Array 1 1616804-1612696 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP077221.1 Aeromonas sp. FDAARGOS 1417 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1616803 28 100.0 32 ............................ AAAGACCGCCTCCACTTCGAGTGGTTCGGGGA 1616743 28 100.0 33 ............................ GTGCAGGGTTTCTTCTTTCATAGTCACCTAGTC 1616682 28 100.0 32 ............................ ATGCTCAACTTCAACAGCAAGACGGGGGCCGA 1616622 28 100.0 32 ............................ GCAAAGCAATGTCATGAGCGCGAGTAGCAACC 1616562 28 100.0 32 ............................ TACATGGAATACGAAGAGTATGAGGCCCTCCG 1616502 28 100.0 32 ............................ AACGAACCCGCCCGGCGGTCGAGGGAACAAGA 1616442 28 100.0 32 ............................ AGTAAGGAGTAACGCCAGTGCAATCCCTGCGC 1616382 28 100.0 32 ............................ TCCACCCAATCGCCCATCGCCTCTTCGGTCAG 1616322 28 100.0 32 ............................ GCGCCGCGCTGCGTGATCTGCCGTCGGCGGTG 1616262 28 100.0 32 ............................ TGATAACCATCGCCACAACAGTGATCCTCACG 1616202 28 100.0 32 ............................ CTCGGGCATATGCGACAGAAGCGCACCAGCAC 1616142 28 100.0 32 ............................ GCCAGGCGGTTCTAGCTCTATCTGAAAAGATC 1616082 28 100.0 32 ............................ GCAAGCCTGAAGGCAGCCAACCAGGAGATCGA 1616022 28 100.0 32 ............................ AGGACGAACACCCAGAGCCGCTGGCCGACGAT 1615962 28 100.0 32 ............................ TGCTGGCCGTCCTGGGGGCGATGGAGTGGAAG 1615902 28 100.0 32 ............................ AGGACACGGGATCCGGAATAGTGGGCGCTGAT 1615842 28 100.0 32 ............................ CGCTGGAGCTGCCCGACCTGGCCGCCGCTTAC 1615782 28 100.0 32 ............................ TTCGTGATCGCCTACCCGGATAGAGCCCATAC 1615722 28 100.0 32 ............................ ACTGGCCATCCTTAAAATAAGGGTCTCCAAGC 1615662 28 100.0 32 ............................ AAGGTTCGTTGGCCGCACCCGAAACGCAGTTT 1615602 28 100.0 32 ............................ GTTACCGTCACCATTGCTGGGAAAGTGGTCAA 1615542 28 100.0 32 ............................ AGAAGGGCAAAGAGGTTTTCCATGCCGCCCCC 1615482 28 100.0 32 ............................ CAGACGGCGCAAGGGCTGGCGGCAATCGAGAT 1615422 28 100.0 32 ............................ TGTGGCTAAGCCCACACCTGACCAAGAGCGAG 1615362 28 100.0 32 ............................ ACCTTGGCACCGCTCTGTTCAAGCTCACGCTC 1615302 28 100.0 32 ............................ TGCTGGGTGTCGCCGTCCGTACTCAGCAAGTT 1615242 28 100.0 32 ............................ ACCGGGCTTAATCAGGACCTCAACATGACCAT 1615182 28 100.0 32 ............................ TATTGCAAAAAGAACTGCGGTTTGGACGTGTC 1615122 28 100.0 32 ............................ AGACACATTGAAGTGCAGCGGGTGGCCGTCCT 1615062 28 100.0 32 ............................ ATGAAAGGCCGCCCACACCGCACACCAGTAAT 1615002 28 96.4 32 ..................C......... CTGAGGGGGTAGGGGGGATCAAATCCTTCCAC 1614942 28 100.0 32 ............................ GGTAATCGGCACCTGTCTACGCACTGGCGCCG 1614882 28 100.0 32 ............................ AGGTGGCAGCGGGCTGGCGCGGTATATTTCAG 1614822 28 100.0 32 ............................ AAGACTACCCGCGCTGGCAAGGCAAACTCGGT 1614762 28 100.0 32 ............................ AACGCCCTTGGGCTGCCCTTCCTGCCCATCCT 1614702 28 100.0 32 ............................ TCTGTCCAGCTGCCGTGCGGCTCGCACGTTCC 1614642 28 100.0 32 ............................ GGACGGATTACTCAGAAAGCAACGCGGGCAAT 1614582 28 100.0 32 ............................ AATCCCATAGCGGCCCGGGAACGTGGCACAAA 1614522 28 100.0 32 ............................ TAGCCATCGCAAAAGTGTTATATCTTATCTAA 1614462 28 100.0 32 ............................ TCTGAACCCCTTCAAAATGCACTGGCTCAGGT 1614402 28 100.0 32 ............................ ACAGGATTCCGGCCAGACATTGACAGCCAGTG 1614342 28 100.0 32 ............................ GAGCGTGACTCACCGCGCTTGGATAGGATCAG 1614282 28 100.0 32 ............................ AGCGCGGCATCGCTGATATCCACTTCCTCTTC 1614222 28 100.0 32 ............................ ATCAGCGATCCTTGGCCGAACAGGGCATCAAT 1614162 28 100.0 32 ............................ GAGCCCGAGCTGGGAGTTCGCGGCCAGTTATT 1614102 28 100.0 32 ............................ GCCGAACGAATGGCGGCAATCTCGGGGGAGTC 1614042 28 100.0 32 ............................ TCGATCCATGCATCGAGCAAATGACCGTTGAC 1613982 28 100.0 32 ............................ ATGGTGCCGATGATTTGAATGGGCTGGCGATC 1613922 28 100.0 32 ............................ GTCATGCCATTCTCTTCTGCTGCGCTGCGCCA 1613862 28 100.0 32 ............................ ACCAGGTAATAACCGGTATCAGTCAGGTATTC 1613802 28 100.0 32 ............................ AGATCCTGCCGATGCGTATGGTGCACCACGTC 1613742 28 100.0 32 ............................ CCGGATAAAATGTGCTGGTCTAACCAGTAAGG 1613682 28 100.0 32 ............................ ACAGCAGTTCGGAGCGCGGCACGAAATACTCG 1613622 28 100.0 32 ............................ AGCAATGCTGGCTCTGAAAAGGTCGAGCTGCA 1613562 28 100.0 32 ............................ GCATCGCCAAGGTGGGTGCGCCAGCAAAAGAC 1613502 28 100.0 32 ............................ ATCGAGAGCATATCGAGACGGCGCAGGCGCTC 1613442 28 100.0 32 ............................ TGATGGCGGGTCAGCTCAGGGATTGGCAGCTC 1613382 28 100.0 32 ............................ TGGCGTTCCGGTTGGTATCAGCACCATCACAC 1613322 28 100.0 32 ............................ ACTATCGCCGGGTTGCGGTGCTGCATGGCGAG 1613262 28 100.0 32 ............................ GGGAGCTGAAAGACCCTCGCTATCCAGTGCTA 1613202 28 100.0 32 ............................ GATTCAACGCCGGTTCAACAACCAGACGTTGC 1613142 28 92.9 32 ...........G..........A..... AAGATGTCCGGTCACTGGTTCGGTTATTCGCA T [1613139] 1613081 28 89.3 31 .T.........G.............C.. CTATGTGTGTGTTTTGTGTCCCTGTGCTTGT 1613022 28 96.4 32 .....A...................... ATTGAGATTGAGCAAGTGAAATAAGGCCATTA 1612962 28 96.4 32 ......................A..... TGCAGTTGCTCGACCGTTCCCCCGGGCCAGCA 1612902 28 92.9 32 .T.........G................ CGCCGAAGGTCGGGCGGGTCGCGGCCAGCTGG 1612842 28 96.4 32 T........................... GGCAGGGGGCCGCTGGGGCGGCTTGCCGGTGA 1612782 28 92.9 31 .T....................A..... AGGTGGTAGTGCAGTTGGTGTAACCCTGCTG 1612723 27 78.6 0 ....A.....A.......C.-.CC.... | T [1612721] ========== ====== ====== ====== ============================ ================================= ================== 69 28 99.0 32 CCTCGCAGCCGCACAGGCTGCTTAGAAA # Left flank : TTGGCCGACTTGCTTAACCTCACTGAGGTGAACTGGTTGCAAGGGATGCGTGATTACATCCATATCGGAGAGCTTGCCACGGTGCCGGAGGGAGCCTGTTTTAGGGTTGTAAGAAGGGTCAATGCCAAGAGTGCTCGTAACAAGCGCCGTCGTTCTGTGGCAAAGGGTTGGTTGACCGAAGAGGAGGCGCTGATACGCATCCCTGATACTCAGCAGAAAGTAATGACACTTCCTTATGCCGAGATGCACAGTCTTTCTACTGGTAGCAGGATGCGGCTCTATATCGAGCACGGTCCCTTGCTCGATATGCCGGTGGTTGGTGAATTTAACGCATATGGATTAAGTGCCACGGTTACCATTCCCTGGTTCTGACCCTATTTTCAAGGGTGTAGCTAACACATTGATTCCAGGTGTGTTCTACGCCCTTGCTCGAATAGGGTTTTGTGTATAAAGCTAACCGAGTTCTTTAACAATCAATCAGATAGCACTAACGTGCAACA # Right flank : CTTGGCCGTGGCCTCGGCCGCTATCAATAACCAATTCTGTTTCAAGAGTTCATGTAGCCTCGTTGTTTGAGTGATACAACGCCATTACTAGCAACCACCAAATGATCTAGGGTTCGGATATCAACCAGAGACAAAGCACTCTGCAGTCGCTGGGTTATTTCTATGTCTGCTCGGCTGGGTTCAGGGTGACCTGACGGGTGGTTATGCACCAGCATCAGAGCTGCAGCATTGAGCGCCAACGCACGTTTAACAACTTCCCGTGGGTAGACGGAGGCACTGCTGAGCGTGCCGCGAAATAGCTCCTCATATGCCAGGATCCGATGCTGGTTGTCCAAGAACAGCATGGCAAATACTTCATGCTCTCTGCTCTGCAACAGGGTTTGTAGTGCCTGCTGAGCCAAGTGTTTGTCTGTAATCGCGACGCCCTTGGCCAGTTTCTGACGGGCAATCTGGTTGGCGATAGTCAACAGGTCCTCTTCGTTAATCAGCTCAGTGACGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCAGCCGCACAGGCTGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACAGCCGCACAGGCTGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //