Array 1 21593-26744 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNUT010000010.1 Lactobacillus delbrueckii subsp. lactis strain FAM 21783 FAM21783-i1-1_scf10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 21593 28 100.0 33 ............................ GCAACTGGAATTGGCTTGTTTGCCAAGTCGTAG 21654 28 100.0 33 ............................ TAATCACGCGCTTTGATGAATTTGATTTGTCAA 21715 28 100.0 33 ............................ AGTGGGAGAGATTTGGCTAGTACGTCTTTCCAA 21776 28 100.0 33 ............................ TGCAGTGGTATCTTTGAACGGCTCTGCTAGTGA 21837 28 100.0 33 ............................ TCTTAAGCTCATACTTGATAATGTCTCTAATGA 21898 28 96.4 33 C........................... CGCTGAACGTGCTCTCCAGCTTATCACTAGAGA 21959 28 100.0 33 ............................ CTGGACAATTGAGCACAGCCCAAAAGACCCGAT 22020 28 100.0 33 ............................ CATCAACCACAAGATTGACAAGATCCACAAGCC 22081 28 100.0 33 ............................ TTCCAGCAATGACGGTGTTTAGGCAATAATCGG 22142 28 100.0 33 ............................ CGTTTTAAAAGCCCGGAGATTGCGTTTTGCGGA 22203 28 100.0 33 ............................ TCACACAACAGATAGTTGACATCGGCTGGCCAT 22264 28 100.0 33 ............................ TACTCCTCTGTTAGATCACAGTCACGCTTGTAT 22325 28 100.0 33 ............................ TCACTCAAGACATGAAAAATCCGTGTTTCACTG 22386 28 100.0 33 ............................ TGAAGATGGCGGTGGCAGTGTTGGCAATCCAGG 22447 28 100.0 33 ............................ TCGCTGACGCTACCGACAACGCAACAGGCGATC 22508 28 100.0 33 ............................ CTCAAACACAGCGAAAGAGTTACCAGAGTTTGA 22569 28 100.0 33 ............................ TGGAACCGATCAAATTTACAAGCAGTTATATCT 22630 28 96.4 33 .................T.......... TTTATGTCGGTGATGACAAGATGATTCACGTTG 22691 28 100.0 33 ............................ CGCTTGTGTATCAAGGCCTCAAGGGGTACAGCA 22752 28 100.0 33 ............................ TTAGTTTCAAATGCAAGCCCCTTTTTTATTTTT 22813 28 100.0 33 ............................ TAAACCTCCTTTGGTCAAGAAGTATAAAAACAA 22874 28 100.0 33 ............................ CAATGGCCTCCGCCAATGGTGGCAGAACTTACA 22935 28 100.0 33 ............................ TCGATGAGCTGTCCTGCATAGCCTTCTGGACGG 22996 28 100.0 33 ............................ TTGGTGTAGGTCTTGGCAGGGACTATCGTGTGA 23057 28 100.0 33 ............................ CGTTAACAAATATATGCGGACTATTCGGCTCAT 23118 28 100.0 33 ............................ CGAACCATATACCATTCAAGAGGAGCATTATTT 23179 28 100.0 33 ............................ TCATAATACCTTTTGAATCAAAATGCAAGACTT 23240 28 100.0 33 ............................ GGGGTGGCAATTACAGCGCGAGCCTGGGGTCGA 23301 28 100.0 33 ............................ TAATACTTGATCGTGTCAATACTAATTTGATCT 23362 28 96.4 33 ......T..................... TATTATGTTAGATTTAGAAATTACTAAAAAATT 23423 28 100.0 33 ............................ TAAGAAGCACAAGAAATTATCGACCGCTCTGGT 23484 28 100.0 33 ............................ TGTAGGTTCTTGCAATTTGACCATCAAATTTTT 23545 28 100.0 33 ............................ CCACGCCTTTGTAATCGGGGCTGGACAGGTCAG 23606 28 100.0 33 ............................ TAGGTGTTTAGACCGTCAACCGTTACTTGCGCA 23667 28 100.0 33 ............................ TACAGCTTAGATCTGGAAGGTAGTAAAATGATG 23728 28 100.0 33 ............................ TACGTTGTGAAGCTGAGCGACGGAACTTACTTG 23789 28 100.0 33 ............................ CGATTGAAGAGAAAAAATAATTTTTTAAAAATC 23850 28 100.0 33 ............................ CTTGTCGGGTCTACCAATGACGTAGCCCATAAA 23911 28 100.0 33 ............................ CATCTCTGAAGCGAATGGGGCTTTAAAGGCGTT 23972 28 100.0 33 ............................ TTTTGATTACCCGTCATAGCAACGGCGTATTCA 24033 28 100.0 33 ............................ CCTCGGATTATAAGAAATCACGGTCTTGGAAGC 24094 28 100.0 33 ............................ TTGCCACCCCGGTCTATATACTTCGTATTCTTG 24155 28 100.0 33 ............................ CAAAAAAGACCTTTGAATCCTTGATATATAAGA 24216 28 100.0 33 ............................ TCCAGTTCGGTGAGTTTCAGACGGTGACGCGGA 24277 28 100.0 33 ............................ TTGGGACATCTACCCGGACTCTGATGCTAATAG 24338 28 100.0 33 ............................ TATCTTTTCTGTTTCTTCTAGTAGTCATTTTTA 24399 28 100.0 33 ............................ TCAGTAGCGCTCTTTATCAGCTTGGCAGTGTTC 24460 28 100.0 33 ............................ TTGCGACCACCGTCTCTCAACGTGCTGGTAATT 24521 28 100.0 33 ............................ CAGAAAGTTATTCACGCTGGTATGATACCGTTT 24582 28 100.0 33 ............................ TACTTAAATTGTTGGTCAAGTGAATTAAGATTA 24643 28 100.0 33 ............................ TAAAAAAGAGGAGACCCTAAGGCCTCCCCAAAA 24704 28 100.0 33 ............................ CTGAATTGGGGTGGTCATTATAAATTGGAAAGA 24765 28 100.0 33 ............................ TAACTGTATCGGCATAGTAGCTGTGGATGCCCC 24826 28 100.0 33 ............................ TGATGTCAATCCAGAAGATCCGCAGTACCATAT 24887 28 100.0 33 ............................ CCCCGATAAATTTTTTAAGTAAAAAGTAGTTGA 24948 28 100.0 33 ............................ TGATGTCAAGCGGACTAGCCATGTCACTAACCG 25009 28 100.0 33 ............................ TCTCTGGAATTGAGTCAAGCGTTGCATACACCA 25070 28 96.4 33 .....................A...... CGATCCGTACGACAGCAACTCCCGATTACACAA 25131 28 100.0 33 ............................ TGTTGAAGTAGTGCCGTCTGGGAAAGTAACCTT 25192 28 100.0 33 ............................ TGCGTTGAAAATTGCCTGAACGGTGCTGGTGCC 25253 28 100.0 33 ............................ CAGACGGCTAATGGTCTGACTAGCACGGTAAGC 25314 28 100.0 33 ............................ TTAAACCATTCTTGCGGCGGGGGTGCTTGATAG 25375 28 100.0 33 ............................ TTATTGCTGAAACCAGGCCACCAGGAGCTCATG 25436 28 100.0 33 ............................ CAACAACATTGGCGATTTGCTTAGTCTGTTGGT 25497 28 100.0 33 ............................ TTGATTCTATTTTACGAAGTGAAGCTAGTGTTT 25558 28 100.0 33 ............................ GGAGATACCAAAAGCAGAAGCCAATTGGTACCG 25619 28 100.0 33 ............................ TTTATGGGGCGGTAGAAACTGCTTGGAAAGAGG 25680 28 100.0 33 ............................ TAAGACTTATACTGTAGTGCTTTCAGACGGGAG 25741 28 100.0 33 ............................ CATTATTAGTAAGATTGACCGCTCAAAAATAAG 25802 28 100.0 33 ............................ CTGAAATACGTTTGAATGCGTTTGATGATGGTA 25863 28 100.0 33 ............................ TGGGAAGTTGCTGGCAAGCTTTAATTGTCACGA 25924 28 100.0 33 ............................ TAAAAAACTCGTGAAAGCGTCCAATGCCTTCAC 25985 28 100.0 33 ............................ TACTTATAATTATAACGGTTATCTTGACAACTA 26046 28 100.0 33 ............................ CGGTTGAGCTGATGACCGAAGCAAATGTTTACG 26107 28 100.0 33 ............................ CGGTTGAGCTGATGACCGAAGCAAATGTTTACG 26168 28 100.0 33 ............................ TATAACCAAACTCATTTAAGGCCGTTGCTTCAA 26229 28 100.0 33 ............................ TGCGAGTTTGCGGATCGCTTTGAGTACTGGAAG 26290 28 96.4 33 A........................... TTAGGCTTCTTGGATGAAAAACTGGTCAGTGAG 26351 28 100.0 33 ............................ TGCGAGTTTGCGGATCGCTTTGAGTACTGGAAG 26412 28 92.9 33 A....A...................... TTAGGCTTCTTGGATGAAAAACTGGTCAGTGAG 26473 28 100.0 33 ............................ CATCCATTATCACCCGTTTTTTGTAACCGCCTA 26534 28 100.0 33 ............................ TGGGACTAGACAATGTGCTGAACATGGAGCAGG 26595 28 100.0 33 ............................ CTTATACTAATGCTTCTGCTTCATCTTTCCATT 26656 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 26717 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================= ================== 85 28 99.5 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGCTCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //