Array 1 11109-10491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAICEA010000048.1 Clostridium estertheticum strain CF008 contig00048, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11108 37 100.0 35 ..................................... TACTATTATAAGCTAGGAAATACAGACATAAGAGC 11036 37 100.0 36 ..................................... TTTAATTATAGTTCTTTATACACATGGAAAGCATAT 10963 37 100.0 37 ..................................... AACAAAGTAACTTCATCTTGCGCATCTAAAAGAGAAG 10889 37 100.0 35 ..................................... TTAAATGGTGTATTTAGTAATATAAGTGCTATTTC 10817 37 100.0 36 ..................................... TAATGTGAATTGGACTCTTACACTATTCTTGCTTAA 10744 37 100.0 35 ..................................... GGATTTGATACTCAAGATAAAGCAATATTGATTCC 10672 37 100.0 36 ..................................... TGATACATCCAATAGTGTGACCAAAAGTTATTGCTA 10599 37 97.3 35 .............A....................... GCTATTGTCTGCTTTGACTGTGTATTTTCTGTTTG 10527 37 97.3 0 ...........T......................... | ========== ====== ====== ====== ===================================== ===================================== ================== 9 37 99.4 36 ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Left flank : CTCCAATGGAGATTGAAACTCTGCTACTGGTGCCGTTGTTTCTGTAGTGGCTG # Right flank : AATGAAATCATTTTTGGGTGTCTTTCATACCTTATTACTCTGAGTCAATATTATTTTTGGTTACAATATAGGTCTGGGGATTTTTCAAATGGCATTACTTGTTTTATAATCTGAACTTCGAGGTAAATAACAAAAGATCTAATAGCTATACTGAATTTTATAGCATACTAAACTATATTTATGAAAACTTGATGAAAGCTATTAATATAGTTTTATTAAAACCTCATCATGAGCTGATAAAAGGTAGCAGAGTATGTAAATACCAAAGCTTAAAGAACACAAGTATGGATACTATAAAGTGGCTTGAGAAAAGACCTCATTTATTAGGGCATATAGATGGTAGAAACATTCCAACTCAGGCTTTACAGGTAACTAAAAAGGTAACATTAGGCATTAAGGAAAATAGATTCCTAAAGTTTATGCTAATAACTATAATGCACAAGATAGATAGTTTTATAAGAACTTATACATCAACACCTTGGAAAAAGAATGAGGATATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 203363-205960 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAICEA010000006.1 Clostridium estertheticum strain CF008 contig00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 203363 36 100.0 37 .................................... TTTTGAATGGTATGTGCATAATCTTACACATTACCTA 203436 36 100.0 37 .................................... TACAAATGGATTGATATAAATGGTCAAATTGTTAGAA 203509 36 100.0 38 .................................... TTTTGTAATGTAAGCACCAACATTTCTTATATCTTTCA 203583 36 100.0 36 .................................... TTCAAAAGCGTGGTGCTATACATTATCATTGTTTGA 203655 36 100.0 38 .................................... TATTTATCGTTTATAGTCAATATTCATCATCTGGAAAA 203729 36 100.0 37 .................................... TTAGACATTGCTTTTCGATTCTGCTTACTTGGACTTA 203802 36 100.0 38 .................................... TTCTAAAGTAAACTGTCAAGAAGTAAAAGTTCAATATA 203876 36 100.0 38 .................................... TAGTAAATGTAAGTACACAAGCTAATATTCGTACTAGA 203950 36 100.0 37 .................................... TATTTAAATAATAAATAAGAGAGGTAAAAATTTATGA 204023 36 100.0 36 .................................... TTTATAGATGCACTACATGAGCATCAACATGAGTTA 204095 36 100.0 38 .................................... TCAATGAATGTCAGAGAAGATAAGATTGATAAGATAGA 204169 36 100.0 38 .................................... TTAGGGAAAAAGGTTATCACTATATTATATCTTAAAGA 204243 36 100.0 36 .................................... TGGATTAGTTATAGTTGCTGGAACTAATTACAATTA 204315 36 100.0 38 .................................... TTTTAGTCTTGTCTAATACATAAGCATATCTTAATTGA 204389 36 100.0 38 .................................... TTTAATATTTACTGTTGCATGGAGTAAAAATGTATGAA 204463 36 100.0 41 .................................... TGTTTATAGATGGTAGTCGTATTTTTTTTAGTTCTGCTGCA 204540 36 100.0 38 .................................... CTAAAGCTTTAGCTAATTTACTTAAAGTTTCAGATTTA 204614 36 100.0 37 .................................... CACAAATTGTACTTCGCCTACGATTGCACCTTTCTTA 204687 36 100.0 36 .................................... CTAAATTTAATAGACATGAGGAAGCTATTTCTGTTG 204759 36 100.0 37 .................................... CAGTCTAATTGGGATTATGCAAGTAGTGCTTATGACC 204832 36 100.0 35 .................................... CCCATGTTTATCCTCTATGCCATTTTTCATTCTTG 204903 36 100.0 37 .................................... CATTGAAACAACTATCCAATATGGCATTAATACTTTA 204976 36 100.0 37 .................................... CTTAAAAAACGTTCCTCTGCAACTTTAAGGCTTGTAG 205049 36 100.0 37 .................................... CTGGGAAAGTTACAAATATCTATGGAGAGAACGGAAC 205122 36 100.0 37 .................................... CCCATGTATCAGATCAAGGACATTGGACTTACGATCA 205195 36 100.0 37 .................................... CTTCTGTGCCTTCTATTTTATCCCTATAAATTATTCT 205268 36 100.0 38 .................................... CTATATTGTGTTCCAACTAAATCTAAACTTATATAATT 205342 36 100.0 37 .................................... CAGTTATAAGAACTAGAGATGATTTTATGAATGAAGT 205415 36 100.0 36 .................................... CTAGTAATATCTTTTCTTAACTCTCTTTGCATTTCA 205487 36 97.2 36 ...................C................ CTTTAAACTGGGGCTTAATACCCCAAGTTCCATAGC 205559 36 100.0 37 .................................... CTTTCTATCAGCCATAGTGCCAATATTTATGGATTTA 205632 36 100.0 36 .................................... CTCTGCTACTGGTGCCGTTGTTTCTGTAGTGGCTGG 205704 36 100.0 41 .................................... CGATAGCACATTTAAAGCAATTAAAGCAGTAGAAATAGTAG 205781 36 100.0 36 .................................... CAAGATGTATTGTAGTTACTCTATATAGGATATAAC 205853 36 100.0 36 .................................... CTCTTATACATGCATTCACATAATCGAGCTTATTGT 205925 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 36 36 99.9 37 ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAA # Left flank : CATTGATGGAAGAAATTGAATATGTACCTTTTTTAATTAGATAACAGCAAAGGAGTATGTTATGATATATTTAGTTAGTTATGATATAGTTAATGATAGAAAGAGGACTAGACTTCATAAAATGCTGAAAAATTTTGGTGCTAGAAACCAATTCAGTGTTTTTGAATGTGATTTAGATGGTAAAAAATATGTTGAGCTTGAATATAAAATAAGAAAGATTAAAATTGAGAAGGGTGACAGCATTATGGTATATCCTATATGTTCATCTTGTGAATCTAAAATTATAAGAAGAGGTATATTTGTTCCACTTGATGTTACAAATATGATTTATTAAAGCGCAGGCCTATGTGTAATTAAAACACCGGTACCCTGGCGATGCTTTAGAATAGGCACTTGAGAAGCAATTACTATAATATCTTGTGCAAATATTTAATTGAAAATGATACTTGGCGAATAAGGTGCCTATAAACCAGTGGTTTCAAGGGGTAAAACGCGAGCGA # Right flank : CTTTAATTATAGTTCTTTATACACATGGAAAGCATATATTACTTAAGACATTAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //