Array 1 68109-69926 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALUW01000002.1 Streptococcus agalactiae GB00955 ctg7180000005153, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 68109 36 100.0 30 .................................... AGAGGTCAAAAACTCATGGAAAAACCCGAC 68175 36 100.0 30 .................................... ATTCTTATTTATTTTACGCTAATAAGAAAG 68241 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 68307 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 68373 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 68439 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 68505 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 68571 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 68637 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 68703 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 68769 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 68835 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 68901 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 68967 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 69033 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 69099 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 69165 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 69231 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 69297 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 69363 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 69429 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 69495 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 69561 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 69627 36 97.2 30 ........C........................... TACTTGACGAATTGAAGATGACGGAATTTA 69693 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 69759 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 69825 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 69891 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.9 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //