Array 1 1497991-1498808 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP085964.1 Campylobacter curvus strain FDAARGOS_1547 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1497991 30 100.0 35 .............................. ATAAACGAAAATATATCGCGCATCATGAAAACATC 1498056 30 100.0 36 .............................. CTCATGGAACGTAGCTGAAATATTATCCCCACCCTC 1498122 30 100.0 36 .............................. CAAAGGATTTTTATCGATTATTTCATCTTGCAGCGC 1498188 30 100.0 35 .............................. TCCACTCTCATTTTAAATGCAAGAGACTCTCATTT 1498253 30 100.0 36 .............................. AAGCTTGCAAGCTTTCTTAAAAGCTTCATCGACTGC 1498319 30 100.0 35 .............................. TACAACTATATTTTTACCATTTCTGACCGCTTCTT 1498384 30 100.0 34 .............................. GCCAACCCGGTGAAAATTTCAATACTTTTACAGG 1498448 30 100.0 35 .............................. CTAGCAATACGCCACTTTTGGGGCTTAGCCTAGTA 1498513 30 100.0 33 .............................. CCGCCATAGCTCTTGGAGCTTTTTTGCAATGCG 1498576 30 100.0 38 .............................. ATACATTTGACATAGGAGAATACAATGTTTCACATACG 1498644 30 100.0 36 .............................. TATGAGCATCCTTGTCATCCTCTGCCTTATTGCCTA 1498710 30 100.0 39 .............................. GAAAGATTGAAGCCAAAAATTTTTATTCAAAATTATACC 1498779 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 99.7 36 GTTTCAAATTCCAAAGAAATGACCTTTAAC # Left flank : GCATATAAAATTTTGCTTGAAAAATATAACGTGAGCCAAAAAAGCGTGTTTGGATATTTTCATTTCGGTGCGTTTTTCGTGACCCTAGCAGCGCTTTTGGCGTTTGGGAATTTTGAGCGGATGAACCCGAGTGCCACGCAGATTTTGGTCTTGCTTTGGCTTGGTATCGTGGCTAGCGGACTTGGGTATTATCTATGGAACAAAGGCGCTTGCGAAGTCGATAGCGGTGTGCTTGCCATCATGAACAACGCGCTCATCCCGGCCGCTATTATCGTAAATTTAGTGATCTGGCACAAAGACGCGGATCTTTTGAGGTTGCTTATTGGCGGAGCGATAATGTATGTTTCGCTGATGGTGCATAAAAAAATCGTGAAAATTTATGAGAATAGGGCGGTAGCGTAGGCCGGAATTTATGATTTTTGTTGAAATTTGCCGAGGCAGAGTAGTGAGTATAGTCTTTGGTGTTAAGGAGCGTATATTGTGGGTTTTGTTGGTATCTG # Right flank : TAGCGTATAAAGATAAAAATATAGGCCTATTAAAAGTCAAGGCCTATGTTTTTACTCCTTAAATCAGCTAATGTTTAAAATATTTGACGATTAGAAAAGAGCCAATACGTATTATCAAAAGCTTAAAAAACACTTCGATCGTCTGAAATTTAGGGGGCGTATCCCCCTAAATCATTGTTTATAAAAGCCGCTTGGTTTGCCGGTCAGATCTATCATGATATTTTTCATCTGAGTGTAGTGCTCTAGGATGATCTTATGCGTCTCGCGGCCGATACCTGAGTTTTTATACCCGCCAAACGGGCTGCCTGCAGGGATTTGGTTGTATGTATTTATCCAAACGCGCCCGGTCTCCATCGAGCGAGCTACGCGTAGGGCTTTCGTGATATCTTGAGTGAAGATCCCGCCACCTAGGCCGTATTCGCTGTCGTTTACCATCTTTAAAAGCTCTTCTTCGTTTTTAAATTTGATGACGACGCCGACAGGGCCAAATATCTCCTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATTCCAAAGAAATGACCTTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 1534922-1535213 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP085964.1 Campylobacter curvus strain FDAARGOS_1547 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1534922 30 100.0 37 .............................. CTAAAGATGAAGTTAGATCTATACTAAAAGAAGCAAA 1534989 30 100.0 34 .............................. AATTCTTTGGCGGGATAATATGCAGGATCATAAA 1535053 30 100.0 35 .............................. TACCCTGACAACTGCCGAAAACTTAAAACTGGCAG 1535118 30 100.0 36 .............................. TCCTCAAGGTAGATTATGAATTCATCTACGCTGTTG 1535184 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 36 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATTGATTTTTAAATTTCAAAGCATAGGAATGCGAACATCATTCTAGCAAAAGCATTGCACGAGCCTATCGTTGTCGATTTTTCTGTTTTTACTTTATCTTACTCAAACGCTGTTCGCATTTTTCTCTTTTTAAGATGCTTCACACTACGCTCGCAACCGTACACGCAAGTAAAGTAAAAAGATTTCTTTTAAATGCCATTTGCATACGCGCCGCACTTTGAAGCGAGTATTAAGATTTGATTATAGCAGAGCATATTTTTTACAAAAAACCTGCTTGATTATCTTATGCACAGGCTTGAATGCTAGTTTAATGCTTTAATTATTAGGGCGTTTTATAACAAAGAGTTTGATAAAACGATAATAAAGCTTGTTCTAAGATTTTGATAATGCCCTATTTTCTAGGTTTTTGCTTGCTAAAAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTAATTTTAATGGCCCTGGAATTTGATATTTTGGTGCT # Right flank : CTATGCACGCACATAGCCTTGAACTCTGACGCTACTTTGAGTTTCGAATTCCAACGGAATAAATTTTAACAAATAAGGATACGGGCACAGGTATGGGGCTTTATATCGCTAAAATTTTAGCGGTAGAAAAGCTTGGAGGGAGATTTATGCTTGAAAGTAGGGCGGATCCTACTAAATTTGCGATCTTTTTAAAGCCTGAAGTCGGGAGCGGACGATGTATAACAAAATAAAAGAAATTTTAAAAGATGTGAGGCTGCTTATAGTCGAGGATGATGACGAGCTAAGGGCGACTTTAAAGGACTCGGTAGAAAAATACGTAAAGCAAATTTTTGAGTACTCAAATGCCAAAGACGCGCTGGCGTGTTTTAAACAAAACGATATAAATTTGATCCTCTCTGACATCAATATGCCGCGTATGAGCGAGCCTCAATGCCATCACTCATCAGGCAGGACGATAAAAATGTGCCGATCATCTTTCTGACAGCTTACGATAGCGACGA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //