Array 1 325969-325660 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCJS010000002.1 Bradyrhizobium liaoningense strain SZCCT0400 NODE_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================= ================== 325968 24 91.7 33 ....G................C.. CATACCCTGTCTTTCTTCGGTAGCAGCACGGCT 325911 24 87.5 33 ....G......T....T....... GATACCCTGGGATTCTTCAGCACCAGCACGGCG 325854 24 100.0 33 ........................ AACGAGCTGGACTTCAGCGACGCCAACACGGCA 325797 24 100.0 33 ........................ GGAACTCTGTATTTCCTTGGCACCAGCACGGCC 325740 24 91.7 33 ....G..................T TCCGTCCTCCAGTTCCGGTACAGCAGCACGGCC 325683 24 79.2 0 ..A.G.......C.T.T....... | ========== ====== ====== ====== ======================== ================================= ================== 6 24 91.7 33 GGCAACGCCACCATCACCAACAAC # Left flank : CATATAGCGGAAGTCTGCCGAAATTGCCCGAAAATCGGGTCTGAAACGCAAATATCAGAAACTTTCAGAAACTAGCCAACCCCTTATCAGGACACCACTCCCTGCCGATGAGATGAATCCAGCCGAGGACTCGGGACGTGTTGGGGGACGTAGTGAAGACGGGGAAAGATTGTTTCAAGGCGACCCGCCACCTGCGGGCCGCGCTGCTGACGTCGTCGGCGCTGGCCTTGGCCTGGATGCTGCCGGCCGCGCCCTCGCACGGCTCGTCGAATGGCACCTGGCTCGCCTCCCCCGGCAGCAACGACTATGGCACCGCCTCCAACTGGGACGGCGGCTTCGTGCCGGTGGGCACGGCCTCCTTCGGCACCTCGGACACCACCAGCCTTGCGGTTTCAAGCGTCAGCGTCGGCGGCTGGACCTTCAATGCGGGCGCCTCGAACTACACGTTTGACGTCAACGGTCCGTTGACCTTCACGGGTGCCGGCATCACCGTCAACGGC # Right flank : GCCGGAGGCACCGTCGATTTCTCGAACAGCACCGGTCCGAACGGCGACGGCAGGCTGAGCGCGGGATCGATCGCCGGGGCCGGCAGCTACGTCCTCGGCGCCAACGAGCTGACGGTCGGCTCCAACAATTCCTCGACCGAGGTCAGCGGCGTCATCTCAGGCACGGGTGGCTCGCTGGTCAAGATCGGCACCGGCACGCTGACCCTGTCGGGCGCCAATACCTATACCGGCGGCACCACCATCAACGGCGGCACGTTACAGCTCGGCAGTGCCGGCGGCGTCGGCTCCATTCTGGGAACCGTCAACGTTGGCGCCAGCGGCACGTTCGACGTCGTCAACGCCGACACCAGCGGCATCACCAGCATCTCCAACGACGGAACCACGAACTTCCAAAACGCGAGCAGCGCCGGCTCCGCGACCATCTCAAACAACGGCTCGATATACTTCTACGACACCAGCACCGCCGGGACCGCCACCATCACCAACAGCAGCAGCGGCAC # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCAACGCCACCATCACCAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //