Array 1 40894-45004 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGJTD010000012.1 Acinetobacter nosocomialis strain AC1537 AC1537_contig_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 40894 28 100.0 32 ............................ TTACGAATTTGATCAAGATTTTGCTAATAAAA 40954 28 100.0 32 ............................ TTAGATTTTGCCATCTCTTCGCGAACACGTTT 41014 28 100.0 32 ............................ ATTTAAAAACATCTTCACATCACCCATCGTTA 41074 28 100.0 32 ............................ AATCGCAAGCATAAACATAATTACATCGACAT 41134 28 100.0 32 ............................ TTGAAGTGATTGGCGTTCCTCAGTATTCAACT 41194 28 100.0 32 ............................ ACCAACAAAAGGCTCAACCCATGTGGTGATAT 41254 28 100.0 32 ............................ TTTTAATGAGTCTTTCTTAATGCCTTTCTCGT 41314 28 100.0 32 ............................ TCATAAGCAACTTTTAGTGGCTGCCCTTGCTC 41374 28 100.0 32 ............................ AATCAAGCCTGTCTTAGGTGTGATGACTGGTA 41434 28 100.0 32 ............................ AAATAGTTAGCATGATTAGATTTGTTGGTATG 41494 28 100.0 32 ............................ GATTCAGCCGCTTTTCTATAGATTTCTAAGTT 41554 28 100.0 32 ............................ ACACGAGTGCTGTGGGGTGATTATTGATAAGC 41614 28 100.0 32 ............................ AGCAGAAAGGCTCCTCCATCCATTTACATGGG 41674 28 100.0 32 ............................ TTTCCGATGCAGAAAAATTAACTGAAGCATCA 41734 28 100.0 32 ............................ ATTAGAAATACTAAAGTTAAAGATTTTAAAAA 41794 28 100.0 33 ............................ ATATTCTTTGCCCTACGATCTGTTACGCCGTCA 41855 28 100.0 32 ............................ GTATGGATTCATAACGATAATAGACGTACCTT 41915 28 100.0 32 ............................ ATTGCTCACCCTGCTTCTTAGCTTCCACATAC 41975 28 100.0 32 ............................ TTTGCAAAAATTATCAATATCGGCTTTCCTCT 42035 28 100.0 32 ............................ ATTTCTTTTTAAACCCGCCATCATTGACATAA 42095 28 100.0 32 ............................ AAGAAGATGTGCGGACATCAACGGCGTGAACA 42155 28 100.0 32 ............................ TATGAGAGACTTCGACAACAATGGTCGGGTTA 42215 28 100.0 32 ............................ TAACTTAGAAGTGATTGGCGTTCCTCAGTATT 42275 28 100.0 32 ............................ TTCATCATCCATTGTTATGTCTGTGCCAATTG 42335 28 100.0 32 ............................ AAGATGGTAACGGATTGCCATATGTACTATAC 42395 28 100.0 32 ............................ AACCGTTACCGCCAAAAGTAACCTCGAATGAG 42455 28 100.0 32 ............................ AACAATCGATCTAATCCGTTTAATTGAAATTT 42515 28 100.0 32 ............................ AATTAGCGGGATTGCAGAAACTGAGGTGTAGA 42575 28 100.0 32 ............................ AAAGAAAGTTGGTGCAAGGCGAGTATCATCAA 42635 28 100.0 32 ............................ ACTACCCGGCTGTACTCTCGTATGGCCATGGC 42695 28 100.0 32 ............................ TTTATTAGATGGGAAAGTTGATTCTACAACTA 42755 28 100.0 33 ............................ TAACATTGCAACTTTAGCTAGTGAAGCTTGTAA 42816 28 100.0 32 ............................ TAATTCAGACTGTAAATACTCAAGCTCATATT 42876 28 100.0 32 ............................ AATATCAAAGTTAGGTAAGTAATCATGAATAT 42936 28 100.0 32 ............................ TAAAATCGTCTATATGTTCTACCGTAGAAGTA 42996 28 100.0 32 ............................ TTAAGACAATGGAGGGTAAATATATGAACTTC 43056 28 100.0 32 ............................ TATTGCAAACCATCCCCATGTGTCAGTTGCCC 43116 28 100.0 32 ............................ AAGCTTTAGATGATAGTGAAGACTCTTACACT 43176 28 100.0 32 ............................ TATAGCTAAAAATGGCAGAATTAAAAACAGTT 43236 28 100.0 32 ............................ TTGAGCTACCGTGGTTACTGCACCGCCAAAGC 43296 28 100.0 32 ............................ TTAAAGTTGAGGCGCTTAGTCTTAATTTTCTT 43356 28 100.0 32 ............................ AATTGTTGCGTCAGGGATTACTGCAGAACAAA 43416 28 100.0 32 ............................ AGTTACGGAAGAACCGCCACCAACAGGTTTTT 43476 28 100.0 32 ............................ TTGAGAACCCAAATTGATCTGCTAGACTCTGA 43536 28 100.0 32 ............................ TTTGAAAGTTGTATTTGAATCAACTACGCCTA 43596 28 100.0 32 ............................ AGCAAATGCGATCCGAGTATTCCTCCACCAGC 43656 28 100.0 32 ............................ AAAGCAAAGGGCTTGGTATCACTCAAAAGAGA 43716 28 100.0 32 ............................ ATGTTTTGCATCGATATCTGCCACGGTAATGT 43776 28 100.0 32 ............................ AAGTCCCAAAATGTCATGACAGGCAAATGATC 43836 28 100.0 32 ............................ GTACCTAGATTTACTGTTTGAATTGTCATTTT 43896 28 100.0 32 ............................ TGCAATGATTGAACCGCCCCATAACACATTAA 43956 28 100.0 32 ............................ TAACGGTACTGTCATTCCTCGTGGTTTGTATG 44016 28 100.0 32 ............................ TGACTTATTAAGTTCCCATCATCTAAGTTAAT 44076 28 100.0 32 ............................ TTTTTACCCATACTAACCCATCGCCTTTTGAA 44136 28 100.0 32 ............................ AATCAGCAATGATTGAAGGAGACTTAGCACTT 44196 28 100.0 32 ............................ TGTCTTGCTTTGCAGTCATTATATCTTGCTAC 44256 28 100.0 32 ............................ ACTAGGATTAAATACAACTTTATTTGTAAATG 44316 28 100.0 32 ............................ ATTTATTCTAGTTGTAGGTGCTTTAGGTGCCG 44376 28 100.0 33 ............................ ATTGAATATTGGGTGTGTCTTAATTTTTGCATT 44437 28 100.0 32 ............................ TTTTTGTTCTGTTCGCTAGTCTCTTTGTGCGC 44497 28 96.4 32 ...............C............ ACTATTTTCTAGTGCTTCAACTGCTGATATTA 44557 28 100.0 33 ............................ CAACAGCCATACCAGATAAAGCTGCTGTAGCCA 44618 28 100.0 32 ............................ TTTATACAAACGGTGGTATTGACCAATTTAAA 44678 28 100.0 32 ............................ TTGATCACTATCTTTTAAATCAACGTTATATG 44738 28 100.0 32 ............................ TTGATCACTATCTTTTAAATCAACGTTATATG 44798 28 100.0 32 ............................ ACACAGTCGAGAACTAAGTCAAAGATTTCGCT 44858 28 100.0 31 ............................ AAAGGCGGTTGCTGCAAACTCGTTCGTTCAA 44917 28 100.0 32 ............................ TTTTAAATAACGATCCTGTAATCCACGCCAAC 44977 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 69 28 99.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CTGGACATTCGACGTTGGCTTGAGCGTTTAGAAGATTATGTACATGTCACTTCTATTCGTGAAGTACCTAATGATATTAAGAACTATGCCATTTATAAGCGTAAGCAAGTGAAAACCAATGCACAACGTTTGGCGCGTCACCGTGTAAAACGTGGGGATATTGGCTTTGATGAGGCATTAGCCAGATACAGCAATGTAGTTACGACAACCAACATGCCTTATATTGAAATGAAAAGCCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAATCTGCTGAAAAATCTCAAACTCAGGTTTTTAGCACTTATGGATTAAGTTCAGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATAGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTTTTTATGTTAAAACTATT # Right flank : GTATTATTTTCAGTTATACTTATCCAAGCGAGATATTTTGTAAGTAATTCTTGTAATAAAAGCCAATTTTTCAGTGAGATAATTGGCTTAAGTGAGAGTTACGATTATCCGCTTATTCGTCGGTCATCCCAATAACACGGTACTACAATCAAGTGGTTCTCATGCAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGCACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAAGACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGACCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATTACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //