Array 1 772206-777924 **** Predicted by CRISPRDetect 2.4 *** >NC_014160.1 Thermosphaera aggregans DSM 11486, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =================================================== ================== 772206 24 100.0 42 ........................ CAGGGAATTCTTTAAAGCTTTAGAAGCGCAAAAAGTCGAGGA 772272 24 100.0 37 ........................ GTTGATGGCTTAACAACAATTGGTTTTGGCGGTGTGA 772333 24 100.0 45 ........................ ATATATGTAGTATCGGTAAGTGCTAGTGCTGTATCAGCAAATAAA 772402 24 100.0 42 ........................ CGTATTACTAATACGCCTTTTCTGCCCTCATCGGTTTCGGTT 772468 24 100.0 40 ........................ ACACTTAGTCGTGAAAAATCCAAGCCGAAAGAATACCCTG 772532 24 100.0 38 ........................ CGCTATACTCCATCACATACAAGTTGTCCTCGCCCCGG 772594 24 100.0 44 ........................ GTGTTAATAAAGCAACCCTACACCGCATACGCTATAATCGTGAA 772662 24 100.0 38 ........................ TATATTGCTCGCGCAATTCTTTAAGCTCTTTTCTCAAA 772724 24 100.0 39 ........................ ATCGCAGCAACGCTATCGAGCCTATGTGTTGATTCGTTG 772787 24 100.0 39 ........................ ACGTTTGAATCCGCGATGGAAACATCGGCTTTAGTAAGA 772850 24 100.0 39 ........................ ACCGCGAGGAGCGGGGCGAGAAATTATTGTTTCCTGTTG 772913 24 100.0 43 ........................ CGTGTAAGGTTGCTAACGCTTGATAAGCTAACACCGTTCACCG 772980 24 100.0 39 ........................ CTACGGGTTCGAGCTTAAAAAAGCCGTTTTCGAGAGCGA 773043 24 100.0 42 ........................ TTGAGGCTCTCAGCTAGCTGGGGTATCAGCGATTTGAACACT 773109 24 100.0 42 ........................ ATTTCTACATTTCATAATTGAGGTGTAATATATGTCCCAGAC 773175 24 100.0 40 ........................ CGAACAAATTAATCATTAGTAATGGCAAAATGATATACGA 773239 24 100.0 41 ........................ TATTGTTAAATGGTGTTTATTTGCTGATACAGCACTAGCAC 773304 24 100.0 43 ........................ TCGCAGGGTCAAATGTGGTTATAGCGGACATTTATATCACCCC 773371 24 100.0 42 ........................ TGTGCTTTACACGGCTGATGAACCGCCTCATTACCCAATTGA 773437 24 100.0 41 ........................ ATGGAGCTAGAGCTCATAAAGCTAATTATCCTATTTCTAAT 773502 24 100.0 41 ........................ TCATAGTTGAATATGACTCATACAGCGTTAATGCGTCGTCA 773567 24 100.0 40 ........................ TACCATAAGCTTTTTTCATTAGTGATTTACAATGACGGCG 773631 24 100.0 51 ........................ AAAATTGAAAGTATTTCACACTCCTCCAGGGGTGCATTTACACACCCCCTT 773706 24 100.0 40 ........................ AGACAAGACTTCACGATTGGAGTAATAAACGATGTAGTAT 773770 24 100.0 43 ........................ CTAGTCCCATATGTAAGGTCTAATATGCGTATTGGTGGCTTGA 773837 24 100.0 39 ........................ TATCCATATTGTTCCGAATGACCTATTCATTTGTGCATT 773900 24 100.0 41 ........................ TGGGACAGTGCCACTACGCATATGGCTGTGAGCCCAACTAT 773965 24 100.0 39 ........................ AATAAGGAAATGAAGGAAGCGTTTGCGAAAAAGCTAAGA 774028 24 100.0 42 ........................ GAGGATTGGATTCCTGGTAACTTGTGTGAGCCAATACTACGT 774094 24 100.0 43 ........................ CACAACTCAAACTCAAATTAGCTATTACGAATTCGCAAATAAG 774161 24 100.0 41 ........................ CACAAGCATATACAACTTGCTCGACACAATGGATAAGTATG 774226 24 100.0 41 ........................ CCGAACCCGTCGTGCTGGGTAGTGTAAAAGTTTACGAGCCT 774291 24 100.0 43 ........................ TGTATTATATCCAATATTCCGTATATTCTAGCACTCATTGCAT 774358 24 100.0 41 ........................ AAGATAAAAGTGAGCATTGTGAAAATAGGGAGTGGAAAAGC 774423 24 100.0 41 ........................ CTCATTACCGCGCAATTGTTCAAGCTTATTTGCGAATTCGT 774488 24 100.0 46 ........................ TCACGGCAAAGCCCTGGAAAACGTACGGCAGCATCGTGGCTACTGC 774558 24 100.0 40 ........................ TCGCCTTCGACTTCACATCCCTCATCAACATGATAACGCA 774622 24 100.0 41 ........................ TTAACCGTTTTTCTTCCCCTGTTCGCCACAGTTGGATTTTT 774687 24 100.0 44 ........................ CTAAAAACATTAAGCCCAATGGGGATTAAAGGTAAAAGCAGGCT 774755 24 100.0 41 ........................ TATATTCGCGTGAGTTTAAAGCGAAATGGCGAGATAGTTGT 774820 24 100.0 41 ........................ TGAGGATAGGGATTGTCTGGGAGTGCCCGTGGACTCCCAGT 774885 24 100.0 44 ........................ TTTGATACGGTAAACAAAATACAACATGATTAGTAAGATAAATA 774953 24 100.0 39 ........................ TTAATTTTACCGGTACGGGATAATTTTTCATCACAAAGG 775016 24 100.0 37 ........................ TTTTTAATCAATTGGGAAGCGTTAATAGCTCTTACCA 775077 24 100.0 42 ........................ AGACTTGAGACCCAGGGACATGAGACCCCACCGAGAAACATA 775143 24 100.0 38 ........................ TAATAAACGCTCACGGGTGAAACGCTTAGTGCATGTAG 775205 24 100.0 48 ........................ CTTGAAAACCGTCACCTGGCTGGTGTAGTCCTCGATGACAAACTTTCT 775277 24 100.0 43 ........................ CTACAACATTGTTTAGACTAATACCTTTATGCTCAGCTAATTG 775344 24 100.0 36 ........................ TTGTATCGATAGCTATTAACATGGGCTTGTCGCTTA 775404 24 100.0 42 ........................ AGCCCAGCCCCGAAGCTCAGCCTTTTTTTCAAGCCCTTTCCT 775470 24 100.0 39 ........................ TGTGCCCCTCCGTAGTGATTGCTACTTTCTGCTGTGTTA 775533 24 100.0 38 ........................ CAGCACATTGGATATGGTATAAACCTCTATTATAAGTG 775595 24 100.0 42 ........................ AGAGTGGATTGTGAACAAGGGGACTGTGAGCGAGGAGGAGAA 775661 24 100.0 40 ........................ TTCTTACATTCTTACGCGGAATTTTCCGCGTGTAAGAATG 775725 24 100.0 42 ........................ GTCTCGCGTGCTAGCAGGTTGAGTGCGGTCGGGGTTTTAGTC 775791 24 100.0 42 ........................ ATAACGTTGAGTTGCTGTTCAACGTGCCCAGGGATAAGCTCA 775857 24 100.0 40 ........................ GACGCCCTAGCCTTCGCGATCCCCTGCTTCGTCCTCTCGC 775921 24 100.0 27 ........................ AGAAATACAAGCGATATAAGATAAAAG Deletion [775972] 775972 24 100.0 37 ........................ AGTAGGAAGCCGTCGGGGCTTCTTGTTTTATCGTAAA 776033 24 100.0 39 ........................ AGGGCCACGCCAAGGACAGCTAAGAGCGGTATAAGCTTC 776096 24 100.0 38 ........................ CTTAAAAACGGTCCTCCAAACCCCCCGGTAACGCCCCA 776158 24 100.0 46 ........................ CTTAGTGCTTACTGAAACATATGACAACTATGTGAACAGTAAGAAT 776228 24 100.0 41 ........................ AGCCAGCACGAGTTAAGCGTCCACGTCTCGTTTGTTTTGTT 776293 24 100.0 40 ........................ CTAACGCCAATACCTCTTCAACCATAGCCCACTGTGGCAG 776357 24 100.0 39 ........................ TTTTTTAACAACGCTAAAACATCACTGTCAATCATAATG 776420 24 100.0 44 ........................ TTATGCTGGTTTTGAAGAAATTGGTTGAGTCAACCAGGTAAATT 776488 24 100.0 39 ........................ ACTTACTTATGTTAAAATCGTAGATATCTTGAAAACGCT 776551 24 100.0 42 ........................ AGACAGCGCTAGAGAATGGTCATGTTAAGAAGCTAGGGTTTA 776617 24 100.0 43 ........................ TCGAAATACCATGTGTAAAGATGGGGTGCTATAGTGTCGCCGG 776684 24 100.0 39 ........................ ATTTGATAACTTGTAATGTAGTCATTTACTCCTAGATAG 776747 24 100.0 40 ........................ AATATGGTTGTTTTCAAGCGCTATAGCAAGCTCGGGGGTT 776811 24 100.0 38 ........................ CGCGGAAACGCAGCAGTTTAAAATCCGAACCAATCGGT 776873 24 100.0 44 ........................ AATATGTAAAGGAGAAAATCCTGTATTATGAGAAAAACGGGAAT 776941 24 100.0 44 ........................ ATTCAGCGTGTCAATGCTAGTGTCCTTATAGAAGTTGAACACCT 777009 24 100.0 41 ........................ CAATCTATATGATGTGCCATTCCATATTATTAAATGGTGTT 777074 24 100.0 41 ........................ TTAATAAGGATATTAGAAAAACCCAAAAAGCGAAAAATATA 777139 24 100.0 37 ........................ GGGTTTACAGGCTCACGGGCCTCGGTGAATACTATGT 777200 24 100.0 41 ........................ TATGGAAACATATCCCGCATAGAAGATTCGAGAAAATGGCT 777265 24 100.0 39 ........................ AAGCAAAAACCAAACCCACAGGTTAACTCCCCAAACCAG 777328 24 100.0 40 ........................ CCAGTATTACATTCACGGAAGACTTCACGGTCTGCACTAA 777392 24 100.0 39 ........................ GTATAAAATGATATTTGAGAAATGCTATAGGGATAAAAC 777455 24 100.0 41 ........................ ACCATTGCCAAGCCAATCGTCATGTTCAACAAGCTCGACAG 777520 24 100.0 38 ........................ TGTGCAACGTTGAACGGGTTGACGTAGTCGCTTAGCAT 777582 24 100.0 40 ........................ CCTCCCACGGGGCCAGAGGACCCTCCTATTAAACTATGGT 777646 24 100.0 41 ........................ GTTGACAGGGCGGTTGTCAGGCTTGGCGATGCTAATATTGA 777711 24 100.0 40 ........................ GCGTTTATCGCTTAACCGCTCTAGGCGAATACTACGTTAA 777775 24 100.0 39 ........................ ATCGTTTCCCAGAGGGTCAATCCTACCTACCCATGCATT 777838 23 95.8 40 ............-........... TTCATATCCGTATGCGTATTGTGGATTGAGCTTCCTAACC 777901 24 95.8 0 ..........G............. | ========== ====== ====== ====== ======================== =================================================== ================== 89 24 99.9 41 GAAACAATAGAGAAAAATTGAAAG # Left flank : TCAGCCATATGTCTCTTCTCGTCTCGCAGTATTTTGACGCTATTTCGCTTACTCCCAGGTTTAGGTATGCCCTGGGTTTTAAGGGGAGCCGGTCCCAGCTCCACCCTCTCAGCTCCGGGTCGACGGGGTCCGCTCTCGCGAGCTCGTAGAGCCTTCTAATGCTGCGGAACATGACCCTGCGGAGGATCAAGGCCTCCACCAGCCACTGGCTTGTCTCCAACCCTATTAAAACCCCCTCATCATCAGCCCCGGAAAATCCCGGGAAAGCCCGGGAACCCGTTGAAAAACCCCCGCGAACCCTCCTGATCACGGCCGCGGAAAACCCCAGCCCGCCCCGGGAAAAACGAGAAAATCCCGGAAAACCCCGGGAACCCAGCCACCCAGCCAGCCCACGATCACTGATCAACCCCCCAACACCATCACGCGCAGACCCCGATCAAAAAGCAAAACATTAAATACCAGTAGCAAACCTAAAATAAACAATGAAACAAGCAAAAACG # Right flank : GACTATTCTTTTGTCTTGATGGATTGGAACGATGGGGGGTGGGTGGTTTTCGGCTGGGATTTGGGCTGTTTCTCGGCGGGTTTGATGGTGGGGGTTGAAGGCTGGTTTAACGTGTTCCCTGCTGTTTCTGATCCTGGGGCGGGGTGGGGTTGCGGCGGGCTGTGGGAGGTTTTTAAGGCGTGCCCCTCTTTATAAACCATGGCTTACTATAGCAGGGGTTTAGATTGCTTGTCGCACACTTCGCTGACACACACCTCGGGAGAATCCTTTACGGCATCCGCGAGACGGAGGAGCAGATCATAAATCATTTCGAACAAGCCGTTGACCAAGCGCTCGCGGAGCACGTTGACGCGTTCATCTTCGCCGGAGACTTCCTCGACGAGAGAAAACCCCCCATCAGAGTGTTGAAAAAAGCTATTGAAATAGTTGAGAAGATAACCGGGAAGGGAGTAGCAGTCTTCATGGTCCCAGGCGAGCACGACAGGTGGACGAGGGGAGAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACAATAGAGAAAAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //