Array 1 64822-64397 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAQW01000012.1 Bacillus sp. FJAT-27264 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 64821 32 100.0 32 ................................ CTCCAGCATACAAATTATTTCCAGACGGTATT 64757 32 100.0 32 ................................ CGTTATTAAGGTATGAATCTAAATATGATTTA 64693 32 100.0 33 ................................ ATTCCAGATGGCATTCTTTTGTGTTTGCATCTT 64628 32 100.0 35 ................................ CTCTCCTGCTCTGCTTGGTAGTACGCTACGACATC 64561 32 93.8 35 ........C....G.................. TTCTGCTCCTTTGTCTGAATGTATTTAGCGTCGAT 64494 32 96.9 34 ........C....................... CGTCAGGATTTGCGCATTTGCTGAGTCTGACTCC 64428 32 81.2 0 ........C.G..T......AAC......... | ========== ====== ====== ====== ================================ =================================== ================== 7 32 96.0 34 GTCGCTCCTTACGCGGGAGCGTGGATTGAAAT # Left flank : GCGAACCTTTACGATGTACAGCAAATCATGCTCAAGCACGGTGCCGTAATCGCAGCGAATCTGGATGGCGGGTCCTCGACAGTTCTCGTCAAGGACAACGAGATTATCAACAAACCTTCTTCGCAGTACGGTGAACGTTATCTGCCGACCGCGTTTCTGGTCTTTGATCATCCGGATCAGGTAGATATTCCGAATATCTGGAAAGGTCTGGACCCTTCCAAAATCGACGCGGCGAAGAAGCGGACAAAATAGTAGGGTTACAAGAATATTAGATTACGCTCCCGCATGGGGTGTGACAAGAGATCGGAGGGATGCCTCCGGTCTTTTTGCAGTGCGAACCCCAAGCTCACATGAAATCCCTGGGGGATTCGCACCAGAAATATTACATTTTATGTATAAAATATTGTCTCTAAAGTAATTGACGCTATGAGTTTTGCGTATTAAAGTAATTTTAGAGATGTTCCAAAAGAGATTATGCTCTATTTAAGTGTTTATTCGCT # Right flank : GATTAGGATGCAGATGCATCTCCACTCATTGTGTTGCTCTACCGGGGTTCAACTACTTTCATACTTGCCCCATAAACAACTATACAGAACGCATTAAAAAACAAACTTAGCCAAGAAAAAAGAGAGCTTGTATAAGAGAGATCGAAGTGTAATTAACAGCATTTTTGTACCTTAAATCCTCTGAAGCTAAGGGTTAGTGGAGATTAAGTGCAAAATTGCACCTTAAATCTTCCAGAATCCCCCTTCTAGCGCGCTTTTTAGAAAAATAAGATACAATAATGTCCTTAATTCCCTCATTTGCCTATATTAAAGAAATATAAGGTACAAAATTGCTCTTAGTTGGGGAGGTTGACGATTTCTGCTGTTAAGTTTACTGCTTTTTATCACATACAGCATCCTATTTCACATGTATCAGTGCAGCACGATTAAAAAAGTATTAAACTGGTAACGTCCCATTAGGCAAACGGGCAGTATTGCGACAAACAACGCATCTGCAACAT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTACGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 740721-742768 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAQW01000023.1 Bacillus sp. FJAT-27264 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================================================================== ================== 740721 31 100.0 33 ............................... ATTGAACAAGTCAGTACGATTGATGCAGTTAAG 740785 31 100.0 36 ............................... TGGCAAAAAGCTTTGCTGCACCTTGCAATCACCCCG 740852 31 100.0 39 ............................... GAGTTATCGGCGGTCAGGTCGTCACAGGATTCCATACGG 740922 31 100.0 34 ............................... ATCGGGATGCTGCTTTCGGCTTGCCGCGTACTCG 740987 31 100.0 35 ............................... CGTCTTACTATAATCCTGGTCAGGCTAGTCCCGTG 741053 31 100.0 35 ............................... ATCCGAGGTACCTCCTAATTTGGGCGTACTTAAAG 741119 31 100.0 36 ............................... AGTTTGATGAATACTGCTGGAGCAACAAGAAACATG 741186 31 100.0 36 ............................... ATCATAAAAACAGCCGATGATGCTCCGGTATTGGCG 741253 31 100.0 34 ............................... TTCCATCAGCTACTTTAATGCCGTTAACTTTTAG 741318 31 100.0 35 ............................... AAAGCCTGAACGGCAGAGACCCCATACGTTACATG 741384 31 100.0 36 ............................... TTCCCAAGATACCGTTGATGAGGACTGGGATGCCAG 741451 31 100.0 36 ............................... ACATCAAAACAAATGGATGGAGCGCTACCGGTCAGG 741518 31 100.0 35 ............................... TTGGTGTACGGATCATATGCACCACTGATATACAG 741584 31 100.0 34 ............................... ACCTCAAAATCATCGCTTTATTCTGGATCGGAAG 741649 31 100.0 34 ............................... AGGAAAAACTCGGTTTTCACTTGAAATCAACATG 741714 31 100.0 36 ............................... AACTACACTCACTAAAGTCGATCCACCTGAAGACAG 741781 31 100.0 35 ............................... TGGCGCTAAGGGCGATCAAGGTCCGAAGGGTGACG 741847 31 100.0 37 ............................... ACGGATAAACTCATCAAATATAATGGTGGTTACATTG 741915 31 100.0 34 ............................... TTAAAATACCAACCCAACTATTATTTAAAAAATG 741980 31 100.0 35 ............................... GGTTGCCGATGCAGCCAACAGCCTGATTGACATCG 742046 31 100.0 36 ............................... ATCAAACGCAAAGGTGAATTTATAGAGGTCAGAAAG 742113 31 100.0 36 ............................... TCGATGTTGTTTCGACGTTCTGCAGACTCGCTTAAG 742180 31 100.0 36 ............................... CTTTTGAGTATCCCTTACTCTGGGGATTTGTTTGCG 742247 31 100.0 34 ............................... AAAGGAGTGTTTGGCTCTAATCCGAGTTGTGCAG 742312 31 100.0 34 ............................... GAATCCATAGTTTTTGTTGGCATATTCAATGTTG 742377 31 100.0 33 ............................... TTTATCAGACCGAATGTTCATTGCAGCCTGCGG 742441 31 74.2 23 .....................NATCCAT.G. TTTTGTTGGCATATTCAATGTTG Deletion [742495] 742495 31 100.0 33 ............................... TTTATCAGACCGAATGTTCATTGCAGCCTGCGG 742559 31 100.0 34 ............................... TGATATGGCAACCGGGTTTTCGCCTTTTGTTGTG 742624 31 100.0 83 ............................... ATCCAAGAGCAAGGGCAATCCTCATTTACGCATGCGTGGATTGAAATCGCGTCAGCACCGTGATGTTCTCGGCGTATTGGTCG 742738 31 93.5 0 ......................A......G. | ========== ====== ====== ====== =============================== =================================================================================== ================== 31 31 99.0 36 TCGCTCCCCATGCGGGAGCGTGGATTGAAAT # Left flank : TGTTCATGGGCGTTCCTACACGGCTTGGGGCTGGCGGGATTGAGCAGATTTTTGAACTGGAGCTGACGTCTGAAGAGAAGGCTGCGTTGGATAAATCGGCAGAATCTGTACGTGACGTAACGAATATCATTACAGTCTAAGTTGCGGTAAATGTTGAAGGGAAGAGCACCCGGAAGCCATTGAAGGCTTTCGGGTGCTTTTTTTTGTATGCAGAAAACAAGGGTTTTGAAAAAGGATAGAGAATCTTGAAAGAGGAACCCTGGTGCTGCTATTGATCTTGTCATTCAATTTGAATATGAAAATATGGGTTTTGTTGCGTCGTAAACGGCGGTGCGAATGTATAGCTCACATGAAAACCCCGGGTCCTCCGCACCAGGAAAATTACATTAAATGTATATTTTAATTGGTGGAAGAATGGGTTTAACCTTTTGACCAGGGTTAAAGAGTGAATTTTCGCCCATAAAAAGGGGTTTTACCTTTTTTATGGGCGAAAATCGCTG # Right flank : TTTCTAAGGTTTGATTTCTTAAACGTTTGAGTTGGCCGCTCCCCATACCCCACCAGTTGCCCCTAACAATCCATTCCCTTTTCCCAAAACAACCTTCCAATTTCAGCCCGATATCCTTTTCTTGGCTATTGATATTGGGTATAATTGATAGAGATATAACTTTTATCACAATGAAAATAGGAGGAGGTAGATTATGGACGGGAAGGTTTTGTTTTTCTTACATATGATCGGGACTCTGGCGTTGGGATTTTATCTGGTGCTGCCTTTTATTCTGGGCCGTGCGGAGAAGCTGTCACCGGCTGCCAAAGAAGGTACGCTTAGCGCGATTGGCGGTTTTAACCGTTTTGCCCAGTACGGGTTGGTTATTCAACTGCTGACGGGTGGTTACATGATGACCAAAGGCGAGTACTCCGTACCGTGGATGATTATCGTGGTTGTGCTATTGCTGGCGATGTTTGCTCTGGGTGGCATTATGAGCAAGCCGCTGCGTCTGGCCGCTG # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCTCCCCATGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 34061-35558 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAQW01000005.1 Bacillus sp. FJAT-27264 scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 34061 32 100.0 36 ................................ TGCCTGAGCGTTGTTCTGCTCTGACTGTTGCAATTG 34129 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34196 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34263 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34330 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34397 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34464 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34531 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34598 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34665 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34732 32 100.0 35 ................................ TAATGCTCCAGTTGTTCATAACGCAAGTCGCTCCG 34799 32 100.0 34 ................................ AAAAGAGGATGGGTCTACTGGTTTTAAATTAGGT 34865 32 100.0 33 ................................ TACAGATCATGATCCTACAAGCAGACATGTGTA 34930 32 100.0 33 ................................ ACCAATCAAACGCTGATCTTCGATAGGTGTTGT 34995 32 100.0 34 ................................ ACTTTAAAAGGGCCGCGTCCTTGCGCTGCTTGAT 35061 32 100.0 33 ................................ CTTAACGCCGGAACAGATAGAAGAAATCAAAAG 35126 32 100.0 36 ................................ TACGAGAGTTTGATTTTATATGGGCATCACCACCAT 35194 32 100.0 34 ................................ AATTCTTCCTGTAAAGTTGTAAAGGAACTCTCTG 35260 32 100.0 34 ................................ CTCGAATCTCCATGAACGGAGGATTCAGATATAA 35326 32 100.0 35 ................................ TAAATGAGTGAAAGAGCTGATAAAACGCAGAAGCT 35393 32 96.9 35 ....................A........... TTGATGGCGAAGTAAGCGTTATAGCCGACGTACTC 35460 32 100.0 35 ................................ TCTACGCTACGAATCTTCGTTTGGAAGTCGTGTTC 35527 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 23 32 99.9 35 GTCGCTCCCTACGCGGGAGCGTGGATTGAAAT # Left flank : GACTCTGATCCTGGCCTCGATATTATTGTTTTCTGGGAGACACTAAAGTGTCTTGCAACAGAACTTGATGTTACGGCTGATTCACACACTAATTCTAAGGATGTCCAGCGTTTGCTCTATAAAACAGAAGATATTCTTTGCCGGTTGTCACAGCGTGTGTATAAAGAACCAGCGAGGTGGTATCAGAGGGTACGAAGAGAGGATAGTAGTCTTTAGGGAGATAGCAGTGCTAAGCCAACTTTACTTTTTTGGGATATGAAGAGGGATTCTACATATTGGAAAAGAAATAGTATTAAGGAGATAATCCTGCTATCAAGTGGGGAAAATCCGAGTGCGAATGTATAGCTCACATGAAAATCCCGGGTCCTCCGCACCAATATTTTTACATTATTTGTGTGAAAAAAACCAAGGATGCTGATATGAGAGTTTATATTGAAGAGATTTGGTGCGATTTAGGTGTATAAAAAGGTTTTTTACCCTTTTTATGGTTTAAAATCGCT # Right flank : TAAGAACTGGGATATCTGCGTTTTGCAGACTCTCGTCGTTCCCTGTGCAGAAGCGTGAGCTAAGCGTAATATGAATTACGTTCCAAAAGAGGGGTTTAAAATGTTGTTTTGTAAATTAATTCGAATTAGAACATGGTATCAGCAGCATTATTCCTCTATTTTTTTAACATAAAATAGTTAGTAGATAGTCTTGAAAATATACGTACAAACAATATATAATCTCTCACTCTGGATACTGATTTAAAGTGAGGGATTTTCTTTTTATAAAATTACTTACTGAATAAAGAGGATAATGATGGAAAAAGTCGAAAAAAGTAATAATCCAGGATTATTTTATCTTGTTAAATAAGTTTTTATGTCTTGATGAGTAAAATCTATTTTTGAGTTGAGTTTTTTTGATCTTAAAATACTAGAAACTAACAGTAATAAATTTCGACTAGCAGAGGAGGAAAGAATCGTGCCTAGAAAGATAGGATCAATTCCAAAAGTTACTTGTGTAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 43884-45236 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAQW01000005.1 Bacillus sp. FJAT-27264 scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 43884 32 100.0 32 ................................ AATCCTTAAATGGGATTTAATAGTATTAATTT 43948 32 100.0 35 ................................ TTTGTCTATCAATTTATACCCGACAGTAGCCATAT 44015 32 100.0 36 ................................ TAAATTTAATCTGTCGGTTGCTATTATTCTTGATTT 44083 32 100.0 35 ................................ ACCACATTTTTGAGCAGTTTCAATTGTAAGCTTTC 44150 32 100.0 34 ................................ GTACAAATGCACTTAAACTCATTCGACAAACTTG 44216 32 100.0 36 ................................ TTTAAGCAGCCGAACAGGGATATAGTTCGAACCATT 44284 32 100.0 33 ................................ TGTTTTCTCATGCCATTCAAATCCATATTTATC 44349 32 96.9 32 A............................... CCGGAAGTGAAATCCGTAGTGGCTATAGTTGT 44413 32 100.0 32 ................................ TCCCTAAACGATAAAGTCCCAGTCACGATCAC 44477 32 100.0 35 ................................ CGATGTGTCCACCTCATCCCCAAATGCACTCTTCG 44544 31 96.9 36 ....-........................... CGCAGGAACAGCGTTGTAGTCAACGTCGGTGTCGTC 44611 32 100.0 35 ................................ AACAATATAGATTCCACCAATCAGTAGAATCACAT 44678 32 100.0 34 ................................ CCTAACTCCGCCGTCACCTTTTTAATGTCCGCAT 44744 32 100.0 33 ................................ TTCCCCCGCCTCCCGTCGAATACATTAATCAGA 44809 32 100.0 36 ................................ GCTCGATGCGCGCTTTCTGCTTCGTACACCATTCCG 44877 32 96.9 33 .................G.............. AAATTTATGATGTGGGTGTTCGGTCTCTTCCTG 44942 32 100.0 32 ................................ CGCGAATCGTGCGATGTTGTTGGGGAAGTTAC 45006 32 100.0 34 ................................ ATAGTCCGTCCCTGGATCGTACAGCACCCCAAGA 45072 32 100.0 34 ................................ CTCTATCGGCATCATTGATTCCTTTACTGTTAAA 45138 32 93.8 35 ...........TG................... TTTCGTCTGCAATATTTCTTTCGACGATTTTCAGA 45205 32 93.8 0 ...................A..A......... | ========== ====== ====== ====== ================================ ==================================== ================== 21 32 99.0 34 GTCACTCCCTACACGGGAGTGTGGATTGAAAT # Left flank : CAGAGAACCTTTTGAAGATGGGGAGAAATTTGGGTTAGATAAGTATGTTGTCCAAGGTACTGACGGAGAAGATATATCTCTTCTTTCTTTAGCATTTCAACTTAACCAGTTGTTGATGCTGATTAATAATCCATTGCTATTCCCACATCGAGCTTACGCAGATATGTTCAATAAGGAATTATCACAATTAAGTACCTCTGATCGAGGGTGAGATATGAGGTAGTGTCCTCTCTTCAGAAGAGAAATGTCAGACTATCAATAAGATACTCCAGCAAAAGATTACCGTCGCTTAAGAGAAGAACTCGCACCTTTGAATCAAGAGATTTTAATGGTGCGAATGTGATGCTCACATAAAAACCCCGGGTCCTTCGCACTGAATATTTTACATTAATTGTATATTTAGAACGACTGTATTCTATTTTTTATTAAATTGATTAAGAATATAAGTGATTTTTAATGTATTATATGAGAAATAACCCTTTTTATGGTTTATAATCGCA # Right flank : TCAAACCGGGATAAACTCGCGTTCTAGCGTTCTTTACGGCACGATAATAAAAATATGACCCCCCGGGAGTGTGTAATTCGAATACCAAGCGGTAAACATCTCCACAAAAACTGACACTTCCCCCTAAACAGGAGTATGGCATTTAATCCATACTCCTGTTTGTTATCTCCTATCTTGTAAACCAACCCTCTTTTTGACTACAGCTAACCTCATGCAAACTCTCTTCAAACACATTTTTACAAAAAGTTCACCAATACCCTAGATAATTTAGGAAATAAGCAAGGATATTTATATTTTTTGGAGAATTATCTTAATATGAGTAGTTCTGTATCCTTATAAAGGAGGGAACAATGAACTAAATTTATGCCCATGAGTTGTGATTAATCCTTAAAGGAGAGATCGAATGGAAGAATATATCGCTCATATCCGAGAAAGTGACAAGAAAATACAGACTGTTGCTGAACATTTAACGGGTGTAAAAGCTCTGGCAGAGGAATTTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTACACGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 54200-55824 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAQW01000005.1 Bacillus sp. FJAT-27264 scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 54200 32 96.9 35 ....T........................... TCCGCAACCGTCTCTTGCTTTAACTGCGGGTACTC 54267 32 96.9 33 ....T........................... AGGTATCAGCCATTGGGGGCATTCAGAGCAAGA 54332 32 100.0 32 ................................ CAGTTCCCACTGCTCCATGTACATCACCTCCA 54396 32 100.0 36 ................................ AAGACCGCGCTCCATGCTGGTATGATGGGTAATCAG 54464 32 100.0 34 ................................ CGATGTTGATCTCGAGAGAGAAACGAGTCTTTCC 54530 32 100.0 32 ................................ AATTACAACAGAATGAGTTGTATTAAACCGTT 54594 32 100.0 38 ................................ TTTTGCTTCAATAGCTGTTGCCTGTGCCGTACTGACAG 54664 32 100.0 36 ................................ CTCTGGATACAAGACACGGGCGACGAATGGGTAACC 54732 32 100.0 36 ................................ AACAGCGCACCGTTCCGGTTGGACATGGCGGGTAAC 54800 32 100.0 34 ................................ TCGCGGAGTATCGAGCGCGTAAGGCTGGCACGTC 54866 32 100.0 33 ................................ TTGACCGTGACATTTCGATGATGAAAAAGGGCC 54931 32 100.0 33 ................................ TGAAACTGTAACATTGGAAGAAATTGAATCTCA 54996 32 100.0 34 ................................ TTCCGGTGTCAGCCCCTCAATCCAGAGATTGTCC 55062 32 100.0 33 ................................ CTAAATTCTGTTCTGACCATTTCAGCCAGTTGA 55127 32 100.0 36 ................................ GTCGATCACTAGCCGAGTATTCCAGCGGTTATAACA 55195 32 100.0 33 ................................ TTTACAGGGAAATTCAACTTCTTTAAACTATCA 55260 32 96.9 35 ........T....................... TTCAACGGGTGTATTAACAGTTGATGCAGAACAAG 55327 32 100.0 34 ................................ AGAATGCCGATGTAAAAACCGATGTCTGCCGCAC 55393 32 100.0 37 ................................ TCTACGAAGTACTCGTACCCTTCCGGGCTGCCTATGG 55462 32 100.0 34 ................................ ACACTCGATCTAATGCAAGTGATGTTCATATCTT 55528 32 100.0 32 ................................ GCGCCAAGCTAAGGGAGGCATCACCTTATGTA 55592 32 100.0 35 ................................ CATGGGAAAGGTACTGAACGATTGGTTGGGGGCAC 55659 32 100.0 35 ................................ CATGGGAAAGGTACTGAACGATTGGTTGGGGGCAC 55726 32 100.0 35 ................................ CATGGGAAAGGTACTGAACGATTGGTTGGGGGCAC 55793 32 81.2 0 ..............A....T...A..CA.C.. | ========== ====== ====== ====== ================================ ====================================== ================== 25 32 98.9 34 GTCGCTCCCTACGCGGGAGCGTGGATTGAAAT # Left flank : TTCTTTTGAGAGGAACAAGGGATTTTTGGTTCATAAAAAGGTCATTTACCCTTTTTATGGGTAAAAATCGCTGTCGTTCCCTACGCGGGAGCGTGGATTGAAATCTATGTAACGCTTATGATATCAGCGACCTTTATCGTCGTTCCCTACGCGGGAGCGTGGATTGAAATATCCTCGAACACGACCGCGATCTCCGTAAACGCGTCGTTCCCTACGCGGGAGCGTGGATTGAAATATTGATCCGGTCCTTTTATATCGGTTATGAAGTTGTCGTTCCCTACGCGGGAGCGTGGATTGAAATTCCGCAACCGTCTCTTGCTTTAACTGCGGGTACTCGTCGTTCCCTACGCGGGAGCGTGGATTGAAATTTCCAACTCCTCAGTATGTTTTAAAAGCTCACGTCGTTCCCTACGCGGGAGCGTGGATTGAAATAGGTATCAGCCATTGGGGGCATTCAGAGCAAGAGTCGCNTCCGGTCCTTTTATATCGGTTATGAAGTT # Right flank : TTCTATGAGACCACCAGGGAAATAAAGGGAAAAACACCTGTTAAATCTCCTCAAAACGATTGATGCTCAGAATTAACTGGAAAAACACCCGTTATTTCTGAGCGTTTTGCCTCTGAACAGCCTGCAGGTGAAATTTAACTGGAGAAAATACTGTTAATATCTAAATAAAGTTTTTTCACTCCAACAAACCACTTTATAAAGCCAAAGGTAGGCTATGTGTTACAGTTGCCCGGCTTTGGCAATTGTCCTTAAATGCTAGTAACGAGCTAGCCGACATCACTTTAACTTGGTTCTCCCCAACACTTCCTCTTAAACATCCCCTACACCCTACACAGCACCCGAACCTACCTATCCAATGACTCTCCACCCTCCATCTCTGCCTTCTTCCGCGCACGAAAGCGGCGGACCTTCATAAGGTTACCGCAGGCTTTGTCGTCGCAGTATCGTTTGGAGCGGTTGCGGGTATCATCATAGTAGACCCAGAGGCAATCGGCGTTCTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //