TAAATACACGGAATTCACGATCGCAGCGGCGGGCCTT 2093 30 100.0 33 .............................. CGAATTAGAGCAATATTTTAAAACGGCCACCCA 2030 30 100.0 36 .............................. TTTCATCTGTTGACTAGGACAGCCCATATAAAGCCG 1964 30 100.0 37 .............................. GTCGTTCGTTCAGGCAAGAGGAGAAACACCCAGGGAA 1897 30 100.0 35 .............................. TACGTACACTTTGGGTTTTGTTTGGGTAACGATTA 1832 30 100.0 35 .............................. AAACCACCGGTATACAGGTCCGGGTCTTCATCTAT 1767 30 100.0 35 .............................. TTAATGAGGTAAACGTAGTCGGGGTCGCTGACCGC 1702 30 100.0 35 .............................. ATACCTGGTTGACTACATTGCGCAGGCCTGGTAAA 1637 30 100.0 34 .............................. TTGGTTTTCAATATTCAAAATAAAGGGTTTGGTG 1573 30 100.0 36 .............................. CCAGGTGCAAACCAATTTGCATTAACACCTCCGCCC 1507 30 100.0 35 .............................. TATGAGACAAGTCTCTAAACTCGACGGATATTGTG 1442 30 100.0 34 .............................. TCAAAACACACCCTACACTAGGTCCATTATTCAG 1378 30 100.0 36 .............................. TTGCTTGCCATATGAAAAACTAATTCGCACACAACG 1312 30 100.0 34 .............................. TCAAAACACACCCTACACTAGGTCCATTATTCAG 1248 30 100.0 36 .............................. TTGCTTGCCATATGAAAAACTAATTCGCACACAACG 1182 30 100.0 35 .............................. AAGTTGAATGTCACTGGTATTTCCACGCCACAACG 1117 30 100.0 36 .............................. TCGATCTGCCAGGAATAATGACCATGTGCCATTCTA 1051 30 100.0 35 .............................. ATTGCCATCAGGCAGGTTTTTAATGGGTCTTTCCA 986 30 100.0 35 .............................. AAGTTGAATGTCACTGGTATTTCCACGCCACCAAG 921 30 100.0 37 .............................. CAAACAGACTGAGTATGTTGCCGACGGGTTCAGGCTT 854 30 100.0 36 .............................. ATTAATGCAGTTTTTTTGTCTTCAAACTCAAACCGG 788 30 100.0 36 .............................. ATATAACGATTTTATAGAAGAGAACGTAGATAAGCT 722 30 100.0 37 .............................. TGAAAAAGGCCTCACAAGGGCCAAAACAGCGAAAAGC 655 30 100.0 35 .............................. TTACCAGCGGAAGCTCGGCGCTTGCTGGCGCAACC 590 30 100.0 35 .............................. ATGATTATAGCCATGGCCAAATAATAAACAAAGCT 525 30 100.0 36 .............................. AGATTTTGAAGGCAAAAGCTCCGCTATCGTAAAATT 459 30 100.0 36 .............................. GTCAATATTGAAAAGGTCGGCGGCAATGGAGAATTG 393 30 100.0 36 .............................. AGTGGTGATCCCAAAGCGCCTTCTTCTGACAATATG 327 30 100.0 36 .............................. AAATCTTGAAGAGTTTGCTTCTTAGGGGTTGCCATA 261 30 100.0 35 .............................. AAAGGTATGCCGGTATCTTTTAGGAATCGCATGTA 196 30 100.0 36 .............................. ACAATAGTGTTATGAAACTCTTGAAGAATCGAGTTT 130 30 100.0 36 .............................. TTTTAACCTGCTCAGGATAGCTTGTAGCGTGCCACA 64 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 50 30 99.9 36 GTTATAATCGCACCATGGAGGAATTGAAAC # Left flank : GTATAAGCCATTTAAAGCCTGGTGGTAATATGTACATAATTTTAGTGTATGATATTGGAGAAAAGCGGGTAGCCAAAATGCTCAAACTATGCCGCCGCTACCTGAACTGGATACAGAACAGCGTATTTGAAGGAGAAATTACCAGTGTTAAACTGAAGGAACTCATTCATGAAGCGAGGCGCATAATGGAAGAGGAAAAGGACAGCCTGATCATCTTCAAAAGCCGGGAGGAGAAATGGCTGGAAAAGCAGATAGTTGGAAAAGAAAAAAATGATCTGGATAATATACTTTAGTCGTCGTTGTCATGTTATTGCAGAAAGGAAATATAGTTTTTATACTCCTGATTTTGGGAATTGCCGCACCGAAAGGCACTTGAAGAGGTTGTCGATGTCCGCAAAGAATCCCAGAAATGGGGAATGACAACTTTTTAAGTTCTAATAAAGATGTTTATTTCACTAGAAGGGCTGAAAAACAATGTTTTATTTTGCTGTAATAAACGG # Right flank : CATTAGTAGAACCCGCGCATAAGCGCCGACATCTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATCGCACCATGGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : NA //