Array 1 58-285 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSOT010000176.1 Virgibacillus salarius strain 720a NODE_178_length_324_cov_0.903553, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 58 32 100.0 33 ................................ AAGAATACATGATTGATAGCATGGTTAATCTCC 123 32 100.0 33 ................................ ATTAAGTTATACAGGCAAATACAAGATCATTGG 188 32 100.0 34 ................................ ATGACAGTAGCGTCAATCTGTTCAATGGGTTGCA 254 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 4 32 100.0 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ACATGAGTGCGTGGATTGAAATAAAAATCCGACCTCTTTAGCAACTGCCCTTATATCG # Right flank : TAGCAAGGGAGCGGATGCAGAGTTACAAAGTCTTCGCAC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 77285-78766 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSOT010000002.1 Virgibacillus salarius strain 720a NODE_2_length_133071_cov_65.840181, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 77285 32 100.0 33 ................................ AATGACATTAATATTGCGATACTGCCCTGTTCT 77350 32 100.0 34 ................................ TTAAAATGAAGGTGCTTTTTACTTAAAGGAATGA 77416 32 100.0 35 ................................ ACTTGGTAGTTTTTAATGAATCCCGTCTCTGCATC 77483 32 100.0 34 ................................ TGAACGTTTTAAAGACCTTTTTACATATATCATC 77549 32 100.0 34 ................................ TTTTTATCAACGCCACGATATAATCCTGGTTGCC 77615 32 100.0 34 ................................ AAAGAAACTACAGGGATACCGACTTCGACATAGT 77681 32 100.0 34 ................................ GTGGAAATCCTGCGCTATTTTATTCGCTAGCTGC 77747 32 100.0 34 ................................ CAACCATTGTGACTCGGTTTAACTCGCCTAAGCC 77813 32 100.0 35 ................................ AAAAATCCGACCTCTTTAGCAACTGCCCTTATAGC 77880 32 100.0 33 ................................ AAGAATACATGATTGATAGCATGGTTAATCTCC 77945 32 100.0 34 ................................ CATTGAACCTCGCTGAAAGGCAGGCAAAGCCACC 78011 32 100.0 33 ................................ ATTAAGTTATACAGGCAAATACAAGATCATTGG 78076 32 100.0 34 ................................ ATGACAGTAGCGTCAATCTGTTCAATGGGTTGCC 78142 32 100.0 32 ................................ TAGCAAGGGAGCGGATGCAGAGTTACACAGTC 78206 32 100.0 34 ................................ ATTAGAACTAATTAACAGTACACCGGTTAGAAAA 78272 32 100.0 34 ................................ ATAACATACAGCAAGGCAATCGTTGAAAAATTGA 78338 32 100.0 34 ................................ ATTGATATCAGTATCGAAAAAGTCCGTATCCTGA 78404 32 100.0 35 ................................ TAACCTCATCTTGTTTAAACCAACCGCCACGGATA 78471 32 100.0 35 ................................ TAACCTCATCTTGTTTAAACCAACCGCCACGGATA 78538 32 100.0 35 ................................ TCATTTGCCTTTAAATCAATTCGTATGTCATCTAC 78605 32 96.9 34 ..............A................. ATTTCTTCATTAAAATTATTCTGAATTATTTTAG 78671 32 100.0 32 ................................ TTTCCCAAAAGACCCGATATAGCCAAACGAAC 78735 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ =================================== ================== 23 32 99.7 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TAGATGAATACCCTCCTTTTATGTGGAAGTAGGTGAGTTTATTTGTTAGTTTTAGTTACCTATGATGTTAATACAACTAGTAATGGAGGAGCGAGAAGACTCCGTAAAATTTCCAAAATTTGTCAAAATTATGGACAACGGGTTCAGCATTCCGTATTTGAATGTGTTGTTGATGCAACACAGTATACCACCTTAAAGATTGAATTATCTGATATAATCGATCGGGAGAAGGATAGTCTCCGTTTTTATCAACTAGGGAATAATTACAAAATGAAGGTGGAGCATATTGGTGTTAAGGATTCTATTGATATAGAGCAACCTTTGATTTTTTAGTGCGAATGTGAAGCAAACATGAAACCCCTAGATGATTCGCACCATTAAAAAGTGATTTTTTTTACATTTATTTCTATAAATGAACAGGTGTTTTATAACTTATAGAAAAATAGCGTTATTTTGGTTTGTTTTTTAACAATTATTGTAAATAATAACCATAATTCGCA # Right flank : TTAATGAGGATACAAGGAACAGGCAGCAATTAGATGTGGACATGGAGATTTTTTATCTGTAACAATTATGAACAACTCACGTCAAGTCTATTAGTCAACCACTTATTTATGTGAATTCACTAGATAGTCTAGTTGTTGCTTCAAGGGGCATTACGTAGGCTTATTTTAAAAACATAACAATAAGTTGTAGATACATAAATAAAAGAACATATGTCATGCCATAATTCTATAAAGTAAATAACTATGATAGAGGTGTCTAACGTCATTTGAAATAGAATGAAAATTAAAAATATGTTCTAATAAGTAAAGATATTTGTTATCTTTAATTTATCCCACATATAACTGGCAGTAAGACCCTCACTTCAAGCATTAAAGTAAAACCAATATGGATAAGGTGGATGATCGACTGCCAGTAAATGTCCGATTGGTTTAAAGGCCTTTAGGTACCCTTTAGATACTATTAATCCGTGAGGGGTAAACAAAACCCACATCGATTGAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //