Array 1 113750-117724 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCD01000006.1 Chryseobacterium carnipullorum strain DSM 25581, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 113750 47 100.0 30 ............................................... CTATATTCATACTGACTACCGAGATAACGC 113827 47 100.0 30 ............................................... ACAGAGACCCTGAGCTAAAGGACATGTTAA 113904 47 100.0 30 ............................................... CTTTTTCGTGACAGTTAGGGTATTGCGATC 113981 47 100.0 30 ............................................... TGCGATGCTATCATACTGCCTGACACCCTT 114058 47 100.0 30 ............................................... AATTAGTTTACATGGGAATGAATCAGACTT 114135 47 100.0 30 ............................................... GAAGGGGAAAATGAAGGCCCTTCACCAGCT 114212 47 100.0 30 ............................................... ATTAGAAAGATCATAGCTTCGTAAGTCCTT 114289 47 100.0 30 ............................................... TTACCAGAAAAACAGCTATTTACATTTGCT 114366 47 100.0 30 ............................................... GTGATCTGGGAACGCGTGTGAATGACATTG 114443 47 100.0 30 ............................................... ATCCTCCTTCGTCAGAATGAAAGCAGTTTT 114520 47 100.0 30 ............................................... GTCAAGATAGTACATCGTTTCACGTTGACG 114597 47 100.0 30 ............................................... CAAGGCGTTCGGCGAAGGTGCACTGGAATT 114674 47 100.0 30 ............................................... GGAAGTTATTATCGAAGGGCATCTTTTTCA 114751 47 100.0 30 ............................................... TATATGATGGTGCCTTTAGGCTGACTTTAC 114828 47 100.0 30 ............................................... GGAAGATGACAACAGAATATGTATTTGTAT 114905 47 100.0 30 ............................................... TATTATAGCACACATCAATTTTATATGTCA 114982 47 100.0 30 ............................................... GAAAGCGAAGATGAACTATTTGCGTTTTCA 115059 47 100.0 30 ............................................... CTTCTTCGATGTGGTGCCTCATAAATGTTA 115136 47 100.0 30 ............................................... TGAATGCTGTTACTCCAAACTTTGGTGCAG 115213 47 100.0 30 ............................................... TTCCAGAGATTTTTTTAACTCTTTTATACT 115290 47 100.0 30 ............................................... ACTATGACTCTGGTTTATGGCATCACGCTG 115367 47 100.0 30 ............................................... GGAAGATGACAACAGAATATGTATTTGTAT 115444 47 100.0 30 ............................................... AAGGTCACTCTTAAGACCTTCTAATTGTTC 115521 47 100.0 30 ............................................... ACCTTTTCTCTACATTTGTACTTTGACCAA 115598 47 100.0 30 ............................................... TTATCCAATATGGATGATGATTTATTTGTT 115675 47 100.0 30 ............................................... GTGTATTCCAGTATACAAACAATCAACCGA 115752 47 100.0 30 ............................................... CGGTAAAACCATAAAAGATGGTAGAGGTTT 115829 47 100.0 31 ............................................... CGGGAGGCTTTTTTAATACCCTTCAATTCTG 115907 47 100.0 30 ............................................... TCCAAAGTGGGGATTATAATCCTTTCCGAA 115984 47 100.0 30 ............................................... ATTTGAAAATGAGTTAAGAATATACGTTCC 116061 47 100.0 30 ............................................... AACATGGGTCTTGTCTTTTGTAAGAAAGAA 116138 47 100.0 30 ............................................... CTTCTTACAATCAACTTATGAGTGAGTTAA 116215 47 100.0 30 ............................................... ATTCCGATGATATACCAATTGATTTTGAAG 116292 47 100.0 30 ............................................... TCGACTGGATTTTAGAACCCAGAAATTTCA 116369 47 100.0 30 ............................................... TTTTCAATTATTAATACACGTAGAGAATTA 116446 47 100.0 30 ............................................... TCAATGAAACATCGGCTTGATACTGATCAT 116523 47 100.0 30 ............................................... TTCCAGGAGTAACTCCTGATTTCGTTAAGT 116600 47 100.0 30 ............................................... GTTAGGGTTTCGGAGTACAATAATCTTGTC 116677 47 100.0 30 ............................................... CCCTCAATTAAGAAGGCTTTTTTTGTAATA 116754 47 100.0 30 ............................................... CGGTGTTCTGTGCAAGCATTATCACACATG 116831 47 100.0 30 ............................................... TAAAAAAGATTATATCTTTACACCGTAATA 116908 47 100.0 30 ............................................... GGTTGTGAGTCTCATTTTTAGCAACCATAC 116985 47 100.0 30 ............................................... GGTGTTTGGATTAAACCAATTGATTCAGAT 117062 47 100.0 30 ............................................... TTTTTTATAATCAGCGTTTTCTTTGATGGT 117139 47 100.0 30 ............................................... CTTCTCTGGTATTTGAAGCAAATAGAAAAA 117216 47 100.0 30 ............................................... ATTAGAACTGACAAGAAAAATAGAAAAGCT 117293 47 100.0 30 ............................................... ATGAAGTCAAGTATTCTGAGTGGAATGTTT 117370 47 100.0 30 ............................................... GAAAGACTGGAAAGCAGCAGTTCGCACATG 117447 47 100.0 30 ............................................... CATCCAGTTACCGAACCCAAGTAAACACAT 117524 47 100.0 30 ............................................... CATCAGTTGGATATTCAATCATTATCGAAG 117601 47 100.0 30 ............................................... ACACCGGAAACACACCCGAAAGGGCTTTAT 117678 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 52 47 100.0 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : AGGAGCCATTCCACCTTTGTGAAAAGCTTTCCAGTTTACTACAGAAGCAGCAACATCAACTGGCAATACTTCACCCTTACTCTCAGCTACTGTCTGCTCCGTAGCGGTAGATGCAGTTCCTGCTGATTTGTCTTTATTACAAGATGCTGCAAGCAATCCTACTCCTACTAATGCAATTACACTAAGTTTTTTCATATTATTTATTGTTTTAAAAAATTTAATTAAAATACTAAATTTCAGGATTCAAAAATATAAAAACCTACCCACTTATCACCTTACCATACATCAAGAAATAGAATTTTTAATATTTCGTGCCCATCACAAAAATATGAAATCCTGCGAAAAAGGAGATTCTAAGGTACTTAAAACCACATAAAATTGGCTATTTTAGCTGTTTGGATCTATCATAACTCTATGGATAACCATATAAATTTAGGCGCAGAGTAAGAGGGAGATTTATTTTACACAGCAGATTGCTGACGAAGTAAACGACAAAATCG # Right flank : CCTCAAAAAACAATCTACTGAAAATCAGTAGATTGTTTTTGTTTTTAGGATTTAAAATTTAGAATAATTCAAGCTGTTGGAAGGTTGGAGGTGGCTCTTCTTTATTTCTGGCAAAGAAAATTTCAATATCGCCAAATTGCTTATCCGTAATACACATAATGGCCACTTTTCCTGCTTTTGGCAACATGAATTTTAGTCTTTTAATATGAACCTCAGCATTTTCACGACTTGGACAATGGCGGACATACATCGAAAACTGAAACAATGTAAATCCATCATCGATTAAAGCCTTCCGAAAGCGATTCGCATCCTTCATGTTAGCTTTAGTCTCGGTCGGTAAATCATATAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCATTCATATCAGTTCAGGATAAGAAATAAGACGTTTTTCTCCGGTATAGCATTTATAAAGCGAAGTGACCGTTGTTTTTATAGCGACCAATAATGGTCTTATTTTGTCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //