Array 1 485261-488077 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXCT010000001.1 Prevotella nanceiensis strain SCHI0011.S.12 Contig_1_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 485261 47 100.0 30 ............................................... TTTTTGCTTTTGTGTACATTTGTGTACATT 485338 47 100.0 31 ............................................... CCTTGCGCTTTATTGTAAGAAAGCTTTTCAA 485416 47 100.0 30 ............................................... TTTGCGCTGCTGTCTGTGTTGCGGTAGCCT 485493 47 100.0 30 ............................................... AAAAGCTCTTTTTGCTTTAGCTCCTCGACC 485570 47 100.0 30 ............................................... CCTATTCAGCACAAGGAATTTATACCCCCG 485647 47 100.0 30 ............................................... TTTAAAACGACCTCAAAAGCAGACTCTATT 485724 47 100.0 30 ............................................... AAACGTGGAGTTATTTTATTTTTGGGGGTA 485801 47 100.0 29 ............................................... ATGTCAGAGAATAGTTCGCTTACAAAGCT 485877 47 100.0 29 ............................................... ATGCGTGGAGTGTATGAATTCTTCTTCGT 485953 47 100.0 30 ............................................... ACGACTGGTTTACTATGAGATATAGAAATA 486030 47 100.0 29 ............................................... TTGAAGAATTAATCAATGAGACTATTTAC 486106 47 100.0 30 ............................................... ACAAGAAGGGTATTTACTTGCTAGCTGAAG 486183 47 100.0 31 ............................................... CATATAATAATGTATATAGAGTAATTTATTT 486261 47 100.0 29 ............................................... ATCTTATTGTGTTTGATCGCTATCTATAT 486337 47 100.0 30 ............................................... TAAGAGCAAGAATAGAAAAAGCAGGCTATA 486414 47 100.0 30 ............................................... AATTTTGTCGTTATAATCTTGTTGTTTTTT 486491 47 100.0 30 ............................................... ATTACGATTTAGGACGTAAAGAATTAATAG 486568 47 100.0 30 ............................................... ACTTCTTTGTACCTGAATTTGAGAACCTCG 486645 47 100.0 29 ............................................... GGGGCAAAGTTCAAATAGTAGACTTAGCA 486721 47 100.0 30 ............................................... TGCATAAAAGAAACCCTTGCTTTTTGCACT 486798 47 100.0 30 ............................................... GTTTGCGACACGAACAACTGAGCCGTTTGA 486875 47 100.0 30 ............................................... ACTTCTCAATATGGCATAACAACAAGTGAA 486952 47 100.0 30 ............................................... TTCCATTTTATAAACTAATTTAAATTATTG 487029 47 100.0 30 ............................................... TACAAGTTCGTTATATAGTTCAGAACAATG 487106 47 100.0 30 ............................................... TATCTCGGTGTCTTTGAGGTCGTTAGTAAC 487183 47 100.0 30 ............................................... TTCCTTCTTCATATTCATCTTTCAATTTTC 487260 47 100.0 30 ............................................... TTCCTTCTTCATATTCATCTTTCAATTTTC 487337 47 100.0 31 ............................................... CGTGATGCATACGAATATTATGCAGGCGAAG 487415 47 100.0 30 ............................................... CCTTTGCTTTTGAGCGTCAAAGGATATGAA 487492 47 100.0 30 ............................................... TCAAAGAATAGAGTTAAAGTGCCATCTTCT 487569 47 100.0 30 ............................................... AATGAAGGAAGTGATGACGTGGCTTTATTA 487646 47 100.0 30 ............................................... ATAGTAAGGGAGTTCTCGAAAGCTCTCGAC 487723 47 100.0 30 ............................................... AACATTATGACTGGTTATCGTATGCAAGCT 487800 47 100.0 30 ............................................... CATATTTATCTTATGTATAAAATCTTAGCT 487877 47 100.0 30 ............................................... ATGTGGCATAAGGTCCAAAGAGAGGACAGG 487954 47 100.0 30 ............................................... GAAAAGAAGATTGTTGGACGGACTATGTGC 488031 47 97.9 0 ...................................A........... | ========== ====== ====== ====== =============================================== =============================== ================== 37 47 99.9 30 ACTGTATTTGCATAAGCAAAGTTACTAAATTTAAAGCAAATAACAAC # Left flank : TATTGGTATTGGGGAATACTGATAAAATAAATAACTCATAATAAATTCTATTATGAAACAATATGAACGAATAAGTCAATATAGAGTTATGTGGATATTTGTACTTTTCGATTTACCAACCGAAACACAAAAAGATATTAAGGCTTATGCGCAGTTTCGGAAGAATATTATGCGAGATGGCTTTACTATGTTTCAGTTTTCAATTTACATCAGACAATGCTCTAGTATCGAAAATGTTGAGGCTCACATAAAAAGAGTAAAGTCATTTATGCCTAACTTTGGAAAAATAGGTATACTTACACTCACTGATAAACAATTCGAAAAAATGGAATTATTTTTTGGATGTAAGCCTCAAGAAATCAAAACTCCTAACATTCAACTTGAAATGTTCTAAATAAAAAAGTTCTCTCTTGATCTTAACAGAGAGAACTTTTTTGTTATTTTTTATTTTTACAACATCCTTTACAATGCATTCATTATCAATCTTTTACTCGATTCAT # Right flank : CTACTTAGCATCTTAAATAATTTCTATATAAGCATCAAAATAGCTCCAAATTCATCTAACCTTTTTCCTTCTTCTATCCTAATTCTATACTCATCATAAAACAAGTAACAAATAGTTATAGATGAATATGATTTCCTCCTCTCAATAAAAGCGTAACTTTTACATCGCAATAACATTGCTTTCAACCTCTAATATCAATGCTTTTAATGCTCAAAAGCAGTACTTTTAAATTGAACATAAAACAAGATGAAAATAAAACGATAAAAGAGTAGAAAATGAAAGCGACAGATAAAGAACTACTTCGACAATAAAACATACTTTTCTCAATAATGAAAAAGATAAGTTGAAGTATTCTTTTATAGTCAAGAATGAATCTAAACGGAAAAGAACTAGCAAGAAACTACATTATAAAAATCTTAAACAGAACACATAAAATAATGATTTTTATTTATAAAGTACACAATTCCAACAGTCTATTTAGACATCATTATAAAGTAAGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTGTATTTGCATAAGCAAAGTTACTAAATTTAAAGCAAATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.47%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //