Array 1 3898-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATHI01000015.1 Desulfohalovibrio alkalitolerans DSM 16529 ctg23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3897 32 100.0 33 ................................ GAGGTCGGCTACCAGGGCGGCACAGCGTTCCTG 3832 32 100.0 34 ................................ ACGTCCGTGCGGCGCACGTTGTCCGGCCCGGCGT 3766 32 100.0 36 ................................ ATCCGCTAGCCAGTAGGAGCAGGAGAAATGACCACG 3698 32 100.0 33 ................................ TATGATCCCGAGGCCGAGTGCCCAGTGTGGGAC 3633 32 100.0 32 ................................ TCCCGCACCTCTGGATTGGCCAAGCTGGCCAA 3569 32 100.0 34 ................................ TTGCGACCAGGCATCCATCCAGTCCGCTGTCCTT 3503 32 100.0 34 ................................ TCAAGATCGGACATGCCTGGGCCGGGGGGGTCTT 3437 32 100.0 33 ................................ TTCCCGCAGCGTCACGAGGCCCTGGGCCAGGAG 3372 32 100.0 33 ................................ TTTCCCTTGCTGAGCCATCCAGCTCAAGAGGTC 3307 32 100.0 33 ................................ TTCTCTGGGACGTCTCTGCACGGCGCGGGACGG 3242 32 100.0 33 ................................ CATTCCGACATGCCGCCCGAGACCAAGGAGCGG 3177 32 100.0 33 ................................ GTCGAGGAAGCGTGGCTCAAGGGGCTTCTGGCC 3112 32 100.0 33 ................................ AACGAATCCCGCCGCACGTTCTCCGCTGGCGAG 3047 32 100.0 33 ................................ AACGCAGGCCGCTCCAAGGCGGCCTGGCGCGAG 2982 32 100.0 33 ................................ CACCGGCGCGGCCCATTCCGATCACAAGTACGG 2917 32 100.0 36 ................................ ATCGTGGGCGACGTGATCGGCGTTTCGGCCGGACAC 2849 32 100.0 34 ................................ TATCTCGACGAAATGGGCGATGCTGGCGCCCCCC 2783 32 100.0 34 ................................ ATCTCGGCCATCTCGCCCAACGCGCCCAGGCCGA 2717 32 100.0 34 ................................ ACGGACACGGCCAACGCCGTGCCCGGCGAGACCG 2651 32 100.0 36 ................................ ATTGTCCGCCACCAGGCGGGCGGCGTGGGCCAGATC 2583 32 100.0 34 ................................ ACGTCCGTGCGGCGCACGTTGTCCGGCCCGGCGT 2517 32 100.0 34 ................................ AGCGTCCCCTCCTTGTCATAGTATGTGAGCGCCG 2451 32 100.0 34 ................................ AGGATGCCCTCCAGCACGAGCAGCCCCATGTAGT 2385 32 100.0 35 ................................ GTACTTGCGCCCGAAATTCTCCAGGGCCTCGGCAA 2318 32 100.0 35 ................................ AGTCTTCGTGGGATTTTCGCTTTCCGGCTCCCGGA 2251 32 100.0 33 ................................ AGCCTCGGCCGGGGTGCATACTCGGCAGTCGAT 2186 32 100.0 34 ................................ CTCCTAGATGGTCTGTATCCCGTAGGCGGCCAGA 2120 32 100.0 33 ................................ GCTGAATCCGTGGACACCATCCGAGCCCAGCAT 2055 32 100.0 33 ................................ AACTGGAACGCGGACACGGAGATCGTCTACGAT 1990 32 100.0 33 ................................ ATGGTGTCGCCGTCGGCCACGCGCACCACCTGG 1925 32 100.0 34 ................................ AAGGAGGTCGATTCCACGGCCGTGTTGTCGGCCC 1859 32 100.0 32 ................................ GTTCAACGCCCAGGGCAACGCGTTCGACGCCT 1795 32 100.0 35 ................................ GAGGTCCTGGCCGAACAGGCCGGGATCGTCCTGCC 1728 32 100.0 34 ................................ GAGCCCCGCGGAGTTGAGCGCGTACTGGATGTCC 1662 32 100.0 34 ................................ AGGGCCAAAACGGCAGTCAGGAGCGCTCGCACTG 1596 32 100.0 34 ................................ ATCGTGGAGGGCCTGCAAAAGTGCCTCACACCGG 1530 32 100.0 34 ................................ TTTGCCCTGGGATTCATCCAATTCAATAGAAATG 1464 32 100.0 33 ................................ ATCGTGGAGGGGTTGCAACGGGGCCTCACGCCG 1399 32 100.0 34 ................................ CGATATGCCCCGGCCTCGCGTCGGCCGCCGCCTG 1333 32 100.0 34 ................................ CACCAGGAGAGCGCCTGGCGGCGTGACGCCAGAT 1267 32 100.0 34 ................................ TGATACGGCGTCGTCGTAGCGTACATATTCGCCG 1201 32 100.0 35 ................................ ACCAGCTATCTGCCGGTGCACGACGGCGAGGAATG 1134 32 100.0 35 ................................ TTCGTCGGGGCGGTGCCCGACGACATCGGCGACGA 1067 32 100.0 32 ................................ TATCCGGAGCGGGGAACGGTGCGCGTGCGCAT 1003 32 100.0 32 ................................ GCTTTGGAGAGCGTGGCACCGTTGGCCTTGAT 939 32 100.0 34 ................................ TTTGGCCCTGGACCGGTTCTGCCGTCAGATTGTG 873 32 100.0 33 ................................ AATCCGCAGTGTGGAGAGGTATTCCCTGGCATT 808 32 100.0 35 ................................ AACGGCCTGTCCTGCGCTGCCATGGTCGCCCCCCT 741 32 100.0 35 ................................ AAAAAATGCACTACACGGGTAGCAACACGAACGGC 674 32 100.0 33 ................................ ATGGCCTATTGGCGATGGACAAACAGACTCGGG 609 32 100.0 33 ................................ GTCGAGCCACCCGAACAGATCACCGAACACCAG 544 32 100.0 35 ................................ CTCACCACTCCTGATACCATCACCGCGGCCCGCCA 477 32 100.0 34 ................................ GTACTGGCCGCGCGGCACGACGGCCCGAAACGTT 411 32 100.0 35 ................................ TTCATCTGGTCGCCCTTGACCTCCGGCTGCAGGAT 344 32 100.0 33 ................................ AGTCTCCACGACCGTGATCCATTGATAGGCCGC 279 32 100.0 33 ................................ CTGGTAGCCGACCTCGACCTCTCGGACAGTGCC 214 32 100.0 35 ................................ GTTTGGTTCGGGCAGCAGGTCCTCGGGCACGCCCA 147 32 100.0 32 ................................ AATAAAACATGAGAGGTTGACCTATGAAGCCC 83 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 59 32 100.0 34 GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Left flank : CTACCCGCCATATCTCTGGAGGTGACCATGCTCGTTCTCGTCAGTTACGACGTTTCCACAATTGATCCCAAAGGTCCGGGCCGTCTGCGGCGCATGGCCAAGCTCTGCCAGAATTGGGGGCAGCGCGTGCAGAACTCCGTCTTTGAATGTCTCGTGGATCCGGCGCAGTGGACGGCCCTGCGCGCCAAGCTTTTGGATTGCATCGACCCGGAGCATGACAGCCTGCGCTTCTATTTTCTCGGCGCAAATTGGCAGCGTCGCGTGGAGCACGCAGGGGCCAAGAAACCCATTGACCAGGAGGGGAATCTCATCGTTTGAACCCGGCGCGGACCCCAAGCGGACATGAAATCCCCGGGAGGTCCGCGCGCAGAGAAATTGATGATAAATTAGACTATTGAGCGAGTGGCTTGTGGTTTGGGGATACAGAATGATCGCCCGTGGCCGCCATTCGCGCACCTGCCCCCGGCAAGCCGCGTGAAATGTGGCTTGCCAGCCGGGCA # Right flank : CTTATCGAGGCGGTACTTGCTCCCTCGCTTTGAAGTCGCCCCCCGCACGGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 52-1862 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATHI01000019.1 Desulfohalovibrio alkalitolerans DSM 16529 ctg27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 52 32 100.0 33 ................................ GGACGCCTTGGCATCCTGCCCAAGGCCAGTCAC 117 32 100.0 34 ................................ GAGACCACGCCACCGATCACTGCCGCGTTGGCCG 183 32 100.0 34 ................................ TTCCTGGGGGCGGGGGCGAATCTCGTCTTCCCAC 249 32 100.0 34 ................................ ATCGCGATCCGCCATCACCGCGAGCGCGGCCCTG 315 32 100.0 35 ................................ AGATCAGGTCGCGTCCCCGTTCGGCGGGCCATGTA 382 32 100.0 33 ................................ TGGTCCGGAGCGCGGGTCATTGCTCGTTTCCTA 447 32 100.0 34 ................................ CCTGATTCGTGCCTTCCGCTCTCCATCCGCTCCA 513 32 100.0 33 ................................ GTCTCTGCGCCCTGCGCAGCGCCTTTGCCCGGA 578 32 96.9 33 .C.............................. ATGGCTGGCAAGCTGCTCATCCTGCGCCTGCTC 643 32 100.0 35 ................................ AGATCAGGTCGCGTCCCCGTTCGGCGGGCCATGTA 710 32 100.0 35 ................................ GCCTTGAGCCGGTTCGGAGGCAAAACATACTCCAT 777 32 100.0 35 ................................ TTCTCCCGGACGATTCGGATTGGGCGGATGCGGTG 844 32 100.0 35 ................................ CGCATCAGTCGGGAGCAACATCGGGGCCGCGGCGC 911 32 100.0 33 ................................ CATTGTACGTGAGCGTCTGCCTAGCGTACCCAC 976 32 100.0 33 ................................ ATTATGGACCACGCGCGATCGTCGATTGTGCCC 1041 32 100.0 34 ................................ ATCTCGGCCATCTCGCCCAACGCGCCCAGGCCGA 1107 32 100.0 33 ................................ GTTTCCAAGCGCGAGCGGTAGCAAATGCGTCTT 1172 32 100.0 33 ................................ GTTTCCAAGCGCGAGCGGTAGCAAATGCGTCTT 1237 32 100.0 34 ................................ GTAGTAGCCCATCTCGACTTCGCGCACCGCGCCG 1303 32 100.0 35 ................................ TGGATTGACATGACCGTCAAGGCGACGAACGGCTT 1370 32 100.0 34 ................................ TTGGAGCGCGGGTCCGGCCCGGATGGGCGCTACG 1436 32 100.0 33 ................................ ATGCGCGAGGCAGGGGCCTCTCCCGAATCCATT 1501 32 100.0 35 ................................ GAGCCAGATCATGGGATGCGCCGCGAGCTGCGGCG 1568 32 100.0 33 ................................ AATGCTCCCGACGGGGTGCGCGCGCCGGTTTTC 1633 32 100.0 35 ................................ GAGTTCGGCTACCGAGACGCACCTCCAGACGTCTG 1700 32 100.0 33 ................................ GTCGTTTGGCTGCATCGTGCGCAAAGAGGTTTA 1765 32 100.0 34 ................................ AACAAATAGATATCATGTCCTAAATGCCTATGCA 1831 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 28 32 99.9 34 GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Left flank : GGGGCGTGGATTGAAACATCCTGCCTGCCAGGAAATATGGCCTGTTTCTTGG # Right flank : AAGCCTTTTCTTCGCCCATCCTGGCCGATCCCCGGTCGCCCCCCGCACGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 12-1561 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATHI01000024.1 Desulfohalovibrio alkalitolerans DSM 16529 ctg31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 12 32 100.0 34 ................................ TTTGTCGCGTGGATGCAGCAGGACGCCGAGGAGA 78 32 100.0 34 ................................ ACGCTCGGGCCGTACTGCGCAGGCGCTTCCCCGG 144 32 100.0 35 ................................ ATCCGCAACGAGGGTCTGCGGCTCATCCCCTCGGG 211 32 100.0 35 ................................ ATCCGCAACGAGGGTCTGCGGCTCATCCCCTCGGA 278 32 100.0 35 ................................ ATCCGCAACGAGGGTCTGCGGCTCATCCCCTCGGA 345 32 100.0 34 ................................ CGGTCGCAGACGGCAACATGGGGGCACTGCTCGA 411 32 100.0 34 ................................ AATGTCCGGTCCAAATGCGGCACGAAGCGCGGCC 477 32 100.0 33 ................................ CTCGCCGTCCATGATGATGAGCCGCGAGTAATG 542 32 100.0 35 ................................ ATCCGCAACGAGGGTCTGCGGCTCATCCCCTCGGA 609 32 100.0 34 ................................ AACGACGACTTCGAGGCCACGGTTGCGGTGCGCC 675 32 100.0 34 ................................ AAATCACCCGCAGGGACTTTACCATTTGCCAAAT 741 32 100.0 33 ................................ AAGACTGGTGACGTTGCTCAATATACGCCCGTG 806 32 100.0 34 ................................ GTGCTCGACCCGTGGAACGAGCTTGAATACCACC 872 32 100.0 33 ................................ CTCATCACTCATGTTCTCGACCGCGACCTTCCC 937 32 100.0 35 ................................ CTTCATGCGCGACGAGGCCCATGCGGCGAACACGT 1004 32 100.0 34 ................................ GAGAACCGCGCCCTTGCCGAATCCTTCGGGCGAG 1070 32 100.0 34 ................................ GTCGTTTTCGATACTGCACGCACAGTCGCTCATT 1136 32 100.0 34 ................................ GTTCACGGTCTCAAGCGCACTCCCGCAGTTGGTG 1202 32 100.0 34 ................................ ACGATCGCGGGCTTGGGCTCGGGTTCGGGTTCGG 1268 32 100.0 33 ................................ TGGTTCAAATGGAACTTATTCTACGCCCTGGAA 1333 32 100.0 34 ................................ TTACTTGTAGCGTCGAGGTTCCTTATATCACCAC 1399 32 100.0 33 ................................ ACCGGGTTGGATCATGTCGGGGGTGATTTCCAT 1464 32 100.0 34 ................................ ATCCGGCGGGGCACCGGCAGTTCGGAGATGGCCG 1530 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 24 32 100.0 34 GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Left flank : CGGCCGAAATTG # Right flank : ACGGCCATGTCCGGCGGCGCGGCGAATCCCGACGTCGCCCCCCGCACGGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [8.3-16.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 51-1870 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATHI01000018.1 Desulfohalovibrio alkalitolerans DSM 16529 ctg26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================= ================== 51 32 100.0 35 ................................ CAAGCATCTGACACCTCTACAGCGGCTCGACGCCG 118 32 100.0 33 ................................ CACGAGCTGGGGCGTGGTGATGGCGACGGGATC 183 32 100.0 34 ................................ CGCTTCGTGCATCCGCTCTTTTCGTGCTGCTCGA 249 32 100.0 34 ................................ CGCTTCGTGCATCCGCTCTTTTCGTGCTGCTCGA 315 32 100.0 35 ................................ TATAATCAATGCGAGCGGTGCATCATGGAACACAA 382 32 100.0 34 ................................ AACAAATAGATATCATGTCCTAAATGCCTATGCA 448 32 100.0 34 ................................ AAGCCTTTTCTTCGCCCATCCTGGCCGATCCCCG 514 32 100.0 33 ................................ GCTACCATGTGGGTGCGCGCAGTGCGCAACAAC 579 32 100.0 34 ................................ TCCATCTACGAGATTAAGGTAACGCGCGCCGATT 645 32 100.0 33 ................................ ACGGAAGCCGAGGTCGCCCCCGAGGACGCTCCG 710 32 100.0 35 ................................ AACCTCCGTCCACGTCACGGTCATCTGCGTCACGA 777 32 100.0 35 ................................ GAGTCATGGCAGTGCAGCACATGCAAAGAATGGTT 844 32 100.0 34 ................................ ACGCCGATCTGCGCGGCCGTCTTCGCGATCTCGT 910 32 100.0 34 ................................ AACCCCCCGAGGCTCGGCCGGAAAGACCGGCCTG 976 32 100.0 33 ................................ AAATCGTGCGCGAGGCGTCGGCCCTGCACGGCG 1041 32 100.0 41 ................................ CCTACTCGAGTCCGGCCGTGCGCGCGCGGCCCGCGCCCCGG 1114 32 100.0 33 ................................ ACGCTGCGCAGGCTCTACAATTGGGCGGCCATG 1179 32 96.9 35 ................A............... CTTGGTCGGGATGGTATGCAAGGGATCGGCCGGGC 1246 32 100.0 34 ................................ CTTTTGCGCAGGTTGTCGCGTGGGCGAGGCGGCC 1312 32 100.0 33 ................................ CTCCACATCGAACACGGCCAGCACCGATTCCAC 1377 32 100.0 38 ................................ TTGATGAACGCAAGAAGAACGAGTTCGTCAGGCAAGCG 1447 32 100.0 33 ................................ TGAATGGAAACTGTATTCCGGACGAGCGCAGGT 1512 32 96.9 33 .......T........................ TTGTCGCAAGACCGTGACCATGACCGGTGCGGA 1577 32 100.0 33 ................................ TCGGCCAGCGCGGCCAGATCCTTGTCGCGGGGG 1642 32 100.0 35 ................................ GGCAAGATGGCCGCCGTGGTGCACGTGAAGCGCCA 1709 32 100.0 34 ................................ GATTTCGCCCAGCGGCGCGTTCATCCCTCGCCCC 1775 31 96.9 33 ..................-............. TTCGTCCGGCTCTCCGATGTACGACTGCCCGAC 1839 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ========================================= ================== 28 32 99.7 34 GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Left flank : GGGGGCGTGGATTGAAACTTGCGAGGCTGCAATGCCTCGACCTCGGCGCGG # Right flank : CCATTGCCTACGATCATATGATCTACTCGGCTAGTCTTCGGACAGGACTCTGGAAGAACAGTGGGCTACCTGCTGTGTCATAGCGGAAGGCTCTTGCGATAGGAGCGCTTGGTTCGAGCATTGAGGAAGTGGAGTATAGACGCAGACGGAACATGGAATTGCCAGCGCGGGGAGAAAATCCTGGCAGGGCGCTTGTTTCCGGGCGTTTGTGCTGCTAGTGTGGGTGGGTCAACGGTGAGGACACGAAGGGGTACAAATCGGCCTGCGGGCGCGCGCTTCGACAAAAAATAGGCATTTATATCAATGCATTGGCTGTCACCCGCCATGTGATGGCGCCGACTCTCCCCTTCGGCACCACTTTTCAGAAAGGGCTCCGCGTAACAGCGCGGAGCCCTTCGCTTTTTTCGCAAGGTGATTCCCGCAAAAACACCGAAAATCGCTTTTCCTGCCGGGTAAACGGCTTTTTAGGGCAAAATGGTAGGGCAAAAGCCCACCGTTGA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCACGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //