Array 1 1770417-1769787 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXOH010000001.1 Pediococcus acidilactici strain IRZ12B Scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1770416 36 100.0 30 .................................... GAGTACTTTTGGAGTTAGTATCCGTTATAT 1770350 36 100.0 30 .................................... AAATGGAGCACAAGTTTTATTGACTGTAGA 1770284 36 100.0 30 .................................... CACGATAATTAATCCCGTCTTGATGCTCTT 1770218 36 100.0 30 .................................... TCAAAAGTGAACGTTTAGCGACCAATTAGC 1770152 36 100.0 30 .................................... ATCCGCTAGACCGCCAATTAAATCTATCGT 1770086 36 97.2 30 ........G........................... GATTGTAATTACTCCAGCACAGACAGAGTT 1770020 36 97.2 30 ........G........................... GGTTCCCTTCGTCGTCCTTAATACCTACTT 1769954 36 97.2 30 ........G........................... CAAGCACGGGGGATGAAGACAAATGAACAA 1769888 36 100.0 30 .................................... CGTTACAATTCCGTGCAACAGGGTTGAATT 1769822 36 97.2 0 ..................................G. | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.9 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAATATTTAACTAAGATTGAACGAGTTTTTGCTGAAGGGCTGGTGGATGAGCAGCGTAACCAAATTCACGATCAAGTTAACCAGCTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAGTTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTACACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTGATTGAATTCACAGAAATAGGCACTCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : GTGGCTGGTTAGTTTGGGTATCTAAGGGAGTTTTCAGAAGGGGAATAAAGTTAAATGGAAGTCATAAAAAAGAGCCAAACAAGAATGAAAGGTTAACAATATTACTGGCGGTAATACAAACCATAATAAGCACTCTAGATTGGCTCGGGTACAGTTTTAAGAAATAGGATTAAGAGACGTAGATCTTTTTTGCCGCTCTCTATATATATTTTATAACGGAGGAATAAAAAAATGAAAAGAGAAAAAGCAGTTAACATAGTTATTGTATTGCTGTTAATTTCAATCGTGTTATCTATTTTAAATCTATTTAAGTAGGTGTGTATCGTGAGTTTAATAAAGAAGCACCTAGATTCTTATAGGATTGCTAAAGATAATAATATTACCTAGCCAATAATGACAAGGGGAATTAATAAGGACTTGGATAACTTATCGTTTAAGCATCTTAAAGCTATCTCCACTTCCCTAGGAAAAGATATAGTAACTTGTCGCAAAAGAATTAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : GTTTCAGAGGGATGTTAAATCAATAAGGTTAAGATC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //