Array 1 970103-961036 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDB010000001.1 Clostridium algidicarnis strain CM006 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 970102 29 100.0 36 ............................. AAACAATATAAATAAGCTAGGCGTTCAAGATTTAGA 970037 29 100.0 35 ............................. TTAACTAAATTAGATAGTAGTTGTCTTATGTCCGT 969973 29 100.0 36 ............................. TTTTATTGATAATGGTAATTGATTGAATTTAGATGG 969908 29 100.0 37 ............................. CCCAAATTCATCTCTGTGTAGAGAATTTAATCTTTCT 969842 29 100.0 35 ............................. TTGCAATTTTGGTATATTCATTCTCAAATTCATAC 969778 29 100.0 35 ............................. TGTGTTAACAAAGACGAAGAAAAAACAGGCATACC 969714 29 100.0 36 ............................. ATAGCAACTGTGTATTTACTAGTACTAGCATACATA 969649 29 100.0 35 ............................. TCTTTTAACTGAACTAACATATCTTTAAGTTTATC 969585 29 100.0 36 ............................. CTTTAAAATCCGAGTAATGAAAGTGTCTTATTTTAG 969520 29 100.0 36 ............................. CATGCTTATTGGAGGAGACACGGGTTCGGGCAAAAC 969455 29 100.0 37 ............................. GAGGTTATAGCAAAGGCTTCTATGGCAAGTTGGGTAG 969389 29 100.0 36 ............................. AAAAAGGAGGGAAACAATTATTGGAATTTTTTAATT 969324 29 100.0 35 ............................. AGATTATCAAAATTAGAGAAGGATAATGTAACTCC 969260 29 100.0 36 ............................. ATTATAAGCATTGCCCTCCTTCTATTATTAAATTTC 969195 29 100.0 37 ............................. CAGAACAGAGCATAGATGGGGATGGGATATTAAGTTC 969129 29 100.0 35 ............................. AAGATGGCAAATTAGCAAGTATTAGTGGTGTAAAT 969065 29 100.0 36 ............................. ATGATAGGCAGCAGGCTAGGAATTATAATATTGCAA 969000 29 100.0 35 ............................. AAAATTAAGATAGATATAAATGTTAGGGCCATATA 968936 29 100.0 37 ............................. GTCGTAAAAGATGCTGATTATACATTTAGTTTCACAT 968870 29 100.0 37 ............................. TCTTTCGTAATAACTAGAGGACTTATAGAACGGCCAG 968804 29 100.0 37 ............................. AGTGTATTCTCAAATTCAATTGTATTATGAGTATAGA 968738 29 100.0 35 ............................. TTAGCAGTAGTAATGTCTGTAATGCCATGTCCCAA 968674 29 100.0 37 ............................. AGAAAAGGAGGATAATAAAGTGGAAAAGTTAACATGG 968608 29 100.0 37 ............................. AGGAATAGTAGAAACTACAGTTAAGCAAGCTTGCCAG 968542 29 100.0 36 ............................. AAGGGCTAGTCCGAAAGGGGATTGTACAATGGAAAA 968477 29 100.0 35 ............................. CATTTTGACAAAACTTTAGGAGAATATGTAGGATT 968413 29 100.0 37 ............................. GTAGGAAATGCAACTTATATTAATAAAATTAATAATA 968347 29 100.0 35 ............................. AAATATGCTAATACTTCATATATATTTTTAAACAT 968283 29 100.0 34 ............................. GAATTACACATTTCTATCCCTATACTATTTGCAT 968220 29 100.0 36 ............................. TATATATTCTAATCACTGATTAATTAATAATCACTA 968155 29 100.0 36 ............................. GCCTTTAGCAATTAAAGCATTCCATGCCACATCACT 968090 29 100.0 36 ............................. CTCACAGAAGTAGGATATTTTAAATCTACAGTAGGA 968025 29 100.0 35 ............................. AACTACCTGTAATATTTGTGCAGTTACCTAAACTT 967961 29 100.0 36 ............................. AATACAGACGAATGTAGTCTTTATAAAGATTGGGAA 967896 29 100.0 36 ............................. TGGCTCATGTGGGAGTTTTTTTTTGCTTTATTTCTT 967831 29 100.0 36 ............................. GATAATGTTTGTGACTTAAAAACAGCTAATTATGAA 967766 29 100.0 36 ............................. ATATAAATGATAAATCAAAGTTTGTTACTTTGACTT 967701 29 100.0 36 ............................. TGCGTTAAAGTTTAAATTTTTAAATTTTACTTTACA 967636 29 100.0 36 ............................. ATTACATTTAAAGGTTTAACAAGTGTTGGTTCTAAC 967571 29 100.0 36 ............................. AAACAAAAGCTATACGCATAGTAAAACTATAGATTT 967506 29 100.0 36 ............................. ATAGTTTTTACAATACTTTCCATCGGAGCAACCTCA 967441 29 100.0 36 ............................. TTTGAAGATTTTATTACTCTTACATTAGACAAAGAA 967376 29 100.0 36 ............................. GTTAAAAAAGTAAATGCAGTTGAAACTGAAATTTTA 967311 29 100.0 36 ............................. TCTAAAAACAACTCATCTTTCTTTGATTGTAGTAAA 967246 29 100.0 37 ............................. TTGAGCTTTCTAAACCATGATATTCTCAATTGCAAAT 967180 29 100.0 36 ............................. CAGTAGAGGATAGAGTGAATAACCGTGTAGGAGTAA 967115 29 100.0 36 ............................. TAGAAAAAGGGTGGAAGTTATTTGAAGATAAAGTTA 967050 29 100.0 36 ............................. TATACTCTAAAAAGCTATTAAACCTACCGTCTATAA 966985 29 100.0 36 ............................. TTCTGATAGAAAGATTGTAAACAATTTAGAAATAGG 966920 29 100.0 36 ............................. CTACTCTTTTAATTAATTTATCCCCAATTATTTCAT 966855 29 100.0 36 ............................. TAGGAGAATTGGAAGGTAATAAAATAGAAGTTTTAA 966790 29 100.0 35 ............................. CTAAAGGTGGATAATACAAGGATGAAGCATAGTGT 966726 29 100.0 35 ............................. TTACTTTTTTATCAAATCCTAGTGAGTTATATTTA 966662 29 100.0 35 ............................. AAGTAACTCATATCTTGTATGCCTGTGCAAAAACT 966598 29 100.0 37 ............................. GCACAAATTAAGCCTGTAATGTAGTCTAAAACCATTA 966532 29 100.0 35 ............................. TAAATAAGTTAAAAGGTGGAATAAGCTATGTTAAA 966468 29 100.0 34 ............................. CAACGAAAGTTTACAGAATTAGAAAGGGAATTAG 966405 29 100.0 37 ............................. TAAGACAAGACTCACCCTTAAAAGTCTAAAAATGATT 966339 29 100.0 35 ............................. TATAGAAAAGAACATGGTTTATTAATCTTACTCTA 966275 29 100.0 37 ............................. TTCTATTAGGAAGTTATGTTCACAGTTGGAGTTCTGG 966209 29 100.0 35 ............................. CGTTGTCGGACGTAGAGAACAATAAAACTAATCCA 966145 29 100.0 36 ............................. GTTAACATTTAACTTCTTGGCTATATCTGTTATCTG 966080 29 100.0 36 ............................. ACGTAAAAAAAAGTGTAAATTGGAAGAAAGATTTTA 966015 29 100.0 37 ............................. GGTATAGCTTTTATATCGTCCCAAATCCCCCTTAAAG 965949 29 100.0 35 ............................. ATGAAAAAATAGAGGTAAATATAAATAGTGGTGGC 965885 29 100.0 36 ............................. AAATTTATAGGTTTAACAAGTGGTGTACTAGGATTC 965820 29 100.0 36 ............................. CTATTATTGCAACGTGGTAGAGAAAAACTTGCAGAA 965755 29 100.0 36 ............................. TAATATATTAATGAATAATATAAAAGATAGCATAAT 965690 29 100.0 38 ............................. ATAGATAAATAAAAATAATAAAAAGAAAGAAGGAATTA 965623 29 100.0 35 ............................. AGATAGGCGAAAATAATCCAATGTGGAAAAAAGAA 965559 29 100.0 37 ............................. TTAATAATATTGGGAGGCTGCTTTTTAATCCTCTTTT 965493 29 100.0 35 ............................. TTTAGATATAACAAGTTTAGCTCCATCGACTATAC 965429 29 100.0 37 ............................. ATAGTTTAGGAGGAGAATTATGTTCGATATAAGTACA 965363 29 100.0 37 ............................. GAAGTTGGAGAAGGAGATAACATAATTGATGGTAAGC 965297 29 100.0 36 ............................. GTGCCTAAAGAACTACAAAATGGATACATCTCTTTA 965232 29 100.0 36 ............................. GCAAGCTCTTGTCCCCATTATACAACGTGCATAAGC 965167 29 100.0 35 ............................. AAATTCTTATTAACATAAGTATAACACAACATATT 965103 29 100.0 36 ............................. TTACAAAAAAACAGAGAAGATATAATTAAAGGATGG 965038 29 100.0 36 ............................. ACTTGCGGATAATTCTCCAACTGTTACTTTTCCTTT 964973 29 100.0 36 ............................. AGATTTACGCTTAGAACATCATATCCTAGAAGAAAA 964908 29 100.0 36 ............................. TTCATTTACTAGGCATAAACAGTAAATTTTAGCTAA 964843 29 100.0 37 ............................. TTGTTAATGCTACTGGTGTAAAAGCTAATGATGCTAC 964777 29 100.0 37 ............................. AACTCTATAAGAGGGTGTTGCAATGGCTCATGCAAGC 964711 29 100.0 35 ............................. ATGATAGAACAATAGGAGGGAATAAAATGTTAGAA 964647 29 100.0 35 ............................. TGCTTTAAATCCTGCAAGGTCAGGGGTGGTTAGTT 964583 29 100.0 36 ............................. ACACCAAAATATGGTGACCAACTATTCAGAATTAAA 964518 29 100.0 37 ............................. AAGCTTCAACAATCTCTTTGTTTTCTTTTATCAATTT 964452 29 100.0 37 ............................. TAAAAAGCTAGTATCCAGAGGGTGGACAAGTAGAAAA 964386 29 100.0 36 ............................. ACTGTAATCTACCCCCATGTTAGTGTACACTTCTAG 964321 29 100.0 36 ............................. TTGAGGGAAATGAGCATATTCGCGAAGATACTTTTA 964256 29 100.0 37 ............................. TTTCTATATCTGTATCATAATATTTAAAAACAATTTT 964190 29 100.0 36 ............................. GAAGAGGCTGATAAGATGTTTGGAGCAGGTGCAAAC 964125 29 100.0 35 ............................. AAATGAAATAATGAAGCATTGTACTGATAAAAAAG 964061 29 100.0 37 ............................. GAAAAATATATAGATAGTAAACATATAGGTAGTTATC 963995 29 100.0 36 ............................. CCCATTAATAATTGTTCACTATTTAATAACATTTGT 963930 29 100.0 37 ............................. TTGGGAAAAGTAGGAAGAGAAACAATTGAAGAAATAA 963864 29 100.0 36 ............................. AGGTAGTACAAAAACTGATGACAGGCAAAATGCTTT 963799 29 100.0 36 ............................. TTATTACTGATAATTGGTACGCTTGCGGGTTCAATT 963734 29 100.0 36 ............................. TATATTTTATTGTATCATTATCTAATTATTTAAGTA 963669 29 100.0 36 ............................. AAGCTCCTCCTCTTGTATATTGTTCTTAATTAAAAA 963604 29 100.0 35 ............................. TTTGCAAACTTTCTATTTCTAAATCTTTTTTATCT 963540 29 100.0 35 ............................. GTTAAAAAAGTAACCATAAAAAATATACAAAAAAC 963476 29 100.0 36 ............................. TCATCTTTTAATTCGTCACCAAATTCTAAGACCTCT 963411 29 100.0 36 ............................. ATACCTATAGTAGATAGGCCCCCACCCGCCCAATCC 963346 29 100.0 36 ............................. ACAATCTTCATATTGGCTTTTAACACTTGTGCCGAA 963281 29 100.0 36 ............................. CAATTCAAAAAATATTACAAAGGAGTAATGGGAATA 963216 29 100.0 36 ............................. CTCTATAAATCTTCGGCATTCTTCATTCAGCATCAA 963151 29 100.0 37 ............................. CTCTATAAATCTTCGGCATTCTTCATTCAGCATCAAC 963085 29 100.0 36 ............................. TGTAAAACTTTCGTTAGGATATTCTATTAATGGCTC 963020 29 100.0 36 ............................. ATTTTATAAATTATTTGTATCAATTAACCTTTCAGC 962955 29 100.0 35 ............................. TTTTCTAAAGAATTGGTATTAAGGCATTTATCAAT 962891 29 100.0 37 ............................. TAAACAACTAAGGACTTGTGGTGCAGCTCGGGAGTGG 962825 29 100.0 37 ............................. ATTATTATTTGTCTTATGCTTATCATTATGCGAGTGA 962759 29 100.0 37 ............................. TTAGTATAATTTCAGAAGACGGTGACGTTGTTTTTGA 962693 29 100.0 35 ............................. TTTAACCACTTTACAAGTTTGTCACTCACATTCTC 962629 29 100.0 36 ............................. TTAGGCAATCCCATATGAGGACTTTTTAATAAAATT 962564 29 100.0 37 ............................. TTATTAAGTCGGTGTATGTGCTCAAATTATCATTGTA 962498 29 100.0 36 ............................. CTAAAACAATTTTGCAACGTAGTACCAGTAGGTACT 962433 29 100.0 37 ............................. TCGTAACTATGTCGCCTAAGTCAAAATCAATTTTATA 962367 29 100.0 37 ............................. TGCAAGTCCGCTAAACTACCTGTAATATTTGTGCAAT 962301 29 100.0 37 ............................. AAATTAAAATGGTAAATAATATTAACAACTTAATAAT 962235 29 100.0 36 ............................. CTTACAAAATCTTTTACCTTGGAATAAGCAGTTTTT 962170 29 100.0 36 ............................. AAATATTTAGCAGGTGTAAAGGAAATAGGAATAAAA 962105 29 100.0 36 ............................. ATCGCTCTTGTTGCAATTGCTGGTGGTGTTATCTTT 962040 29 100.0 35 ............................. TTAACCTATAATTACTTAATTAGTGTACTAACTAC 961976 29 100.0 35 ............................. AATATATAGATTTTGCTGATGTTAAAGCAATCTAT 961912 29 100.0 36 ............................. TTATTCTTTGAATACATATTATTACGGTTATACTTC 961847 29 100.0 36 ............................. TCTAATTTGACAATTACTATTAATCCTCCTGCTGGT 961782 29 100.0 35 ............................. TTGATACTAAATAACACAGTAAAAACATACAGGAT 961718 29 100.0 35 ............................. GATTTAAGAGGACAGTTTATAAGAGGTTTCGACAA 961654 29 100.0 37 ............................. AGAACCTTTTAACCTATATACTTATATCAACAAATTC 961588 29 100.0 37 ............................. TTGGATAATTTGCAATTTACAACTAAATTTGATAGTA 961522 29 100.0 36 ............................. CAAGGATATTATATTATGTTTAATGTTGGTAATTTG 961457 29 100.0 37 ............................. CTTGCATTATTCCGTCTGTTGCATTTTCTAAAGATGT 961391 29 100.0 37 ............................. TTGTAGATTATATTTTCTCTTTGCAATAGGGTTAAAT 961325 29 100.0 36 ............................. AAAGAATTAATAAAACAAAAAACAAACGCAGAAAAA 961260 29 100.0 37 ............................. CCCTAAACCACTTGCTTTACTTAGTTTAGTTAATTCA 961194 29 100.0 36 ............................. TCTGTTTCACCTTATTTAGCTTCAAAAGGTGTTCCT 961129 29 100.0 35 ............................. ACAACTATGGTTATACTAGGTAATGGAAATGATAC 961065 28 79.3 0 ............G...-......T.T.GT | A,C [961043,961055] ========== ====== ====== ====== ============================= ====================================== ================== 140 29 99.9 36 GTTTTATATTAACTATGTGAGATGTAAAG # Left flank : AAGTGTTTTAAATGATTAAAATTAATGATATAATGGTGGTGATATTTTGTTTGTGATTTTAACTTATGATATTGAGGAAAAGAGGATAAATAGAGTTAGAAAAACACTTAAGAAATATTTAACATGGACACAAAATTCAGTGTTTGAAGGTGAGATAACAGAGGGAAAGCTCCACAAATGTTTATCAGAGATTAATAAACTTATAGATAAAAAAGCAGACTCTATATATGTATACAGGGTAAAAATATCTAAAAATATTAGAAAAGATGTTATTGGAATAGAAAAAAGTTTTGATGAACTTTTTTTATGACTAAAACTGCATCGATGCAAACAAAGGTTCTAGGTGCGACAACACGTTGATTTTACTGTATTAGAATAGAAGTTTCTATAAAATAACAAAACATTATTCTAGGTTCACTGCAAAATTGTCTATTTAAGCACTATCAATGGTAGCGCCTAGGCCAGTAATACCAGTATGTTAATTAATTGTGATCTTTGGG # Right flank : ACATTAATCTATGAAGAGACCTTTGGTAAAAGCTATAAAGAACTTAAAGCTGATTGAATTAAATACCTTAAAGATAATATTAAATATATAGAATTGATACTCTGATACAAAACATTATTATGAAGAACTATAATTTGTTTTTTTATTGCTCCCTTTTTTTATGATCTGAACATTCCCTCCATCTTTTAAGAGGTGGAGATTATTTTTTATAAGAAAGTTTACTATTATTAATAGATATTCTAACCTTATTAAGGTAAGGTGAAACCCAAAATATTATTATTATGATATAGTTAATTAAGAACACTACATAAAGAAAAGAGGAAAAATCATGTCAGAATGTATATTTTGTAATTACAATAAATCAGAGATAATAGCAGAAAACAAATACACCTTTGCTATCTTAGATCACTTCCCAGTAAATGAAGGTCATTGTTTAATCATACCTAAGAGACATTTTATGAACTTTTTTGAGGCAAGTGAAGAAGAGGTTAAAGCCATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGAGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //