Array 1 748952-748191 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZG01000002.1 Nonomuraea pusilla strain NBRC 110462, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 748951 30 93.3 30 .............A..............G. CCTGGGCGCGGCGGTTGCTGCGGCGGCGGA 748891 30 100.0 31 .............................. AGATGCTCTTCACCAAGAACAAGCAGGGTCG 748830 30 100.0 31 .............................. GCGCGTGGATGTCGCTGGACGTGGCGGTTGA 748769 30 100.0 31 .............................. AGCGACACGACCGACGTCGTCGCGACCCTCG 748708 30 93.3 31 .............A..T............. TCGTACCCGGGGTCGCCCGGCCCCGGGCCCG 748647 30 93.3 31 .............A...............A CTGAGCCACGGAGGACCCGGCCCGGCCTGCC 748586 30 93.3 31 .............A...............C GCATGGGTGCGGCTAGGGGTGGTCTTCTCTC 748525 30 86.7 32 .............A...........GT..C TTGTCGGTGCGCAGGTCGCAGAACCGGTACTT 748463 30 90.0 31 .............A........G......T TCGAGCCGCGGCGGGTGAGGAAGGCCAAGCG 748402 30 96.7 31 .............A................ GGATCATCATGGACAGGACGTGCCAGCCGTC 748341 29 90.0 31 .............AG.......-....... CTGAGCAGCAGAGGCGGCGCCCGAACCTGCG 748281 30 93.3 31 ......T......A................ CCGTCGCCGCCGCGCACGCCCCGCAGGACAT 748220 30 86.7 0 .............AT....A.........C | ========== ====== ====== ====== ============================== ================================ ================== 13 30 93.6 31 GTGCTCCCCGCGCCCGCGGGGATGGTCCCG # Left flank : CGTGAGCACCTCGACCAGTTCGGCACCGGCCCCGAAGGCCGCATCTTCATCGGCCCCCGCGGCGGCCTCATGACCGACCGCGCCTACCTCAAGGTCTTCCACGAAGCCAGAGCGAGAGCGTTCACCGAAGCAGAAGCCACCTCGCCCCTCCTGGACGTCCCGTACGCCCTACGCCACGCCGCCGTCTCCACCTGGCTCAACGCCGGCGTCCCCGCACCCCAGGTGGCGGAATGGGCCGGCCACAGTGTCAACGTCCTGCTCCGGGTCTACGCCAAATGCATCCACGGCCAACAACACGACGCCATGCGCCGCATCTGGGAAGCCACCAAGCCGGGAACGACGACAAGCTAGGTTGGCCCTGCCATAGCCTGACCAAGAACCGCGCACGGCCACCAACGACAACCGGAATGACAAGACGAGGCCCTTGCCCGAAATGTCCGAGTCTTCAAAAACTGCTCCAAATCACCGCCTGCCGCCTACATCACCGCAGGTGAAGAAGA # Right flank : CGTCGTAGCAATGGATCTTCTGACCGATGGGGGCCGGTACCCGAGAAGAAGGGCGGGGCCGGCGGGAAACTTGGCCGCGTATTTGCCGCGGAGGGCCGTGGGTCCTCGGTGATTACCATCGACGGCCGGACACAACGAGAGAGGCCCTTCACCGCGTTTCCGCTGGTGAAGGGCCTCTTTCTGCTGGTGTGGCAGGTGCAAGGTTCGAACTTGCGTAGGCTGAGCCGACGGTTTTACAGACCGCTCCCTTTGGCCACTCGGGCAACCTGCCTTGTCTTCCGCTCTCGCGGCGACACACAGAAGAATAGCGGACTTCCGGGGTGCGCGTGACACCGGTTTGTCCCGTGGCGCCGATCTGGATCCCTCGTGGCGCGGCGACGTGGGGGTTCGGGGGTGGGCGGGGTGTGGAGATCGTTCGGGGGGATCGTCCGCCGGCTCCGTGTCCGCCGTGGGCGAGCGCGTGGGGCGTGTCCTGCGCGGCGCGCCGATGCTGGCTAGGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCCG # Alternate repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 552884-553773 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZG01000004.1 Nonomuraea pusilla strain NBRC 110462, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 552884 30 100.0 38 .............................. GTGGATGGCTGCGTGGCGGTCGTGGGCATGGGGGTTGC 552952 30 100.0 32 .............................. CTTCTGGGGCTACTGGAAGTTGCAGCGGAGGA 553014 30 100.0 38 .............................. TCTACTGCGACACTGCACTACTGCCTTACTGCTTCCCT 553082 30 100.0 36 .............................. GCGGCGGCGCGGGCGGGAGCGGCTCGGGCGGCACCG 553148 30 100.0 33 .............................. GCCAGGTCCGTCACGAGGTGGCGCATGCGCCGG 553211 30 100.0 35 .............................. TGCATGGCCTCGATCGGGCGGGACCTCATCGGCCG 553276 30 100.0 36 .............................. CTCTGGCACCCAGTGGACCGACAGCGGCAAGCCGCG 553342 30 100.0 36 .............................. CGCGGCCGGGTACAGCTCCAAGAGCCTCGCCGCGGC 553408 30 100.0 36 .............................. TAGTACTTGGCCAGCGTGCCGAGGTCGAATGGCTCG 553474 30 93.3 35 .....T...C.................... AGTCCGGCCAGTACCGGCCTGGCGACCAGCTCCCC 553539 30 100.0 36 .............................. GCCTGTTCCTGGTATTCATGGCGATGTCCATCTCCA 553605 30 100.0 39 .............................. TTTGAAGCAAACCCGAGCAAACTCCTTGGGTTTGCTCGT C [553619] 553675 30 100.0 39 .............................. ACCGCAAGCAGCGCCTCCAGGAGATGGACGAACGCCGCC 553744 30 96.7 0 ................T............. | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 99.3 36 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : GGGCGGCCGAGGGGTGCACTTGGATTCGAGCTCTGGCGTGGTCCACAGCTGGTCCACGGGCGGTGAGTGTCAATGAGAAAGGGCGGGACTCCGTGAGAGTGGAGGCCCGCCCGTTCGTACGACGTTCGCTCTGGTCAGCGGACTGAAGCGCTGGTCAGGATCTTGTGCCCCCTGCAGGATTCGAACCTGCGCGCCCGGCTCCGGAGGCCGGGCACCGTCATCGCTTCTACCAGGTGAAATACGAGGTACGCAGGGCAGACGGTACGCTGCTCGTACGTGATCATGCTTAGATGCCTCCCCGCCCAGCCACTCCAAGCGGTCGGTGTAAGGAATGAGCAACGGGGGGACGGACTAACCTATTCAACGGCTCTTGCGTTTCTCATGATCCACAATCAAGTTGCAGCGAACCTCCGGGGGTTCATGCACAACCGGAGGTTCACTGCAATTCGAGCCAGAACTGTGCCTCTACAACTGGCCGCTACCTGCAGTTTTACTCTGGG # Right flank : CCATGTGCTTGGCCGGGGAGTGGCCGCCGAGGGAGTCAGCCGCAGTATTCGCATTATCGGCACATGGCTGAGCGTCTGACCTTGTGCAGGTCAGATGCCCGGGCAGTACCGCTGGGGAAGTAGTCGCAGAATGCGCCGTATTCCGCAGAATCAAGGTCTCGCGCAGTTACTCTTCGGGTGCGGCGTGGTTGAAGACCAGTTCGACACGGTCCCCGCGCAGCACCCTGCGGTGCTTGCGAGGGCCTGGGATCACTTCGAAGACCGGGACGCCCTCGGGGACGCCGCCGAACTCGCGTAGTTCCTCCGGCGTGGCCAGGTCGCGGCGTTCGTCCGGCGTGGGCATGCGGGTGACCACGCGCGCCCCGGCCGGCACCTCGTACGGTTCCCGGCTCGGTTCACCGACCACCAGCGACCCCCGCTTGCGTACGGTCGTGATCCGTCCCTCGGCGCGCAGCAGGGCCAGGGCGTCGCGCACCGTGTCGCGGCCCACGCCGTACATC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 567331-565827 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZG01000004.1 Nonomuraea pusilla strain NBRC 110462, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 567330 30 100.0 42 .............................. AGGGTGCAGGAAAGCCTGAACGGCCAGCCAGGCAATCAGGTC 567258 30 100.0 38 .............................. CGTAAATGGATCTGTGTCTATATGAGGGGGTAGTCGTC 567190 30 100.0 43 .............................. AAGCAGGCACAGTCCGCGCCAAGGACGCCCCCGCAGTCTTCAT 567117 30 100.0 36 .............................. TACGCCACGGCAACGCCAGCCTCCAGGCGCTCGCGG 567051 30 100.0 34 .............................. GCGAACAGCGAACTCTGGCCGATGGCGGCCCGCT 566987 30 100.0 37 .............................. AGCGCCTTGAACAGGCACTCAGGGAAGTACGTGATGA 566920 30 100.0 37 .............................. AGTGAGTCCGCGGAAGCGGAACACCTCGTTGTGTTCG 566853 30 100.0 33 .............................. AGGTAGTGGCCGATGGTTTTGGCGAGGCTGTCG 566790 30 100.0 36 .............................. TTCATCATGAGTAGTGCAGCGCCAGATGCCGCACCC 566724 30 100.0 34 .............................. ATCGTGTCGCCGTCCACGATCTTGACGACCTTCG 566660 30 100.0 34 .............................. ATGTACGGCGGGAGCCCGGCGGTGCCGTCCGGCA 566596 30 100.0 40 .............................. CGAGCACGGAGCAGCCCGTCCCGGACCCGCCGGTGGTGCG 566526 30 96.7 34 .......................C...... ACCTGCTGCAGATGGTGTGGGAGAACGGCGGCAT 566462 30 100.0 37 .............................. AACGCATCCGTGCTGACGGGCAGGTCGGGGTGGCCGG 566395 30 100.0 32 .............................. GCCAGCAAGGACGACTACGGCGTCCCCTTCAC 566333 30 100.0 38 .............................. TTGACGGCCTGGGCCTGGTGGCGGACGGCGGTGAGGGT 566265 30 96.7 42 .......C...................... CGATGGGCGGCCCTGGGTCTCCTCCTGGGACGGCAACCCCGA 566193 30 96.7 39 ...................C.......... GCGCACAGCCACGACTTACCGCTCTTGTCGCCGCCCTCG 566124 30 100.0 36 .............................. AGTTCTGAGGCGCAGGCTCCGCAGATGCGGGCCGAG 566058 30 96.7 37 .................C............ TAGGCGTCGGGCGCGCCGTCGCGCCGGTACCAGCGGA 565991 30 100.0 36 .............................. AGTTCTGAGGCGCAGGCTCCGCAGATGCGGGCCGAG 565925 30 96.7 39 ............G................. CACTTCGGACAGGTGCCGGTCCTGACGTAGAGCCAGCCC 565856 30 96.7 0 .......................C...... | ========== ====== ====== ====== ============================== =========================================== ================== 23 30 99.1 37 GTCTTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : TGGCTTACGACGAGCTGCTCTATCTTGAGGCCCTCCAGCTCACGCGCACTTGCCTGGAGGGCACACCGTACAAGCCGTTCAAGATCTGGTGGTGAGGATGTCATGTACGTGGTGGTCGTCTATGACACCCTGGCCGCGCGCAATCCAGCCATCCTGCGCCTATGCCGGCAGTACCTGCACCATGTCCAGCGCAGCGTGTTCGAAGGCGAGTTGAGCTCAGCACAGATGCGGCGGTTCCGCCACCAGGTGGAAGGTGTCATTGACGCTGGCTATGACAGCGTCCTCGTGTTCAGCTTTCCACCTGGAACGAGTCCGGAGCGGCAGGAATGGGGCATCGCTCAGCCTGCGCCCAGCGACATCTTGTAGTCCCCAGGCAGTTATTTTGATCATGAAGTTGCAGCGAACCTCCCGGTGTTCTCGCACAACCGGAGGTTCACTGCAAAATAGGCTCACACAACCCCCGCAAACCTGCCCGCTAGCTGGGACTTTACCCTGGGGTC # Right flank : TCAGCGTGATCACCGCCGTGCTCGGCGTCGTCATGTCTCGTTTGCGGGATCGTGGTTCCCTTCGCAGTCCATGGCGTTTGCTAGAGCGTCGTCGAGTATGCGGTGCCAGACCTTGTCCTGTCCGTCGATGCACTTGGCGTAGATCTTCAGCAGGACTTCTACGCTGTGGCCGGCCCATTGGGCCACCTGCGTAGCCGGAACGCCGGCGTTGAGACGCATGGACACGCCAGCGTGGCGTAGGTCGTAGGGCCGCTTCGCCAGTGGGGACGCCGCCTGCGCCGGCGAAAGGGCGAGTTCGCGGGCGGTTTTCCAGGTGCGCGCGTAGCCCGACTTGTGGAGGGTGCCGCCGCGCTCGGTGCGGAAGAGCCGACCGTCCGGGGCGACGCCGTACCGCTTGATATGAGCCCGCAGGATGGCCACGAGCTGGGGCGGGATCGGGATCGAACGCTTGGCTTTGCGCGGGCGGCCCTTGAGCCCGCGCTCCTCGTGGACCTGTCCGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 575843-576863 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZG01000004.1 Nonomuraea pusilla strain NBRC 110462, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 575843 30 100.0 33 .............................. AGCACTGCGACCTCTGCGGTGACGAGGACATCC 575906 30 100.0 39 .............................. GCCATGATGGGGGTTGCCTCTCTCTTCGCAGGGATGGGG 575975 30 100.0 36 .............................. GTGGATGGCTTGCGGGTCCTGGACTCCAGGATCTCC 576041 30 100.0 36 .............................. GCTGCCTGATAGGCGGCGGGCAGCGGGGCGTGGGAG 576107 30 100.0 35 .............................. ACGCTGCGCTGCGCGTCTATGAGGCGAGGTCGCGG 576172 30 100.0 37 .............................. CCGAAACGATCTCTTCCAGCGGGTCGTCCGCCCACAT 576239 30 100.0 38 .............................. AAGTAGACGTAGCAGAACGGCTCGTGGCTGGTGTTGTA 576307 30 100.0 34 .............................. CCGAAGGAGGAGCGCCTGGAGGAGGCGCTCGGGA 576371 30 100.0 36 .............................. GCCACCGAGCGCTGGACGCCGATGCTGGAGGCCGAC 576437 30 100.0 34 .............................. TTCGGCGAGCTGGGCGCACCCAGGTTGGTCAGCT 576501 30 96.7 38 ....................A......... GTTGAGGTGAGGCCGCCGTCGCAGCCGAAGGTGAAGCG 576569 30 100.0 36 .............................. GCGAAGACCTTGTGCTGCCGCCAGCACAGTTCGGCG 576635 30 96.7 38 .......................C...... ATCCACGCCGCCTCCCATGCCTGCTCTGGCGAGCACTC 576703 30 100.0 34 .............................. AGCACGTCGACCTGGGCCAGTACGGGCCGCAGCA 576767 28 86.7 39 .................--......A..G. AGGTCCTGCACTCGTCCTGGGGGTGGGTTGCCCGCGACG 576834 30 90.0 0 ..........T.....T...........G. | ========== ====== ====== ====== ============================== ======================================= ================== 16 30 98.1 36 GTCGTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCGAGCCCCCAGCTCTCCAGCTGTGCTGGCCAGCAGGTCATAGGTGACGCCTCTTCCCGGGGCCAGCACGCTTTTCCACGGCAACTCCGAGGCCGATGTGGCAATAGCCACCCGCAGTCGCATCCGCACCTCCTCCTACGCAGGGCCTGCCGCTGCGCTCCGACGATAGAGAGCGGGACCGACAGATTTCCTACGTTCCACGAAATGCACCAAAAGACCGTTATGTGCCCTAAGGGATGGCTATTGCCTGAGCAGCCGCCCTTGACTCCGTGTGTGCTACGCCGACTGGGACCTCTTGTGTTTCTGGCCGTGGTATCTGCAGCATGTTCAGTGCGCGTGTTGGGAGGAACGTTGATCCCGGCACTGATACGGAGGCACTCCACTGTTGATCATGAAATTGCAGCAGACCTCCTGGGTTTCCTGCACAACCGGAGGTTCACTGCAATTCGGCTCTGGAGAGCCCCACCAAACTCCAGCCCGAGCTGCGGCTTTACCCTGGG # Right flank : CATGCGGGAGGCTGCGTTGAAGATCGGTACGTGGGTGGTACGTGATCATGGGCACACCGTTGCTTCGGGTGGCATCCGGTGGCACAGGCGGAAACACGAAGGACCTGCGTCGCCGCAGGTCCAGGTGCAAATGCCGATGTAGATCGTGAGTGCCCCCTGCAGGATTCGAACCTGCGCGCCCGGCTCCGGAGGCCGGTGCTCTATCCCCTGAGCTAAGGGGGCGACGAGTGATAAGGCTATCAGCATCCGGGCACCACTCCGCACACATAAAGGTCCGGGAACACATCCGGGGAAAGTCCGGCGGCGGGTGCCTTCCACGCGTTACCTTGACGGCCGTGGGCGACGTTCTTGGCAAAGTTCTGGTCGTGGACGACGACGAGGTGATCCGCCAGCTCATCGCGGTCAACCTGAACCTTGAGGGGTTCGAGGTGGAGACCGCGACCGACGGGCAGGACTGCCTCGATCGCGTGCTCGACGTCATGCCCGACGTCATCACGCTG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //