Array 1 138792-140207 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMDL01000001.1 Marinobacter litoralis strain Sw-45 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 138792 32 100.0 34 ................................ TGGTGACGCTCTACGGCGTCATGTGCTGGCTGGT 138858 32 100.0 33 ................................ AATTCGCTCGGAAACGAGATCAAGCTGGACGAT 138923 32 100.0 33 ................................ CGGCGATGGGAGGATCTATCACAGACACGCTGC 138988 32 100.0 34 ................................ TCGATTGGTGTATAATGGTACTAGCTCAAGTCAA 139054 32 100.0 34 ................................ TAGCGATACGGTGCCAAAAGGCTCAGCTCCGATC 139120 32 100.0 33 ................................ AGGGTTCCGACCTTGTGTCGTATCTGACCCCTC 139185 32 100.0 35 ................................ GGGTTTTATCCATCCAAGATCACAGACGATAAAGG 139252 32 100.0 36 ................................ GATACCGAGAGTTACGTGCAGCCACTCATGGCGCAC 139320 32 100.0 35 ................................ TCGGATTTCTGTGAATGACTACACCCTAGCAGGGA 139387 32 100.0 34 ................................ AGGCTCAGATTCTCCAGTATTCCGAGCGTTCAAC 139453 32 100.0 34 ................................ TCCTACAAGTTGCCAGTGCTTGAAAAAATCATTG 139519 32 100.0 34 ................................ AGTGTAGCCTCAGCCGGATTGTCTGACCGGAGCC 139585 32 100.0 34 ................................ ATTTTCGTAGATGTTGGCAAGTGCCACAGCCAAA 139651 32 100.0 35 ................................ TCCTGTCCGGGTGTTATTTTAGAGATGTTACGCCA 139718 32 100.0 34 ................................ TATTTACCATGAGGCTACCCCTTATGTTGGTTTT 139784 32 100.0 34 ................................ TTGTCGTAATTGGCGGTTGGCGCTTTGGTAGGTT 139850 32 100.0 34 ................................ TACGATCTCCTGCAAGCGCAGGACGGGAGCACAC 139916 32 100.0 33 ................................ AAGCCGAGACGTTAACAACTACGTGGCGGTCAC 139981 32 100.0 33 ................................ ATGAAAGGCCCTTTGTACGGCTTTATCTGGCAA 140046 32 100.0 34 ................................ TCGGCAACCTGAAGCGTGACGGCCTGATCGCCAA 140112 32 100.0 33 ................................ GCCAAGACCACGCACAACGGCCAGCCGTGCGGC 140177 31 96.9 0 ......-......................... | ========== ====== ====== ====== ================================ ==================================== ================== 22 32 99.9 34 GTCGCGCCCCCCGCGGGCGCGTGGATTGAAAC # Left flank : GTGCGTTATGCGATAGGAACAGCCCACTATGATGGTTCTGATCACCTACGATATTTCAATGGAAGATCCAGACGGGCCTCGGCGCCTGAGGAGAGTAGCAAAAGCATGTCTGGATTATGGTGTGCGGGTTCAATATTCCGTATTTGAATGTGAGGTTGATGCCGCTCAGTGGACGTTTTTCAGGGACGAGCTATTAAGTCTGTATAACGAAGAAAAGGATAGCCTCAGATTCTATAAGTTAGGTAAAAACTGGAAAAGTCGTATTGAACATCACGGAGCAAAGCCCGCTCCAGATATATTCCGAGATGCGATGATTCTTTGATCGCTAACCGTTAGTGCTCCTTAAAATCCCAGGATGTTAGCGAAAGACCAGAGCCTAGATGGTGCCTGGCCTTTTGTCTTTTTAGTGCTTTTCTGTATTGCTGCCTATTCATATTGTAAAAGGTGTTAGCGGAAATACAGGAATGGCTCCTTCGAACTCAATAAGTTACGCTAGAGCA # Right flank : CAGCGATGGGAGCGCGAACGTCAAAGCGAAGAACGTCGCGCCCCACGCGGATTGACATGTCCCTTTAAACAACCTTTGGGCTTAGGTTTTCATTTTGGGAAGAAGCTTGTCGATCGATGGTGTGCTGAACAACTTCAGTGTGAGCCGGTAGATTATGCTTTTTTTACTAGAGTTCTCGAGACAGCGAGGTTTGATGATCGTTATCGGTGGCCGGCCGTTTTAGGGAAAAGGAGGGCTTTGGGCGTAGCAGTTCGTGTAACCTGAGGTTCCTGTAGCGAACCGTAGGTTGCCAATAAGCGGGGCGAGGCTGAGTGCCCCGTTCCCGCCGATCTGTTTGGCCATGCTTTGTAACTTGCTACCGATTAAGAATCTTGGCTGCGAAAAGCTCGCCCTAGTTATCATCCAGATGCTTCCCCAGCATGGCGTGGTAAAGCTCCCTGTCTCCAATAGCCCCTGTGATTTGTCCGCCTTCTTCAACCAGCAGGCTGTGGCCGGTGAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCCCGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.70,-7.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //