Array 1 33984-35414 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNOL010000009.1 Klebsiella variicola strain K088 9_length=187433_depth=0.31x_circular=true, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 33984 29 100.0 32 ............................. GAAATCATGTAAAGAAGTCGCCCAGTCCAAAG 34045 29 100.0 32 ............................. TGAGAAGCCCCGCATTCCGGGGCTTATATAAT 34106 29 100.0 32 ............................. TAACTTTTAGGCTCCGTATCCCCTTCGGCCAA 34167 29 100.0 32 ............................. ACACTTATCCGAATCATTGCAGTGGTAGATTT 34228 29 96.6 32 ............................A ATGCGCTGGCGCGACTCAAATGCCCGTTTGGC 34289 28 89.7 32 .....-......CT............... GAGTTTGTGTTCCCCTGCGGCTGGGCGGCATT 34349 29 89.7 32 ............C..A............T TCGATGGCAACCACCAGGAACAATAAAACCCC 34410 29 89.7 32 .A..........CT............... CATCGTGCCCGAGTTTATATGTTGCGCACAGG 34471 28 79.3 32 ..G..-....T.CA...A........... CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA 34531 29 86.2 32 .....T......CA..............A TAGCGGCGGTGAAACGCTGGATTGCGGACAAG 34592 28 89.7 32 .....-......C..A............. CCGGAGGTGGAGACTATGAAAATGCCAACTAA 34652 29 89.7 32 ...........ACT............... GTTTCCGGGGCTAACAAATTTAACCGTGAGGA 34713 29 79.3 34 ............CTCAA.......T.... ATGGCGTTGAGCGGCAGTTTAATATTATCTGGCT 34776 29 89.7 32 ............CT.............A. GCTCTGAGGATGATATGCACCGGCACAGGTGC 34837 29 86.2 32 T...........CA.A............. ATGCTCGAACGGGTAACGAGGTGATTTTTCTA 34898 29 100.0 32 ............................. CGAAAACGGCAACCTTCATAAAAACGTCTGTA 34959 29 93.1 32 ............CA............... CGGTATCGAGCTCGCCGCCCACGGCCAGAATC 35020 29 93.1 32 ............C..A............. CGAATCCTCAGCGCGAGTCACGGTGACTGACC C [35025] 35082 29 96.6 32 .............C............... TGACTTTTAAAAAAAATCAGCTGAAACAGCCG 35143 28 89.7 32 .....-......CA............... AACAGTGGGATTTCACCTTTTAGGCTGAGTCA 35203 29 93.1 32 ............CT............... GTTCCCTGCACTAAGACGCTGGTGGTCGCCAA G [35220] 35265 29 96.6 32 .............C............... GACAGTCACTATGTTCGGTATGTTTAAAAAGA 35326 29 93.1 32 ............CA............... TTACTTTTAAAATAAATGTCTATATTGGCTCA 35387 28 82.8 0 ............CAC.......-.....A | ========== ====== ====== ====== ============================= ================================== ================== 24 29 91.8 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACTCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTACATTACTCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGAGACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCAGTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAACCGTAATGGTGGGGCTTTTGTCATGAGACCCTACAAGTAGATGGGACTAGGAAAGTTACTTTCTTCTGGAGAAGCGCCCACATTCCGCCATGTCTTGCAGGTTGCAATCAGAAAAGGCCTTACGACGGTAAATTCATGCCTTGGGCAGGTAAGGAAGTATGACGTTATAACTCTACATTTCTGGTTGATTAAGGCAGGGGGGCTTTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTCATCCCAACTGCTATCTGATGGACTAGGCACCTGCAAAGATTCAATTTATACTGTTTATATATACAGTGTTTTAGGTGGTCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATTGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATCCATCCGCAA # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //