Array 1 16112-17185 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZDF01000039.1 Prevotella copri strain iT2213 NODE_38_length_20738_cov_49.2584_ID_75, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16112 30 100.0 35 .............................. TACAACCAGTAGCAGCATGCGCAAACGTCTGCTGA 16177 30 100.0 35 .............................. TACAACACCTGACCAGTCAGCATGATGCCAATTTC 16242 30 100.0 36 .............................. TACAACAGTTTGCTGCATGCCGAGTGAATCAAATTC 16308 30 100.0 35 .............................. TACAACTCATCTGCTACCGATAAGCGACGTGTTGG 16373 30 100.0 35 .............................. TACAACCCTTACAAGAAAAAGTAATCATTTTACAA 16438 30 100.0 35 .............................. TACAACGGAAGTGCAACGGCCGCTATTATTTCGTA 16503 30 100.0 35 .............................. TACAACGTTTTGCAACGCTTACAGGTGTTAGCGGT 16568 30 100.0 36 .............................. TACAACACCCCTCACAATATATAAATAAGGTAACGA 16634 30 100.0 36 .............................. TACAACAGGACGGCAGTTAAACAACTCAGGCGCAAG 16700 30 100.0 35 .............................. TACAACACCCATTTTTCACTGTGCGCTACACGGAA 16765 30 100.0 36 .............................. TACAACTTTTTCCTGCCTCGTTAGTCCATCCTCAAC 16831 30 100.0 35 .............................. TACAACCGACAACGAAAAGTTTAGATTAAGAAGAA 16896 30 100.0 35 .............................. TACAACGTCATATTTGCAAAGTTAAGATAATACAG 16961 30 100.0 35 .............................. TACAACAGTACATGAAATAGGCAACAACATGCCAG 17026 30 100.0 35 .............................. TACAACACTTATTCAAAGACCACTCATTTTGTTGG 17091 30 100.0 35 .............................. TACAACGCAAAGTTCCAAAAGTAACACCATCTTCT 17156 30 96.7 0 ..........................T... | ========== ====== ====== ====== ============================== ==================================== ================== 17 30 99.8 35 GTTGTGGTTTGATGTAGGAATCAAAAGATA # Left flank : ATATTATTCTGGAGAAATAAAAAAACTTTCCTTACCTATTATGACATGACTGAAGATAGACTAAATGCTTATCATATAATGTGGTTATTTGTGTTTTTCGATTTACCTGTTACTACGAAAAAAGAGATGAAGGCTGCTTCTCTTTTTCGTAAAAACTTGGAGAAAGATGGTTTCTCTATGATGCAATTTTCTGTCTATATCCGTCATTGTGCATCAAGGGAAAGTTTGGAAGTGCATGTAAAACGGGTAAAATCTTTGCTTCCGGAGGCTGGAAAAGTAAGTTTGTTAAGTGTAACAGATAAGCAATATGGAGATATCTATAACTTCTGGGGTAAGCCCAAAAGTATTAATAAGAGTAAAATATCGAAAAAAGTTATCAGCGAACCTATTCAATTGGAGTTTTTTTAGTACTTTTGCATTAGAAATTATATCCTACTCACCATTTCTTATTAGATAGAGTGTTTGTTATGCGCTGAAAATCAGTATGTTCAAATCTGTAG # Right flank : ATATTATATACACGAGAATGGCATAGGGGCTGGCGCAGTTTCTGAATATCTTGGAATATAGGCAAGAAAGAGTCTTGTTCTCCACGGACTTCAATCTTTTCAAAAGAAGAACGGAAAAGATAAAAGTATCTCTGTCAGTATATGATAGTGCGGTAAAATGTATTGAGGAAGTGGAATGTGGCAAAAGAACTCAGCAAAACTATTCTTCTGAACTAAGAAACACCATTTGCCCAATAGATAAGAAAAACAATGCTGATGTGACGATAAGGGCCAACACGCCGTAGATTGATTGGGGATTGTTGACACAGTATCCTATGCAGGCAACCCAAACAGCGAAGGACAAAAGGCTGTTGTCACCCAACGCTCATATTTCTTAGAGTGCTTCGGGGGAGTATCTTCGCCTACTACTTCAATGCTAACGATTTCTACCTTTATTTCATGTTCGGGCTTGTTCGATTCTTCGTTGTTGTTTGCTGCGTCTGATATGCTGTTGTTGTTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGAATCAAAAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATGTAGGAATCAAAAGATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //