Array 1 64915-67350 **** Predicted by CRISPRDetect 2.4 *** >NZ_WRXO01000017.1 Chitinophaga oryziterrae strain JCM 16595 NODE_17_length_71719_cov_21.303819, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================== ================== 64915 37 100.0 36 ..................................... AACCTGACATCTGTCAATAGAGGTATATTAAAGTAT 64988 37 100.0 37 ..................................... TTGATTATCGCCGATGAGGCGCACATAGGCACTATGA 65062 37 100.0 36 ..................................... CCCTTAGCCATGCCTCCCATACCAGGGGTCCATCCT 65135 37 100.0 36 ..................................... CTATTTCAAGTGCTGTGACTGGGTTTTTGTCTGCCA 65208 37 100.0 36 ..................................... AAGAACTCGTATAGATATCGCTTACACAGTTCCGCT 65281 37 100.0 36 ..................................... CCGGGAAGGGCTGTTTCAGCATACCACGGGGGCTAA 65354 37 100.0 36 ..................................... AATGGTATCAATATGTAGGATCTACGATAGTAACTA 65427 37 100.0 36 ..................................... CAAAATTACGTGAAGGAATAATATTGAATAGACATA 65500 37 100.0 36 ..................................... TGCATGTTCTTAGATGCTCTTTTATCCCAATACACT 65573 37 100.0 38 ..................................... ATTAGAGGTATGGACCATCAATCACTATTTGATTTTGA 65648 37 100.0 36 ..................................... CTATGGGTGATGGAGCCGGAGCTGTGCAATATGCGT 65721 37 100.0 36 ..................................... TCAACATAATCGGCATAATCCAGCATGAATATTTCC 65794 37 100.0 36 ..................................... AACAGCTCAATGTCTTTGTATCTGAGAGCTTCAATC 65867 37 100.0 36 ..................................... TCAGTAAGAAATCAAACCTTAGATAGCACTATTCAT 65940 37 100.0 36 ..................................... TAATTTGACCGTCTATAAAATGACGCACAACTGTAT 66013 37 100.0 36 ..................................... ATCTATCATCATCCAAATACCCAACGCCTAATGCAC 66086 37 100.0 38 ..................................... TATCTTCAGTATAATTTATTAATGAATCACGATATTCA 66161 37 100.0 36 ..................................... TGTAATTTGGTCTTACCTCATGTGGTGATTGTGAGA 66234 37 100.0 37 ..................................... TTCAGATGCTTCGGTTGGGGGCATCTGATGACAGACC 66308 37 100.0 36 ..................................... AAATTTCTTCATGTTCTTCTGTGAATTCAGGCATAT 66381 37 100.0 36 ..................................... AAATACTTTGTTCTTTATCCTTATCCATATCCTTAC 66454 37 100.0 36 ..................................... GATACTTTTATTACATTAGGTGAAGGCTTAGGGTAT 66527 37 100.0 36 ..................................... GATCAACTGGATGTTGCTTACCATATTGAAACGTCC 66600 37 100.0 36 ..................................... GCCCTTGCAGCCTCATTTTCTTCCAAATCCTTTATG 66673 37 100.0 36 ..................................... AAGTTTGAAGAAATTGCACTGGACGGAAATATCAAA 66746 37 100.0 37 ..................................... CTGCAGGCAAGTACAGCAAGCGCACAAGATTGTTTGA 66820 37 100.0 36 ..................................... ATGAATCCCTTCGAGTACACACGTTGATAAGCAGTA 66893 37 100.0 36 ..................................... GAATCCCTGCAACAACTGAACGCCATTGATGGTATT 66966 37 100.0 36 ..................................... TACGATCAATTAATAGAACCATGGCATTTCGGTGGC 67039 37 100.0 94 ..................................... TACCAATCTTACGGGACTGATAAGTGATTAACCCCACCAAGAGAAGAAGGATTGAAACATAGTTTCGTCGGTGTAGGCACTGATGTTAAAGTGT 67170 36 86.5 36 ......-...A.......AG.G............... GTTCGAAATTGATCAGATTGTCTAGCCATTCAAAGA T [67180] 67243 36 78.4 34 ......GGGTA.......-.G..........C..... TCAATGAAACCAGCCGTATATCTACTGCCCCGTA G [67265] 67314 36 83.8 0 .......-..A....A.....G..A.......A.... | T [67324] ========== ====== ====== ====== ===================================== ============================================================================================== ================== 33 37 98.4 38 CTTCCTACAGGTAATCCAGAATAAGAAGGATTGAAAC # Left flank : CTCCTTTAGATTATAAATTTGCTGTTTATGAAGATCAGGTATTTGAAACATATAAAACACAGCTTTTTTGTTATGCCTGGTTGATTGAAGATAATTTCAATACTATTGTTAAGAAAGGGTTTTTAGTCTATACGAGAAGTAAGAATAAACTGGTTGAAATTCCCGTAACAGATGCGGATAAGCATGCTGTTAAAGAATGTGCACACGAGATCATCAGAATTATTGATACCAACTTTTATCCTAAAGCGACGAAATATAAGCAGCGATGTATTGATTGTACTTATAGGAATATTTGTACGAAGTAATATTTTTCCGGGTAGGAATTTATTTTCTTGGCTACATTTCACTCTTCTAAATTATTGATATACAATTATTTGAGCTTTCGGAAAATGGGTTAAATGTATTGTTTAAGCTCTTTGAAATATTGGTTTAATTAAAAAATGAGTACTTTGTAAAGTAGGTTGGTATGTTGGGAATCATTAATTTAGGAGAGGGGACGG # Right flank : CATCGTTTTCAGACAACGGTAGATAAAGCTTTGGCAGCAAAAGAATTTAACAAAAAAGGCAGCATAAAATGCAATGTTGAAATCGTGTCGTGTAAGGAGATACCCGAACTAAGTGTAGTGGTCTATTTGACGTTGGCAATTCAGAGAAAATTGTTAACCGGGGAAAGTGGCTATTTTGATACACTATAGTCTAAATATGATACAGTGTTAAACTTGTACGACAATGAAGAAAAATAAAAAACTATAAAATCCTTTTGCCCCAGTGCCAGTAATGGCAACACCCATCATGGAATGAGATATGCAGACTCAAAACTCTTTAGCACTTAAACGATACGTAAAACAATCATTATTTCAACCTCACTCGTTATAACCCTCTATACTTTGTAATTGTTCCTCAATATAATACCTAAACCCCGGGTATCTTTGATCCCCGGGCAGCCAGTATGCGAAAAAAAAAGTCTGCCATGAAGTTATATTTCCAACCGTTGTCGGAATCAACC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTACAGGTAATCCAGAATAAGAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //